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4KEX
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BU of 4kex by Molmil
Crystal structure analysis of a single amino acid deletion mutation in EGFP
Descriptor: Green fluorescent protein
Authors:Arpino, J.A.J, Rizkallah, P.J.
Deposit date:2013-04-26
Release date:2014-08-06
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and dynamic changes associated with beneficial engineered single-amino-acid deletion mutations in enhanced green fluorescent protein.
Acta Crystallogr.,Sect.D, 70, 2014
6RUM
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BU of 6rum by Molmil
Crystal structure of GFP-LAMA-G97 - a GFP enhancer nanobody with cpDHFR insertion and TMP and NADPH
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GFP-LAMA-G97 a GFP enhancer nanobody with cpDHFR insertion, ...
Authors:Farrants, H, Tarnawski, M, Mueller, T.G, Otsuka, S, Hiblot, J, Koch, B, Kueblbeck, M, Kraeusslich, H.-G, Ellenberg, J, Johnsson, K.
Deposit date:2019-05-28
Release date:2020-02-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Chemogenetic Control of Nanobodies.
Nat.Methods, 17, 2020
6YLM
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BU of 6ylm by Molmil
mCherry
Descriptor: CHLORIDE ION, mCherry
Authors:Myskova, J, Rybakova, M, Brynda, J, Lazar, J.
Deposit date:2020-04-07
Release date:2020-12-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Directionality of light absorption and emission in representative fluorescent proteins.
Proc.Natl.Acad.Sci.USA, 117, 2020
3BE4
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BU of 3be4 by Molmil
Crystal structure of Cryptosporidium parvum adenylate kinase cgd5_3360
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, GLYCEROL, ...
Authors:Wernimont, A.K, Lew, J, Kozieradzki, I, Lin, Y.H, Sun, X, Khuu, C, Zhao, Y, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bochkarev, A, Hui, R, Artz, J.D, Amani, M, Structural Genomics Consortium (SGC)
Deposit date:2007-11-16
Release date:2007-12-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Cryptosporidium parvum adenylate kinase cgd5_3360.
To be Published
7ODC
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BU of 7odc by Molmil
CRYSTAL STRUCTURE ORNITHINE DECARBOXYLASE FROM MOUSE, TRUNCATED 37 RESIDUES FROM THE C-TERMINUS, TO 1.6 ANGSTROM RESOLUTION
Descriptor: PROTEIN (ORNITHINE DECARBOXYLASE), PYRIDOXAL-5'-PHOSPHATE
Authors:Kern, A.D, Oliveira, M.A, Coffino, P, Hackert, M.L.
Deposit date:1999-03-03
Release date:1999-10-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of mammalian ornithine decarboxylase at 1.6 A resolution: stereochemical implications of PLP-dependent amino acid decarboxylases.
Structure Fold.Des., 7, 1999
6S36
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BU of 6s36 by Molmil
Crystal structure of E. coli Adenylate kinase R119K mutant
Descriptor: Adenylate kinase, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2019-06-24
Release date:2019-08-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Nucleation of an Activating Conformational Change by a Cation-pi Interaction.
Biochemistry, 58, 2019
5T3I
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BU of 5t3i by Molmil
cyan fluorescence protein soaked with selenourea for 5 min
Descriptor: Green fluorescent protein, PHOSPHATE ION, selenourea
Authors:Luo, Z, Dauter, Z.
Deposit date:2016-08-25
Release date:2016-11-30
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures.
Sci Rep, 6, 2016
3DQ2
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BU of 3dq2 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 1: Structure 23 in a Series of 26 High Pressure Structures
Descriptor: Green fluorescent protein
Authors:Barstow, B, Kim, C.U.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
8IHX
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BU of 8ihx by Molmil
X-ray crystal structure of N372D mutant of endo-1,4-beta glucanase from Eisenia fetida
Descriptor: CALCIUM ION, Endoglucanase, GLYCEROL, ...
Authors:Kuroki, C, Hirano, Y, Nakazawa, M, Sakamoto, T, Tamada, T, Ueda, M.
Deposit date:2023-02-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A single mutation Asp43Arg was increased 2.5-fold the catalytic activity and maintained the stability of cold-adapted endo-1,4-beta glucanase (Ef-EG2) from Eisenia fetida.
Curr Res Biotechnol, 5, 2023
8IHY
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BU of 8ihy by Molmil
X-ray crystal structure of Q387E mutant of endo-1,4-beta glucanase from Eisenia fetida
Descriptor: CALCIUM ION, Endoglucanase, GLYCEROL, ...
Authors:Kuroki, C, Hirano, Y, Nakazawa, M, Sakamoto, T, Tamada, T, Ueda, M.
Deposit date:2023-02-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A single mutation Asp43Arg was increased 2.5-fold the catalytic activity and maintained the stability of cold-adapted endo-1,4-beta glucanase (Ef-EG2) from Eisenia fetida.
Curr Res Biotechnol, 5, 2023
3DQ6
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BU of 3dq6 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1920 Atmospheres Number 2: Structure 18 in a Series of 26 High Pressure Structures
Descriptor: Green fluorescent protein
Authors:Barstow, B, Kim, C.U.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1KSD
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BU of 1ksd by Molmil
The structure of Endoglucanase from termite, Nasutitermes takasagoensis, at pH 6.5.
Descriptor: CALCIUM ION, Endo-b-1,4-glucanase
Authors:Khademi, S, Guarino, L.A, Watanabe, H, Tokuda, G, Meyer, E.F.
Deposit date:2002-01-12
Release date:2003-01-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of an endoglucanase from termite, Nasutitermes takasagoensis.
Acta Crystallogr.,Sect.D, 58, 2002
3U0N
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BU of 3u0n by Molmil
Crystal structure of the engineered fluorescent protein mRuby, crystal form 2
Descriptor: SULFATE ION, mRuby
Authors:Akerboom, J, Looger, L.L, Schreiter, E.R.
Deposit date:2011-09-28
Release date:2012-10-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.
Front Mol Neurosci, 6, 2013
1ZIN
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BU of 1zin by Molmil
ADENYLATE KINASE WITH BOUND AP5A
Descriptor: ADENYLATE KINASE, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION
Authors:Berry, M.B, Phillips Jr, G.N.
Deposit date:1996-06-07
Release date:1997-06-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of Bacillus stearothermophilus adenylate kinase with bound Ap5A, Mg2+ Ap5A, and Mn2+ Ap5A reveal an intermediate lid position and six coordinate octahedral geometry for bound Mg2+ and Mn2+.
Proteins, 32, 1998
8AAB
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BU of 8aab by Molmil
S148F mutant of blue-to-red fluorescent timer mRubyFT
Descriptor: mRubyFT S148F mutant of blue-to-red fluorescent timer
Authors:Boyko, K.M, Nikolaeva, A.Y, Vlaskina, A.V, Dorovatovskii, P.V, Subach, O.M, Popov, V.O, Subach, F.V.
Deposit date:2022-06-30
Release date:2022-08-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:mRubyFT/S147I, a mutant of blue-to-red fluorescent timer
Crystallography Reports, 2022
2G6Y
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BU of 2g6y by Molmil
Crystal structure of the novel green fluorescent protein from marine copepod Pontellina plumata
Descriptor: green fluorescent protein 2
Authors:Evdokimov, A.G, Pokross, M.E, Chudakov, D.M.
Deposit date:2006-02-26
Release date:2006-03-28
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for the fast maturation of Arthropoda green fluorescent protein.
Embo Rep., 7, 2006
2AWJ
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BU of 2awj by Molmil
GFP R96M pre-cyclized intermediate in chromophore formation
Descriptor: MAGNESIUM ION, green-fluorescent protein
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-09-01
Release date:2006-04-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
5AZB
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BU of 5azb by Molmil
Crystal structure of Escherichia coli Lgt in complex with phosphatidylglycerol and the inhibitor palmitic acid
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, PALMITIC ACID, Prolipoprotein diacylglyceryl transferase, ...
Authors:Zhang, X.C, Mao, G, Zhao, Y.
Deposit date:2015-09-30
Release date:2016-01-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of E. coli lipoprotein diacylglyceryl transferase
Nat Commun, 7, 2016
2HGD
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BU of 2hgd by Molmil
Structure of S65A Y66F GFP variant with an oxidized chromophore
Descriptor: Green fluorescent protein
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-06-26
Release date:2007-03-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis
J.Am.Chem.Soc., 129, 2007
3AI4
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BU of 3ai4 by Molmil
Crystal structure of yeast enhanced green fluorescent protein - mouse polymerase iota ubiquitin binding motif fusion protein
Descriptor: SULFATE ION, yeast enhanced green fluorescent protein,DNA polymerase iota
Authors:Suzuki, N, Wakatsuki, S, Kawasaki, M.
Deposit date:2010-05-10
Release date:2010-09-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallization of small proteins assisted by green fluorescent protein
Acta Crystallogr.,Sect.D, 66, 2010
4LQU
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BU of 4lqu by Molmil
1.60A resolution crystal structure of a superfolder green fluorescent protein (W57G) mutant
Descriptor: Green fluorescent protein
Authors:Lovell, S, Xia, Y, Vo, B, Battaile, K.P, Egan, C, Karanicolas, J.
Deposit date:2013-07-19
Release date:2013-12-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation.
J.Am.Chem.Soc., 135, 2013
3WUP
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BU of 3wup by Molmil
Crystal Structure of the Ubiquitin-Binding Zinc Finger (UBZ) Domain of the Human DNA Polymerase Eta
Descriptor: CHLORIDE ION, DNA polymerase eta, GLYCEROL, ...
Authors:Suzuki, N, Wakatsuki, S, Kawasaki, S.
Deposit date:2014-05-01
Release date:2015-06-17
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 283, 2016
4W6T
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BU of 4w6t by Molmil
Crystal Structure of Full-Length Split GFP Mutant E115H/T118H With Copper Mediated Crystal Contacts, P 43 21 2 Space Group
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, COPPER (II) ION, ...
Authors:Leibly, D.J, Waldo, G.S, Yeates, T.O.
Deposit date:2014-08-20
Release date:2015-02-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.604 Å)
Cite:A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
6HOK
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BU of 6hok by Molmil
Structure of Beclin1 LIR (S96E) motif bound to GABARAP
Descriptor: 1,2-ETHANEDIOL, Beclin-1,Gamma-aminobutyric acid receptor-associated protein
Authors:Mouilleron, S, Birgisdottir, A.B, Bhujbal, Z, Wirth, M, Sjottem, E, Evjen, G, Zhang, W, Lee, R, O'Reilly, N, Tooze, S, Lamark, T, Johansen, T.
Deposit date:2018-09-17
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Members of the autophagy class III phosphatidylinositol 3-kinase complex I interact with GABARAP and GABARAPL1 via LIR motifs.
Autophagy, 15, 2019
3G9A
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BU of 3g9a by Molmil
Green fluorescent protein bound to minimizer nanobody
Descriptor: Green fluorescent protein, Minimizer
Authors:Kirchhofer, A, Helma, J, Schmidthals, K, Frauer, C, Cui, S, Karcher, A, Pellis, M, Muyldermans, S, Delucci, C.C, Cardoso, M.C, Leonhardt, H, Hopfner, K.-P, Rothbauer, U.
Deposit date:2009-02-13
Release date:2009-12-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.614 Å)
Cite:Modulation of protein properties in living cells using nanobodies
Nat.Struct.Mol.Biol., 17, 2010

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数据于2024-06-26公开中

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