PDB: 5653 resultsInfo pagesStatus searchChemie searchBIRD

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5EIL	Computational design of a high-affinity metalloprotein homotrimer containing a metal chelating non-canonical amino acid Descriptor: FE (III) ION, TRI-05 Authors: Sankaran, B, Zwart, P.H, Mills, J.H, Pereira, J.H, Baker, D. Deposit date: 2015-10-30 Release date: 2016-11-16 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Computational design of a homotrimeric metalloprotein with a trisbipyridyl core. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5H1H	NMR structure of SLBA, a chimera of SFTI Descriptor: Bradykinin-trypsin inhibitor secondary loop chimera Authors: Xiao, T, Tam, J.P. Deposit date: 2016-10-10 Release date: 2017-04-19 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: An Orally Active Bradykinin B1 Receptor Antagonist Engineered as a Bifunctional Chimera of Sunflower Trypsin Inhibitor. J. Med. Chem., 60, 2017
5H1I	NMR structure of TIBA, a chimera of SFTI Descriptor: Bradykinin-trypsin inhibitor secondary loop chimera Authors: Xiao, T, Tam, J.P. Deposit date: 2016-10-10 Release date: 2017-04-19 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: An Orally Active Bradykinin B1 Receptor Antagonist Engineered as a Bifunctional Chimera of Sunflower Trypsin Inhibitor. J. Med. Chem., 60, 2017
8BL9	Crystal Structure of Sam0.7 Descriptor: Sam0.7 Authors: Maksymenko, K, ElGamacy, M, Hartmann, M.D. Deposit date: 2022-11-09 Release date: 2024-05-22 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal Structure of Sam0.7 To Be Published
8BL5	Crystal Structure of Sam0.2 Descriptor: Sam0.2 Authors: Maksymenko, K, ElGamacy, M, Hartmann, M.D. Deposit date: 2022-11-09 Release date: 2024-05-22 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Crystal Structure of Sam0.2 To Be Published
4H7R	Crystal structure of a parallel 4-helix coiled coil CC-Hex-II Descriptor: 1,4-DIETHYLENE DIOXIDE, CC-Hex-II, GLYCEROL Authors: Chi, B, Zaccai, N.R, Brady, R.L, Woolfson, D.N. Deposit date: 2012-09-20 Release date: 2014-02-05 Method: X-RAY DIFFRACTION (1.33 Å) Cite: TBA To be Published
5HFY	Backbone Modifications in the Protein GB1 Helix: beta-2-Ala24, beta-3-Lys28, beta-3-Lys31, beta-3-Asn35 Descriptor: Immunoglobulin G-binding protein G Authors: Tavenor, N.A, Reinert, Z.E, Lengyel, G.A, Griffith, B.D, Horne, W.S. Deposit date: 2016-01-07 Release date: 2016-02-24 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Comparison of design strategies for alpha-helix backbone modification in a protein tertiary fold. Chem.Commun.(Camb.), 52, 2016
5HG2	Backbone Modifications in the Protein GB1 Helix: beta-3-Ala24, beta-3-Lys28, beta-3-Lys31, beta-2-Asn35 Descriptor: GLYCEROL, Immunoglobulin G-binding protein G, MAGNESIUM ION Authors: Tavenor, N.A, Reinert, Z.E, Lengyel, G.A, Griffith, B.D, Horne, W.S. Deposit date: 2016-01-07 Release date: 2016-02-24 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Comparison of design strategies for alpha-helix backbone modification in a protein tertiary fold. Chem.Commun.(Camb.), 52, 2016
5HOX	X-ray crystallographic structure of an A-beta 17_36 beta-hairpin. Synchrotron data set. (LVFFAEDCGSNKCAII(SAR)LMV). Descriptor: Amyloid beta A4 protein, O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500) Authors: Kreutzer, A.G, Nowick, J.S, Spencer, R.K. Deposit date: 2016-01-19 Release date: 2016-03-23 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.9 Å) Cite: X-ray Crystallographic Structures of a Trimer, Dodecamer, and Annular Pore Formed by an A beta 17-36 beta-Hairpin. J.Am.Chem.Soc., 138, 2016
5HPN	A circularly permuted PduA forming an icosahedral cage Descriptor: Permuted PduA, SULFATE ION Authors: Leibly, D.J, Jorda, J, Yeates, T.O. Deposit date: 2016-01-20 Release date: 2016-04-06 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.509 Å) Cite: Structure of a novel 13 nm dodecahedral nanocage assembled from a redesigned bacterial microcompartment shell protein. Chem.Commun.(Camb.), 52, 2016
5HRY	Computationally Designed Cyclic Dimer ank3C2_1 Descriptor: ank3C2_1 Authors: Cascio, D, McNamara, D.E, Fallas, J.A, Baker, D, Yeates, T.O. Deposit date: 2016-01-24 Release date: 2017-04-12 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2 Å) Cite: Computational design of self-assembling cyclic protein homo-oligomers. Nat Chem, 9, 2017
5E5V	Structure of amyloid forming peptide NFGAILS (residues 22-28) from Islet Amyloid Polypeptide Descriptor: NFGAILS (22-28) from islet amyloid polypeptide, synthesized Authors: Soriaga, A.B, Macdonald, R, Sawaya, M.R, Sangwan, S, Eisenberg, D. Deposit date: 2015-10-09 Release date: 2015-12-16 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.24 Å) Cite: Crystal Structures of IAPP Amyloidogenic Segments Reveal a Novel Packing Motif of Out-of-Register Beta Sheets. J.Phys.Chem.B, 120, 2016
5E5Z	Structure of the amyloid forming peptide LVHSSN (residues Descriptor: LVHSSN (residues 16-21) from islet amyloid polypeptide Authors: Soriaga, A.B, Eisenberg, D. Deposit date: 2015-10-09 Release date: 2015-12-16 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.664 Å) Cite: Crystal Structures of IAPP Amyloidogenic Segments Reveal a Novel Packing Motif of Out-of-Register Beta Sheets. J.Phys.Chem.B, 120, 2016
5HPP	Crystal structure of a macrocyclic beta-sheet peptide derived from transthyretin (106-121) - (ORN)TIA(MAA)LLS(ORN)S(PHI)STTAV Descriptor: CHLORIDE ION, ORN-THR-ILE-ALA-MAA-LEU-LEU-SER-ORN-SER-PHI-SER-THR-THR-ALA-VAL Authors: Yoo, S, Kreutzer, A.G, Nowick, J.S. Deposit date: 2016-01-20 Release date: 2016-08-10 Last modified: 2019-12-25 Method: X-RAY DIFFRACTION (2.082 Å) Cite: Square channels formed by a peptide derived from transthyretin. Chem Sci, 7, 2016
5HI1	Backbone Modifications in the Protein GB1 Helix: Aib24, beta-3-Lys28, beta-3-Lys31, Aib35 Descriptor: ACETATE ION, Immunoglobulin G-binding protein G Authors: Tavenor, N.A, Reinert, Z.E, Lengyel, G.A, Griffith, B.D, Horne, W.S. Deposit date: 2016-01-11 Release date: 2016-02-24 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Comparison of design strategies for alpha-helix backbone modification in a protein tertiary fold. Chem.Commun.(Camb.), 52, 2016
2LNY	ShB peptide structure bound to negatively charged lipid-bilayer after Molecular Dynamics refinement Descriptor: ShB peptide Authors: Weingarth, M. Deposit date: 2012-01-06 Release date: 2012-08-08 Last modified: 2024-05-15 Method: SOLID-STATE NMR Cite: Supramolecular structure of membrane-associated polypeptides by combining solid-state NMR and molecular dynamics simulations. Biophys.J., 103, 2012
7Q5R	Protein community member pyruvate dehydrogenase complex E2 core from C. thermophilum Descriptor: Acetyltransferase component of pyruvate dehydrogenase complex Authors: Chojnowski, G, Skalidis, I, Kyrilis, F.L, Tueting, C, Hamdi, F, Kastritis, P.L. Deposit date: 2021-11-04 Release date: 2022-02-02 Last modified: 2023-12-13 Method: ELECTRON MICROSCOPY (3.84 Å) Cite: Cryo-EM and artificial intelligence visualize endogenous protein community members. Structure, 30, 2022
7Q5Q	Protein community member oxoglutarate dehydrogenase complex E2 core from C. thermophilum Descriptor: Dihydrolipoyllysine-residue succinyltransferase Authors: Chojnowski, G, Skalidis, I, Kyrilis, F.L, Tueting, C, Hamdi, F, Kastritis, P.L. Deposit date: 2021-11-04 Release date: 2022-02-02 Last modified: 2023-12-13 Method: ELECTRON MICROSCOPY (4.38 Å) Cite: Cryo-EM and artificial intelligence visualize endogenous protein community members. Structure, 30, 2022
7Q5S	Protein community member fatty acid synthase complex from C. thermophilum Descriptor: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, 3-oxoacyl-[acyl-carrier-protein] reductase Authors: Chojnowski, G, Skalidis, I, Kyrilis, F.L, Tueting, C, Hamdi, F, Kastritis, P.L. Deposit date: 2021-11-04 Release date: 2022-02-02 Last modified: 2023-12-13 Method: ELECTRON MICROSCOPY (4.47 Å) Cite: Cryo-EM and artificial intelligence visualize endogenous protein community members. Structure, 30, 2022
4QFV	Crystal structure of a unique ankyrin Descriptor: ACETATE ION, ANK-N5C-281 Authors: Ethayathulla, A.S, Tikhonova, E.B, Guan, L. Deposit date: 2014-05-21 Release date: 2015-05-06 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.999 Å) Cite: A transcription blocker isolated from a designed repeat protein combinatorial library by in vivo functional screen. Sci Rep, 5, 2015
6ANM	Structure of D-Leu-D-Phe-2-Abz-D-Ala at 0.64 Angstrom Descriptor: DLE-DPN-BE2-DAL Authors: Cameron, A.J, Sarojini, V, Squire, C.J. Deposit date: 2017-08-14 Release date: 2017-11-15 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (0.64 Å) Cite: Crystal and NMR Structures of a Peptidomimetic beta-Turn That Provides Facile Synthesis of 13-Membered Cyclic Tetrapeptides. Chem Asian J, 12, 2017
4Q8D	Crystal structure of a macrocyclic beta-sheet peptide containing two beta-strands from amyloid beta residues 15-23 Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, macrocyclic beta-sheet peptide incorporating residues amyloid beta 15-23 Authors: Pham, J.D, Spencer, R.K, Chen, K.H, Nowick, J.S. Deposit date: 2014-04-26 Release date: 2014-08-13 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.746 Å) Cite: A Fibril-Like Assembly of Oligomers of a Peptide Derived from beta-Amyloid. J.Am.Chem.Soc., 136, 2014
5TXD	Structure of amyloid-beta derived peptide - NKGAIF Descriptor: Amyloid beta A4 protein, PHOSPHATE ION Authors: Sangwan, S, Sawaya, M.R, Eisenberg, D. Deposit date: 2016-11-16 Release date: 2017-11-15 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.452 Å) Cite: Distal amyloid beta-protein fragments template amyloid assembly. Protein Sci., 27, 2018
5TXH	Polymorphic form 2 of amyloid-beta derived peptide - IFAEDV Descriptor: IFAEDV, ISOPROPYL ALCOHOL Authors: Sangwan, S, Sawaya, M.R, Eisenberg, D. Deposit date: 2016-11-16 Release date: 2017-11-15 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Distal amyloid beta-protein fragments template amyloid assembly. Protein Sci., 27, 2018
3FAA	Crystal structure of TGFbRI complexed with a 2-aminoimidazole inhibitor Descriptor: N-[4-(5-fluoro-6-methylpyridin-2-yl)-5-quinoxalin-6-yl-1H-imidazol-2-yl]acetamide, PHOSPHATE ION, TGF-beta receptor type-1 Authors: Boriack-Sjodin, P.A, Fitch, C. Deposit date: 2008-11-16 Release date: 2009-01-27 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (3.35 Å) Cite: 2-Aminoimidazoles inhibitors of TGF-beta receptor 1. Bioorg.Med.Chem.Lett., 19, 2009

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