Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3SRI
DownloadVisualize
BU of 3sri by Molmil
Crystal structure of Plasmodium falciparum AMA1 in complex with a 29aa PfRON2 peptide
Descriptor: Apical membrane antigen 1, Rhoptry neck protein 2
Authors:Vulliez-Le Normand, B, Saul, F.A, Bentley, G.A.
Deposit date:2011-07-07
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional insights into the malaria parasite moving junction complex.
Plos Pathog., 8, 2012
3TBF
DownloadVisualize
BU of 3tbf by Molmil
C-terminal domain of glucosamine-fructose-6-phosphate aminotransferase from Francisella tularensis.
Descriptor: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
Authors:Osipiuk, J, Zhou, M, Maltseva, N, Kim, Y, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-08-05
Release date:2011-08-24
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:C-terminal domain of glucosamine-fructose-6-phosphate aminotransferase from Francisella tularensis.
To be Published
5FXU
DownloadVisualize
BU of 5fxu by Molmil
Crystal Structure of Puumala virus Gn glycoprotein ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENVELOPE POLYPROTEIN, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, S, Rissanen, I, Zeltina, A, Hepojoki, J, Raghwani, J, Harlos, K, Pybus, O.G, Huiskonen, J.T, Bowden, T.A.
Deposit date:2016-03-02
Release date:2016-05-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:A Molecular-Level Account of the Antigenic Hantaviral Surface.
Cell Rep., 15, 2016
7RC0
DownloadVisualize
BU of 7rc0 by Molmil
X-ray Structure of SARS-CoV-2 main protease covalently modified by compound GRL-091-20
Descriptor: 3C-like proteinase, 5-chloro-4-methylpyridin-3-yl 1H-indole-4-carboxylate, SODIUM ION
Authors:Mesecar, A.D, Anson, B.A, Ghosh, A.K, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-06
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Indole Chloropyridinyl Ester-Derived SARS-CoV-2 3CLpro Inhibitors: Enzyme Inhibition, Antiviral Efficacy, Structure-Activity Relationship, and X-ray Structural Studies.
J.Med.Chem., 64, 2021
7RC1
DownloadVisualize
BU of 7rc1 by Molmil
X-ray Structure of SARS-CoV main protease covalently modified by compound GRL-0686
Descriptor: 3C-like proteinase, 5-chloropyridin-3-yl 1-(3-nitrobenzene-1-sulfonyl)-1H-indole-5-carboxylate, DIMETHYL SULFOXIDE
Authors:Mesecar, A.D, Anson, B.A, Ghosh, A.K, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-07
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Indole Chloropyridinyl Ester-Derived SARS-CoV-2 3CLpro Inhibitors: Enzyme Inhibition, Antiviral Efficacy, Structure-Activity Relationship, and X-ray Structural Studies.
J.Med.Chem., 64, 2021
7RBZ
DownloadVisualize
BU of 7rbz by Molmil
X-ray Structure of SARS-CoV-2 main protease covalently modified by compound GRL-017-20
Descriptor: 3C-like proteinase, 5-chloropyridin-3-yl 2,3-dihydro-1H-indole-4-carboxylate
Authors:Mesecar, A.D, Anson, B.A, Ghosh, A.K, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-06
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Indole Chloropyridinyl Ester-Derived SARS-CoV-2 3CLpro Inhibitors: Enzyme Inhibition, Antiviral Efficacy, Structure-Activity Relationship, and X-ray Structural Studies.
J.Med.Chem., 64, 2021
5GDS
DownloadVisualize
BU of 5gds by Molmil
HIRUNORMS ARE TRUE HIRUDIN MIMETICS. THE CRYSTAL STRUCTURE OF HUMAN ALPHA-THROMBIN:HIRUNORM V COMPLEX
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-THROMBIN, HIRUNORM V
Authors:De Simone, G, Lombardi, A, Galdiero, S, Nastri, F, Della Morte, R, Staiano, N, Pedone, C, Bolognesi, M, Pavone, V.
Deposit date:1997-07-17
Release date:1998-01-21
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Hirunorms are true hirudin mimetics. The crystal structure of human alpha-thrombin-hirunorm V complex.
Protein Sci., 7, 1998
7RTG
DownloadVisualize
BU of 7rtg by Molmil
Crystal Structure of the Human Adenosine Deaminase 1
Descriptor: Adenosine deaminase, ZINC ION
Authors:Ma, M.T, Lieberman, R.L, Blazeck, J, Jennings, M.R.
Deposit date:2021-08-13
Release date:2022-01-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.591 Å)
Cite:Catalytically active holo Homo sapiens adenosine deaminase I adopts a closed conformation.
Acta Crystallogr D Struct Biol, 78, 2022
6HUL
DownloadVisualize
BU of 6hul by Molmil
Sulfolobus solfataricus Tryptophan Synthase AB Complex
Descriptor: PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, SERINE, ...
Authors:Fleming, J.R, Mayans, O.
Deposit date:2018-10-08
Release date:2018-11-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Evolutionary Morphing of Tryptophan Synthase: Functional Mechanisms for the Enzymatic Channeling of Indole.
J.Mol.Biol., 430, 2018
7PQO
DownloadVisualize
BU of 7pqo by Molmil
Catalytic fragment of MASP-1 in complex with P1 site mutant ecotin
Descriptor: Ecotin, GLYCEROL, Mannan-binding lectin serine protease 1, ...
Authors:Harmat, V, Fodor, K, Heja, D.
Deposit date:2021-09-17
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:Synergy of protease-binding sites within the ecotin homodimer is crucial for inhibition of MASP enzymes and for blocking lectin pathway activation.
J.Biol.Chem., 298, 2022
7PQN
DownloadVisualize
BU of 7pqn by Molmil
Catalytic fragment of MASP-2 in complex with ecotin
Descriptor: Ecotin, GLYCEROL, Mannan-binding lectin serine protease 2 A chain, ...
Authors:Harmat, V, Fodor, K, Heja, D.
Deposit date:2021-09-17
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.400015 Å)
Cite:Synergy of protease-binding sites within the ecotin homodimer is crucial for inhibition of MASP enzymes and for blocking lectin pathway activation.
J.Biol.Chem., 298, 2022
3Q60
DownloadVisualize
BU of 3q60 by Molmil
Crystal structure of virulent allele ROP5B pseudokinase domain bound to ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MALONATE ION, ...
Authors:Reese, M.L, Boothroyd, J.C.
Deposit date:2010-12-30
Release date:2011-02-23
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:A conserved non-canonical motif in the pseudoactive site of the ROP5 pseudokinase domain mediates its effect on Toxoplasma virulence.
J.Biol.Chem., 286, 2011
7R79
DownloadVisualize
BU of 7r79 by Molmil
Histoplasma capsulatum H88 Calcium Binding Protein 1 (Cbp1)
Descriptor: Calcium-binding protein
Authors:Herrera, N, Azimova, D, Sil, A, Rosenberg, O.S.
Deposit date:2021-06-24
Release date:2022-04-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cbp1, a fungal virulence factor under positive selection, forms an effector complex that drives macrophage lysis.
Plos Pathog., 18, 2022
7R6U
DownloadVisualize
BU of 7r6u by Molmil
Paracoccidioides americana Pb03 Calcium Binding Protein 1 (Cbp1)
Descriptor: CBP domain-containing protein
Authors:Herrera, N, Azimova, D, Sil, A, Rosenberg, O.S.
Deposit date:2021-06-23
Release date:2022-04-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Cbp1, a fungal virulence factor under positive selection, forms an effector complex that drives macrophage lysis.
Plos Pathog., 18, 2022
5H23
DownloadVisualize
BU of 5h23 by Molmil
Crystal structure of Chikungunya virus capsid protein
Descriptor: 1,2-ETHANEDIOL, Capsid Protein, DI(HYDROXYETHYL)ETHER, ...
Authors:Sharma, R, Kesari, P, Tomar, S, Kumar, P.
Deposit date:2016-10-14
Release date:2018-03-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-function insights into chikungunya virus capsid protein: Small molecules targeting capsid hydrophobic pocket.
Virology, 515, 2018
6K3I
DownloadVisualize
BU of 6k3i by Molmil
Salmonella hook in curved state - 66 subunit models
Descriptor: Flagellar hook protein FlgE
Authors:Shibata, S, Matsunami, H, Wolf, M, Aizawa, S.
Deposit date:2019-05-19
Release date:2019-10-02
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Torque transmission mechanism of the curved bacterial flagellar hook revealed by cryo-EM.
Nat.Struct.Mol.Biol., 26, 2019
6HTE
DownloadVisualize
BU of 6hte by Molmil
Sulfolobus solfataricus Tryptophan Synthase B2a
Descriptor: DI(HYDROXYETHYL)ETHER, PYRIDOXAL-5'-PHOSPHATE, Tryptophan synthase beta chain 2
Authors:Fleming, J, Mayans, O, Bucher, R.
Deposit date:2018-10-04
Release date:2018-11-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.961 Å)
Cite:Evolutionary Morphing of Tryptophan Synthase: Functional Mechanisms for the Enzymatic Channeling of Indole.
J.Mol.Biol., 430, 2018
6JGI
DownloadVisualize
BU of 6jgi by Molmil
Crystal structure of the S65T/F99S/M153T/V163A variant of GFP at 0.85 A
Descriptor: Green fluorescent protein
Authors:Tai, Y, Takaba, K, Hanazono, Y, Miki, K, Takeda, K.
Deposit date:2019-02-14
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Subatomic resolution X-ray structures of green fluorescent protein.
Iucrj, 6, 2019
6JYU
DownloadVisualize
BU of 6jyu by Molmil
Crystal structure of Human G6PD Canton
Descriptor: Glucose-6-phosphate 1-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Au, S.W.N.
Deposit date:2019-04-28
Release date:2020-04-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of Human G6PD Canton
To Be Published
3SRJ
DownloadVisualize
BU of 3srj by Molmil
PfAMA1 in complex with invasion-inhibitory peptide R1
Descriptor: Apical membrane antigen 1, AMA1, R1 peptide
Authors:Vulliez-Le Normand, B, Saul, F.A, Bentley, G.A.
Deposit date:2011-07-07
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and functional insights into the malaria parasite moving junction complex.
Plos Pathog., 8, 2012
6KVM
DownloadVisualize
BU of 6kvm by Molmil
Crystal structure of Chicken MHC Class II for 1.9 angstrom
Descriptor: GLYCEROL, MHC class II alpha chain, MHC class II beta chain 2, ...
Authors:Zhang, L, Xia, C.
Deposit date:2019-09-04
Release date:2019-12-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.897 Å)
Cite:A Newly Recognized Pairing Mechanism of the alpha- and beta-Chains of the Chicken Peptide-MHC Class II Complex.
J Immunol., 204, 2020
3TPI
DownloadVisualize
BU of 3tpi by Molmil
THE GEOMETRY OF THE REACTIVE SITE AND OF THE PEPTIDE GROUPS IN TRYPSIN, TRYPSINOGEN AND ITS COMPLEXES WITH INHIBITORS
Descriptor: BOVINE PANCREATIC TRYPSIN INHIBITOR, CALCIUM ION, ISOLEUCINE, ...
Authors:Huber, R, Bode, W, Deisenhofer, J, Schwager, P.
Deposit date:1982-09-27
Release date:1983-01-18
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Geometry of the Reactive Site and of the Peptide Groups in Trypsin, Trypsinogen and its Complexes with Inhibitors
Acta Crystallogr.,Sect.B, 39, 1983
4US6
DownloadVisualize
BU of 4us6 by Molmil
New Crystal Form of Glucose Isomerase Grown in Short Peptide Supramolecular Hydrogels
Descriptor: CALCIUM ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Gavira, J.A, Conejero-Muriel, M, Diaz-Mochon, J.J, Alvarez de Cienfuegos, L.
Deposit date:2014-07-03
Release date:2015-05-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Influence of the Chirality of Short Peptide Supramolecular Hydrogels in Protein Crystallogenesis.
Chem.Commun.(Camb.), 51, 2015
4V5L
DownloadVisualize
BU of 4v5l by Molmil
The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog
Descriptor: 16S RRNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Voorhees, R.M, Schmeing, T.M, Ramakrishnan, V.
Deposit date:2010-09-02
Release date:2014-07-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The Mechanism for Activation of GTP Hydrolysis on the Ribosome.
Science, 330, 2010
7SJU
DownloadVisualize
BU of 7sju by Molmil
Myocilin OLF mutant T293K
Descriptor: CALCIUM ION, GLYCEROL, Myocilin, ...
Authors:Scelsi, H.S, Barlow, B.M, Lieberman, R.L.
Deposit date:2021-10-19
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.391 Å)
Cite:Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability.
Dis Model Mech, 16, 2023

222624

数据于2024-07-17公开中

PDB statisticsPDBj update infoContact PDBjnumon