Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8TZQ
DownloadVisualize
BU of 8tzq by Molmil
CryoEM structure of D2 dopamine receptor in complex with GoA KE Mutant, scFv16, and dopamine
Descriptor: D(2) dopamine receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Krumm, B.E, Kapolka, N.J, Fay, J.F, Roth, B.L.
Deposit date:2023-08-27
Release date:2024-08-21
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A neurodevelopmental disorder mutation locks G proteins in the transitory pre-activated state.
Nat Commun, 15, 2024
8U02
DownloadVisualize
BU of 8u02 by Molmil
CryoEM structure of D2 dopamine receptor in complex with GoA KE mutant and dopamine
Descriptor: D(2) dopamine receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Krumm, B.E, Kapolka, N.J, Fay, J.F, Roth, B.L.
Deposit date:2023-08-28
Release date:2024-08-21
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:A neurodevelopmental disorder mutation locks G proteins in the transitory pre-activated state.
Nat Commun, 15, 2024
8PNT
DownloadVisualize
BU of 8pnt by Molmil
Structure of the human nuclear cap-binding complex bound to PHAX and m7G-capped RNA
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, Nuclear cap-binding protein subunit 1, Nuclear cap-binding protein subunit 2, ...
Authors:Dubiez, E, Pellegrini, E, Foucher, A.E, Cusack, S, Kadlec, J.
Deposit date:2023-07-01
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structural basis for competitive binding of productive and degradative co-transcriptional effectors to the nuclear cap-binding complex.
Cell Rep, 43, 2024
8UF4
DownloadVisualize
BU of 8uf4 by Molmil
Crystal structure of wildtype dystroglycan proteolytic domain (juxtamembrane domain)
Descriptor: Beta-dystroglycan, CALCIUM ION, CHLORIDE ION, ...
Authors:Anderson, M.J.M, Shi, K, Hayward, A.N, Uhlens, C, Evans III, R.L, Grant, E, Greenberg, L, Aihara, H, Gordon, W.R.
Deposit date:2023-10-03
Release date:2024-09-11
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Molecular basis of proteolytic cleavage regulation by the extracellular matrix receptor dystroglycan.
Structure, 32, 2024
7NWG
DownloadVisualize
BU of 7nwg by Molmil
Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
Descriptor: 18S Ribosomal RNA, 28S Ribosomal RNA, 40S ribosomal protein S10, ...
Authors:Powers, K.T, Yadav, S.K.N, Bufton, J.C, Schaffitzel, C.
Deposit date:2021-03-16
Release date:2021-07-07
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Blasticidin S inhibits mammalian translation and enhances production of protein encoded by nonsense mRNA.
Nucleic Acids Res., 49, 2021
7PUJ
DownloadVisualize
BU of 7puj by Molmil
Crystal structure of Endoglycosidase E GH18 domain from Enterococcus faecalis
Descriptor: Beta-N-acetylhexosaminidase, CHLORIDE ION, ZINC ION
Authors:Garcia-Alija, M, Du, J.J, Trastoy, B, Sundberg, E.J, Guerin, M.E.
Deposit date:2021-09-30
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Mechanism of cooperative N-glycan processing by the multi-modular endoglycosidase EndoE.
Nat Commun, 13, 2022
7NL0
DownloadVisualize
BU of 7nl0 by Molmil
Cryo-EM structure of the Lin28B nucleosome core particle
Descriptor: DNA (131-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Roberts, G.A, Ozkan, B, Gachulincova, I, O Dwyer, M.R, Hall-Ponsele, E, Saxena, M, Robinson, P.J, Soufi, A.
Deposit date:2021-02-19
Release date:2021-08-11
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Dissecting OCT4 defines the role of nucleosome binding in pluripotency.
Nat.Cell Biol., 23, 2021
8UGM
DownloadVisualize
BU of 8ugm by Molmil
FphE, Staphylococcus aureus fluorophosphonate-binding serine hydrolases E, boronic acid-based compound Z27 bound
Descriptor: 1-benzothiophen-3-ylboronic acid, CALCIUM ION, Fluorophosphonate-binding serine hydrolase E
Authors:Fellner, M.
Deposit date:2023-10-05
Release date:2024-10-16
Last modified:2025-06-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Identification of covalent inhibitors of Staphylococcus aureus serine hydrolases important for virulence and biofilm formation.
Nat Commun, 16, 2025
8UIX
DownloadVisualize
BU of 8uix by Molmil
FphE, Staphylococcus aureus fluorophosphonate-binding serine hydrolases E, boronic acid-based compound Y43 bound
Descriptor: (3,5-dimethoxyphenyl)boronic acid, Fluorophosphonate-binding serine hydrolase E
Authors:Fellner, M.
Deposit date:2023-10-10
Release date:2024-10-23
Last modified:2025-06-25
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Identification of covalent inhibitors of Staphylococcus aureus serine hydrolases important for virulence and biofilm formation.
Nat Commun, 16, 2025
8B5Q
DownloadVisualize
BU of 8b5q by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UMP
Descriptor: UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-MONOPHOSPHATE
Authors:Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
Deposit date:2022-09-24
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
8B62
DownloadVisualize
BU of 8b62 by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UDP-galactose
Descriptor: GALACTOSE-URIDINE-5'-DIPHOSPHATE, GLYCEROL, UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG
Authors:Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
Deposit date:2022-09-25
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
8B63
DownloadVisualize
BU of 8b63 by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UDP-GalNAc
Descriptor: ACETATE ION, UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-DIPHOSPHATE, ...
Authors:Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
Deposit date:2022-09-25
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
8B5S
DownloadVisualize
BU of 8b5s by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UDP-glucose
Descriptor: UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-DIPHOSPHATE, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
Deposit date:2022-09-24
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
8VAQ
DownloadVisualize
BU of 8vaq by Molmil
Structure of the E. coli clamp loader bound to the beta clamp in a Closed-DNA1 conformation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ...
Authors:Landeck, J.T, Kelch, B.A.
Deposit date:2023-12-11
Release date:2024-03-27
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication.
J.Biol.Chem., 300, 2024
8VAP
DownloadVisualize
BU of 8vap by Molmil
Structure of the E. coli clamp loader bound to the beta clamp in a Fully-Open conformation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ...
Authors:Landeck, J.T, Kelch, B.A.
Deposit date:2023-12-11
Release date:2024-03-27
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication.
J.Biol.Chem., 300, 2024
8VAM
DownloadVisualize
BU of 8vam by Molmil
Structure of the E. coli clamp loader bound to the beta clamp in a Semi-Open conformation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ...
Authors:Landeck, J.T, Kelch, B.A.
Deposit date:2023-12-11
Release date:2024-03-27
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication.
J.Biol.Chem., 300, 2024
8VAS
DownloadVisualize
BU of 8vas by Molmil
Structure of the E. coli clamp loader bound to the beta clamp in an Altered-Collar conformation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ...
Authors:Landeck, J.T, Kelch, B.A.
Deposit date:2023-12-11
Release date:2024-03-27
Last modified:2024-12-25
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication.
J.Biol.Chem., 300, 2024
7NLC
DownloadVisualize
BU of 7nlc by Molmil
Crystallographic structure of human Tsg101 UEV domain in complex with a HEV ORF3 peptide
Descriptor: AMMONIUM ION, CHLORIDE ION, Protein ORF3, ...
Authors:Moschidi, D, Dupre, E, Villeret, V, Hanoulle, X.
Deposit date:2021-02-22
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.398 Å)
Cite:Crystallographic structure of human Tsg101 UEV domain in complex with a HEV ORF3 peptide
To Be Published
8BSP
DownloadVisualize
BU of 8bsp by Molmil
Notum Inhibitor ARUK3006560
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, Palmitoleoyl-protein carboxylesterase NOTUM, ...
Authors:Zhao, Y, Jones, E.Y, Fish, P.
Deposit date:2022-11-26
Release date:2022-12-14
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Designed switch from covalent to non-covalent inhibitors of carboxylesterase Notum activity.
Eur.J.Med.Chem., 251, 2023
8BSR
DownloadVisualize
BU of 8bsr by Molmil
Notum Inhibitor ARUK3006562
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:Zhao, Y, Jones, E.Y, Fish, P.
Deposit date:2022-11-26
Release date:2022-12-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Designed switch from covalent to non-covalent inhibitors of carboxylesterase Notum activity.
Eur.J.Med.Chem., 251, 2023
8BT2
DownloadVisualize
BU of 8bt2 by Molmil
Notum Inhibitor ARUK3004876
Descriptor: 1,2-ETHANEDIOL, 1-[5-chloranyl-4-(trifluoromethyl)-2,3-dihydroindol-1-yl]ethanone, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhao, Y, Jones, E.Y, Fish, P.
Deposit date:2022-11-27
Release date:2022-12-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Designed switch from covalent to non-covalent inhibitors of carboxylesterase Notum activity.
Eur.J.Med.Chem., 251, 2023
8BT7
DownloadVisualize
BU of 8bt7 by Molmil
Notum Inhibitor ARUK3004903
Descriptor: 1,2-ETHANEDIOL, 1-[3,4-bis(chloranyl)-5-methyl-indol-1-yl]ethanone, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhao, Y, Jones, E.Y, Fish, P.
Deposit date:2022-11-28
Release date:2022-12-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Designed switch from covalent to non-covalent inhibitors of carboxylesterase Notum activity.
Eur.J.Med.Chem., 251, 2023
8BT5
DownloadVisualize
BU of 8bt5 by Molmil
Notum Inhibitor ARUK3004877
Descriptor: 1,2-ETHANEDIOL, 1-(4-fluoranylspiro[2~{H}-indole-3,1'-cyclobutane]-1-yl)ethanone, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhao, Y, Jones, E.Y, Fish, P.
Deposit date:2022-11-27
Release date:2022-12-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Designed switch from covalent to non-covalent inhibitors of carboxylesterase Notum activity.
Eur.J.Med.Chem., 251, 2023
8BSQ
DownloadVisualize
BU of 8bsq by Molmil
Notum Inhibitor ARUK3006561
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, Palmitoleoyl-protein carboxylesterase NOTUM, ...
Authors:Zhao, Y, Jones, E.Y, Fish, P.
Deposit date:2022-11-26
Release date:2022-12-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Designed switch from covalent to non-covalent inhibitors of carboxylesterase Notum activity.
Eur.J.Med.Chem., 251, 2023
8BTE
DownloadVisualize
BU of 8bte by Molmil
Notum Inhibitor ARUK3004470
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:Zhao, Y, Jones, E.Y, Fish, P.
Deposit date:2022-11-28
Release date:2022-12-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Designed switch from covalent to non-covalent inhibitors of carboxylesterase Notum activity.
Eur.J.Med.Chem., 251, 2023

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon