PDB: 224004 resultsInfo pagesStatus searchChemie searchBIRD

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1ADO	FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE FROM RABBIT MUSCLE Descriptor: 1,3-DIHYDROXYACETONEPHOSPHATE, ALDOLASE, SULFATE ION Authors: Blom, N.S, Sygusch, J. Deposit date: 1996-12-02 Release date: 1997-12-24 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Product binding and role of the C-terminal region in class I D-fructose 1,6-bisphosphate aldolase. Nat.Struct.Biol., 4, 1997
1AB0	C1G/V32D/F57H MUTANT OF MURINE ADIPOCYTE LIPID BINDING PROTEIN AT PH 4.5 Descriptor: ADIPOCYTE LIPID BINDING PROTEIN Authors: Ory, J, Kane, C, Simpson, M, Banaszak, L, Bernlohr, D. Deposit date: 1997-01-30 Release date: 1997-06-16 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Biochemical and crystallographic analyses of a portal mutant of the adipocyte lipid-binding protein. J.Biol.Chem., 272, 1997
1A4T	SOLUTION STRUCTURE OF PHAGE P22 N PEPTIDE-BOX B RNA COMPLEX, NMR, 20 STRUCTURES Descriptor: 20-MER BASIC PEPTIDE, BOXB RNA Authors: Cai, Z, Gorin, A.A, Frederick, R, Ye, X, Hu, W, Majumdar, A, Kettani, A, Patel, D.J. Deposit date: 1998-02-04 Release date: 1998-04-29 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure of P22 transcriptional antitermination N peptide-boxB RNA complex. Nat.Struct.Biol., 5, 1998
1AGD	ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8-HIV-1 GAG PEPTIDE (GGKKKYKL-INDEX PEPTIDE) Descriptor: B*0801, BETA-2 MICROGLOBULIN, HIV-1 GAG PEPTIDE (GGKKKYKL - INDEX PEPTIDE) Authors: Reid, S.W, Mcadam, S, Smith, K.J, Klenerman, P, O'Callaghan, C.A, Harlos, K, Jakobsen, B.K, Mcmichael, A.J, Bell, J, Stuart, D.I, Jones, E.Y. Deposit date: 1997-03-24 Release date: 1997-06-16 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Antagonist HIV-1 Gag peptides induce structural changes in HLA B8. J.Exp.Med., 184, 1996
1AFZ	SOLUTION NMR STRUCTURE OF AN 11 BASE-PAIR OLIGONUCLEOTIDE FROM THE HUMAN N-RAS PROTOONCOGENE ENCODING FOR AMINO ACIDS 11-13 OF P21, MINIMIZED AVERAGE STRUCTURE Descriptor: DNA (5'-D(*CP*AP*CP*CP*AP*CP*CP*TP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*AP*GP*GP*TP*GP*GP*TP*G)-3') Authors: Zegar, I.S, Stone, M.P. Deposit date: 1997-03-18 Release date: 1997-08-20 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure of an oligodeoxynucleotide containing the human N-ras codon 12 sequence refined from 1H NMR using molecular dynamics restrained by nuclear Overhauser effects. Chem.Res.Toxicol., 9, 1996
1AG3	DUPLEX OLIGODEOXYNUCLEOTIDE CONTAINING PROPANODEOXYGUANOSINE OPPOSITE A TWO-BASE DELETION, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: DNA (5'-D(*AP*TP*CP*GP*CP*PP*CP*GP*GP*CP*AP*TP*G)-3'), DNA (5'-D(*CP*AP*TP*GP*CP*CP*GP*CP*GP*AP*T)-3') Authors: Weisenseel, J.P, Stone, M.P. Deposit date: 1997-03-31 Release date: 1997-07-07 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structure of a duplex oligodeoxynucleotide containing propanodeoxyguanosine opposite a two-base deletion in the (CpG)3 frame shift hotspot of Salmonella typhimurium hisD3052 determined by 1H NMR and restrained molecular dynamics. Biochemistry, 34, 1995
1A66	SOLUTION NMR STRUCTURE OF THE CORE NFATC1/DNA COMPLEX, 18 STRUCTURES Descriptor: CORE NFATC1, DNA (5'-D(*CP*AP*AP*TP*TP*TP*TP*CP*CP*TP*CP*G)-3'), DNA (5'-D(*CP*GP*AP*GP*GP*AP*AP*AP*AP*TP*TP*G)-3') Authors: Zhou, P, Sun, L.J, Doetsch, V, Wagner, G, Verdine, G.L. Deposit date: 1998-03-06 Release date: 1998-06-17 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure of the core NFATC1/DNA complex. Cell(Cambridge,Mass.), 92, 1998
1AFF	DNA QUADRUPLEX CONTAINING GGGG TETRADS AND (T.A).A TRIADS, NMR, 8 STRUCTURES Descriptor: QUADRUPLEX DNA (5'-D(TP*AP*GP*G)-3') Authors: Kettani, A, Bouaziz, S, Wang, W, Jones, R.A, Patel, D.J. Deposit date: 1997-03-06 Release date: 1997-08-20 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Bombyx mori single repeat telomeric DNA sequence forms a G-quadruplex capped by base triads. Nat.Struct.Biol., 4, 1997
1AM9	HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER Descriptor: DNA (5'-D(*CP*AP*TP*GP*AP*GP*AP*TP*CP*AP*CP*CP*CP*CP*AP*CP*T P*GP*CP*AP*A)-3'), DNA (5'-D(*TP*TP*GP*CP*AP*GP*TP*GP*GP*GP*GP*TP*GP*AP*TP*CP*T )-3'), MAGNESIUM ION, ... Authors: Parraga, A, Burley, S.K. Deposit date: 1997-06-25 Release date: 1998-07-10 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Co-crystal structure of sterol regulatory element binding protein 1a at 2.3 A resolution. Structure, 6, 1998
134D	SOLUTION STRUCTURE OF A PURINE(DOT)PURINE(DOT)PYRIMIDINE DNA TRIPLEX CONTAINING G(DOT)GC AND T(DOT)AT TRIPLES Descriptor: DNA TRIPLEX Authors: Patel, D.J, Radhakrishnan, I. Deposit date: 1993-08-30 Release date: 1994-04-30 Last modified: 2024-04-10 Method: SOLUTION NMR Cite: Solution structure of a purine.purine.pyrimidine DNA triplex containing G.GC and T.AT triples. Structure, 1, 1993
105D	SOLUTION STRUCTURES OF THE I-MOTIF TETRAMERS OF D(TCC), D(5MCCT) AND D(T5MCC). NOVEL NOE CONNECTIONS BETWEEN AMINO PROTONS AND SUGAR PROTONS Descriptor: DNA (5'-D(*TP*CP*C)-3') Authors: Leroy, J.-L, Gueron, M. Deposit date: 1994-12-22 Release date: 1995-02-07 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structures of the i-motif tetramers of d(TCC), d(5methylCCT) and d(T5methylCC): novel NOE connections between amino protons and sugar protons. Structure, 3, 1995
106D	Solution structures of the i-motif tetramers of D(TCC), D(5MCCT) and D(T5MCC). Novel NOE connections between amino protons and sugar protons Descriptor: DNA (5'-D(*MCYP*CP*T)-3') Authors: Leroy, J.-L, Gueron, M. Deposit date: 1994-12-22 Release date: 1995-02-07 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structures of the i-motif tetramers of d(TCC), d(5methylCCT) and d(T5methylCC): novel NOE connections between amino protons and sugar protons. Structure, 3, 1995
104D	DNA DUPLEXES FLANKED BY HYBRID DUPLEXES: THE SOLUTION STRUCTURE OF CHIMERIC JUNCTIONS IN Descriptor: DNA/RNA (5'-R(*CP*GP*CP*G)-D(P*TP*AP*TP*AP*CP*GP*CP*G)-3') Authors: Zhu, L, Salazar, M, Reid, B.R. Deposit date: 1994-12-16 Release date: 1995-03-31 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: DNA duplexes flanked by hybrid duplexes: the solution structure of chimeric junctions in [r(cgcg)d(TATACGCG)]2. Biochemistry, 34, 1995
199D	Solution structure of the monoalkylated mitomycin c-DNA complex Descriptor: CARBAMIC ACID 2,6-DIAMINO-5-METHYL-4,7-DIOXO-2,3,4,7-TETRAHYDRO-1H-3A-AZA-CYCLOPENTA[A]INDEN-8-YLMETHYL ESTER, DNA (5'-D(*(DI)P*CP*AP*CP*GP*TP*CP*(DI)P*T)-3'), DNA (5'-D(*AP*CP*GP*AP*CP*GP*TP*GP*C)-3') Authors: Sastry, M, Fiala, R, Lipman, R, Tomasz, M, Patel, D.J. Deposit date: 1994-12-01 Release date: 1995-02-07 Last modified: 2024-03-13 Method: SOLUTION NMR Cite: Solution structure of the monoalkylated mitomycin C-DNA complex. J.Mol.Biol., 247, 1995
171D	SOLUTION STRUCTURE OF A DNA DODECAMER CONTAINING THE ANTI-NEOPLASTIC AGENT ARABINOSYLCYTOSINE: COMBINED USE OF NMR, RESTRAINED MOLECULAR DYNAMICS AND FULL RELAXATION MATRIX REFINEMENT Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') Authors: Schweitzer, B.I, Mikita, T, Kellogg, G.W, Gardner, K.H, Beardsley, G.P. Deposit date: 1994-03-14 Release date: 1994-07-31 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure of a DNA dodecamer containing the anti-neoplastic agent arabinosylcytosine: combined use of NMR, restrained molecular dynamics, and full relaxation matrix refinement. Biochemistry, 33, 1994
1AF1	THE SOLUTION NMR STRUCTURE OF AN R-STYRENE OXIDE ADDUCT AT THE N2 POSITION OF GUANINE OF AN 11 BASE-PAIR OLIGONUCLEOTIDE SEQUENCE CODING FOR AMINO ACIDS 11-13 OF THE PRODUCT OF THE N-RAS PROTOONCOGENE, MINIMIZED AVERAGE STRUCTURE Descriptor: DNA (5'-D(*CP*AP*CP*CP*AP*CP*CP*TP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*AP*GP*GSRP*TP*GP*GP*TP*G)-3') Authors: Zegar, I.S, Stone, M.P. Deposit date: 1997-03-20 Release date: 1997-08-20 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Styrene oxide adducts in an oligodeoxynucleotide containing the human N-ras codon 12 sequence: structural refinement of the minor groove R(12,2)- and S(12,2)-alpha-(N2-guanyl) stereoisomers from 1H NMR. Biochemistry, 35, 1996
1A4X	PYRR, THE BACILLUS SUBTILIS PYRIMIDINE BIOSYNTHETIC OPERON REPRESSOR, HEXAMERIC FORM Descriptor: PYRIMIDINE OPERON REGULATORY PROTEIN PYRR, SULFATE ION Authors: Tomchick, D.R, Turner, R.J, Switzer, R.W, Smith, J.L. Deposit date: 1998-02-08 Release date: 1998-08-05 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Adaptation of an enzyme to regulatory function: structure of Bacillus subtilis PyrR, a pyr RNA-binding attenuation protein and uracil phosphoribosyltransferase. Structure, 6, 1998
1AFX	UGAA EUKARYOTIC RIBOSOMAL RNA TETRALOOP, NMR, 13 STRUCTURES Descriptor: RNA (5'-R(*GP*GP*UP*GP*UP*GP*AP*AP*CP*AP*CP*C)-3') Authors: Butcher, S.E, Dieckmann, T, Feigon, J. Deposit date: 1997-03-15 Release date: 1997-05-15 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure of the loop B domain from the hairpin ribozyme. Nat.Struct.Biol., 6, 1999
1A6B	NMR STRUCTURE OF THE COMPLEX BETWEEN THE ZINC FINGER PROTEIN NCP10 OF MOLONEY MURINE LEUKEMIA VIRUS AND A SEQUENCE OF THE PSI-PACKAGING DOMAIN OF HIV-1, 20 STRUCTURES Descriptor: DNA (5'-D(*AP*CP*GP*CP*C)-3'), ZINC FINGER PROTEIN NCP10, ZINC ION Authors: Schueler, W, Dong, C.-Z, Wecker, K, Roques, B.P. Deposit date: 1998-02-23 Release date: 1999-08-23 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: NMR structure of the complex between the zinc finger protein NCp10 of Moloney murine leukemia virus and the single-stranded pentanucleotide d(ACGCC): comparison with HIV-NCp7 complexes. Biochemistry, 38, 1999
1AGZ	THE SOLUTION NMR STRUCTURE OF AN (R)-A-(N6-ADENYL)-STYRENE OXIDE-RAS61 OLIGODEOXYNUCLEOTIDE MODIFIED AT THE THIRD POSITION OF THE CODON 61 REGION, MINIMIZED AVERAGE STRUCTURE Descriptor: DNA (5'-D(*CP*GP*GP*AP*CP*AP*RP*GP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3') Authors: Feng, B, Stone, M.P. Deposit date: 1997-03-26 Release date: 1997-08-20 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Major groove (R)-alpha-(N6-adenyl)styrene oxide adducts in an oligodeoxynucleotide containing the human N-ras codon 61 sequence: conformations of the R(61,2) and R(61,3) sequence isomers from 1H NMR. Biochemistry, 34, 1995
1A8N	SOLUTION STRUCTURE OF A NA+ CATION STABILIZED DNA QUADRUPLEX CONTAINING G.G.G.G AND G.C.G.C TETRADS FORMED BY G-G-G-C REPEATS OBSERVED IN AAV AND HUMAN CHROMOSOME 19, NMR, 8 STRUCTURES Descriptor: DNA QUADRUPLEX CONTAINING G.G.G.G AND G.C.G.C TETRADS Authors: Kettani, A, Bouaziz, S, Gorin, A, Zhao, H, Jones, R, Patel, D.J. Deposit date: 1998-03-27 Release date: 1998-10-14 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure of a Na cation stabilized DNA quadruplex containing G.G.G.G and G.C.G.C tetrads formed by G-G-G-C repeats observed in adeno-associated viral DNA. J.Mol.Biol., 282, 1998
1AJF	SOLUTION STRUCTURE OF THE P5B STEM LOOP FROM A GROUP I INTRON COMPLEXED WITH COBALT (III) HEXAMMINE, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: COBALT HEXAMMINE(III), RNA (5'-R(*GP*AP*CP*AP*GP*GP*GP*GP*AP*AP*AP*CP*UP*UP*UP*GP*UP*C)-3') Authors: Kieft, J.S, Tinoco Junior, I. Deposit date: 1997-05-02 Release date: 1997-07-07 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure of a metal-binding site in the major groove of RNA complexed with cobalt (III) hexammine. Structure, 5, 1997
3LD8	Structure of JMJD6 and Fab Fragments Descriptor: Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, FE (III) ION, GLYCEROL, ... Authors: Hong, X, Zang, J, White, J, Kappler, J.W, Wang, C, Zhang, G. Deposit date: 2010-01-12 Release date: 2010-08-04 Last modified: 2012-06-20 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Interaction of JMJD6 with single-stranded RNA. Proc.Natl.Acad.Sci.USA, 107, 2010
7SIS	SARS-CoV-2 Spike-derived peptide S976-984 (VLNDILSRL) presented by HLA-A*02:01 Descriptor: ACETATE ION, Beta-2-microglobulin, CADMIUM ION, ... Authors: Szeto, C, Gras, S. Deposit date: 2021-10-14 Release date: 2022-11-23 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1.9 Å) Cite: The impact of SARS-CoV-2 spike mutation on peptide presentation is HLA allomorph-specific Curr Res Struct Biol, 2024
1A30	HIV-1 PROTEASE COMPLEXED WITH A TRIPEPTIDE INHIBITOR Descriptor: HIV-1 PROTEASE, TRIPEPTIDE GLU-ASP-LEU Authors: Louis, J.M, Dyda, F, Nashed, N.T, Kimmel, A.R, Davies, D.R. Deposit date: 1998-01-27 Release date: 1998-04-29 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2 Å) Cite: Hydrophilic peptides derived from the transframe region of Gag-Pol inhibit the HIV-1 protease. Biochemistry, 37, 1998

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