Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 64 results

5UH7
DownloadVisualize
BU of 5uh7 by Molmil
Crystal structure of beta'MtbSI of Mycobacterium tuberculosis RNA polymerase
Descriptor: DNA-directed RNA polymerase subunit beta'
Authors:Lin, W, Das, K, Feng, Y, Ebright, R.H.
Deposit date:2017-01-11
Release date:2017-04-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Structural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition.
Mol. Cell, 66, 2017
7KIN
DownloadVisualize
BU of 7kin by Molmil
Mycobacterium tuberculosis WT RNAP transcription open promoter complex with WhiB7 promoter
Descriptor: DNA (49-MER), DNA (54-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Lilic, M, Darst, S.A, Campbell, E.A.
Deposit date:2020-10-23
Release date:2021-04-21
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Structural basis of transcriptional activation by the Mycobacterium tuberculosis intrinsic antibiotic-resistance transcription factor WhiB7.
Mol.Cell, 81, 2021
5ZX3
DownloadVisualize
BU of 5zx3 by Molmil
Mycobacterium tuberculosis RNA polymerase holoenzyme with ECF sigma factor sigma H
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Li, L, Zhang, Y.
Deposit date:2018-05-17
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.751 Å)
Cite:Structural basis for transcription initiation by bacterial ECF sigma factors.
Nat Commun, 10, 2019
5ZX2
DownloadVisualize
BU of 5zx2 by Molmil
Mycobacterium tuberculosis RNA polymerase transcription initiation complex with ECF sigma factor sigma H and 7nt RNA
Descriptor: DNA (47-MER), DNA (48-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Li, L, Zhang, Y.
Deposit date:2018-05-17
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for transcription initiation by bacterial ECF sigma factors.
Nat Commun, 10, 2019
6KOO
DownloadVisualize
BU of 6koo by Molmil
Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 7 nt
Descriptor: DNA (5'-D(*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*TP*G)-3'), DNA (5'-D(*TP*TP*GP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*A)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Li, L, Zhang, Y.
Deposit date:2019-08-12
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription.
Proc.Natl.Acad.Sci.USA, 117, 2020
8E95
DownloadVisualize
BU of 8e95 by Molmil
Mycobacterium tuberculosis RNAP elongation complex
Descriptor: DNA (25-MER), DNA (33-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Delbeau, M, Darst, S.A, Campbell, E.A.
Deposit date:2022-08-26
Release date:2023-03-22
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural and functional basis of the universal transcription factor NusG pro-pausing activity in Mycobacterium tuberculosis.
Mol.Cell, 83, 2023
6JCX
DownloadVisualize
BU of 6jcx by Molmil
Mycobacterium tuberculosis transcription initiation complex with ECF sigma factor sigma H and 6nt RNA
Descriptor: DNA (5'-D(*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*T)-3'), DNA (5'-D(*TP*TP*GP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*A)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Li, L, Zhang, Y.
Deposit date:2019-01-30
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.903 Å)
Cite:Structures and mechanism of transcription initiation by bacterial ECF factors.
Nucleic Acids Res., 47, 2019
8E74
DownloadVisualize
BU of 8e74 by Molmil
Mycobacterium tuberculosis RNAP paused elongation complex with NusG transcription factor
Descriptor: DNA (54-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Delbeau, M, Darst, S.A, Campbell, E.A.
Deposit date:2022-08-23
Release date:2023-03-22
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Structural and functional basis of the universal transcription factor NusG pro-pausing activity in Mycobacterium tuberculosis.
Mol.Cell, 83, 2023
7KIF
DownloadVisualize
BU of 7kif by Molmil
Mycobacterium tuberculosis WT RNAP transcription open promoter complex with WhiB7 transcription factor
Descriptor: DNA (55-MER), DNA (63-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Lilic, M, Darst, S.A, Campbell, E.A.
Deposit date:2020-10-23
Release date:2021-04-21
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Structural basis of transcriptional activation by the Mycobacterium tuberculosis intrinsic antibiotic-resistance transcription factor WhiB7.
Mol.Cell, 81, 2021
6KON
DownloadVisualize
BU of 6kon by Molmil
Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 5 nt
Descriptor: DNA (5'-D(P*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*TP*G)-3'), DNA (5'-D(P*GP*TP*TP*GP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*C)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Li, L, Zhang, Y.
Deposit date:2019-08-12
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription.
Proc.Natl.Acad.Sci.USA, 117, 2020
8EHQ
DownloadVisualize
BU of 8ehq by Molmil
Mycobacterium tuberculosis paused transcription complex with Bacillus subtilis NusG
Descriptor: DNA (38-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Vishwakarma, R.K, Murakami, K.S.
Deposit date:2022-09-14
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Allosteric mechanism of transcription inhibition by NusG-dependent pausing of RNA polymerase.
Proc.Natl.Acad.Sci.USA, 120, 2023
8E82
DownloadVisualize
BU of 8e82 by Molmil
Mycobacterium tuberculosis RNAP elongation complex with NusG transcription factor
Descriptor: DNA (54-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Delbeau, M, Darst, S.A, Campbell, E.A.
Deposit date:2022-08-25
Release date:2023-03-22
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structural and functional basis of the universal transcription factor NusG pro-pausing activity in Mycobacterium tuberculosis.
Mol.Cell, 83, 2023
8EOS
DownloadVisualize
BU of 8eos by Molmil
M. tuberculosis RNAP elongation complex with NusG and CMPCPP
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA (36-MER), DNA (38-MER), ...
Authors:Vishwakarma, R.K, Murakami, K.S.
Deposit date:2022-10-04
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Allosteric mechanism of transcription inhibition by NusG-dependent pausing of RNA polymerase.
Proc.Natl.Acad.Sci.USA, 120, 2023
6JCY
DownloadVisualize
BU of 6jcy by Molmil
Mycobacterium tuberculosis RNA polymerase transcription initiation open complex with a chimeric ECF sigma factor sigH/E
Descriptor: DNA (5'-D(*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*T)-3'), DNA (5'-D(*TP*TP*GP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*A)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Li, L, Zhang, Y.
Deposit date:2019-01-30
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.106 Å)
Cite:Structures and mechanism of transcription initiation by bacterial ECF factors.
Nucleic Acids Res., 47, 2019
8E8M
DownloadVisualize
BU of 8e8m by Molmil
Mycobacterium tuberculosis RNAP paused elongation complex
Descriptor: DNA (54-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Delbeau, M, Darst, S.A, Campbell, E.A.
Deposit date:2022-08-25
Release date:2023-03-22
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural and functional basis of the universal transcription factor NusG pro-pausing activity in Mycobacterium tuberculosis.
Mol.Cell, 83, 2023
8EJ3
DownloadVisualize
BU of 8ej3 by Molmil
M. tuberculosis RNAP pause escaped complex with Bacillus subtilis NusG and GMPCPP
Descriptor: DNA (29-MER), DNA (32-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Vishwakarma, R.K, Murakami, K.S.
Deposit date:2022-09-16
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Allosteric mechanism of transcription inhibition by NusG-dependent pausing of RNA polymerase.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EOE
DownloadVisualize
BU of 8eoe by Molmil
Mycobacterium tuberculosis transcription elongation complex with Bacillus subtilis NusG (EC_LG)
Descriptor: DNA (35-MER), DNA (38-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Vishwakarm, R.K, Murakami, K.S.
Deposit date:2022-10-03
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Allosteric mechanism of transcription inhibition by NusG-dependent pausing of RNA polymerase.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EXY
DownloadVisualize
BU of 8exy by Molmil
M. tuberculosis RNAP paused complex with B. subtilis NusG and GMPCPP
Descriptor: DNA (38-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Vishwakarma, R.K, Murakami, K.S.
Deposit date:2022-10-26
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Allosteric mechanism of transcription inhibition by NusG-dependent pausing of RNA polymerase.
Proc.Natl.Acad.Sci.USA, 120, 2023
6C04
DownloadVisualize
BU of 6c04 by Molmil
Mtb RNAP Holo/RbpA/double fork DNA -closed clamp
Descriptor: DNA (26-MER), DNA (31-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Darst, S.A, Campbell, E.A, Boyaci Selcuk, H, Chen, J, Lilic, M.
Deposit date:2017-12-27
Release date:2018-03-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Fidaxomicin jamsMycobacterium tuberculosisRNA polymerase motions needed for initiation via RbpA contacts.
Elife, 7, 2018
8EOF
DownloadVisualize
BU of 8eof by Molmil
Mycobacterium tuberculosis transcription elongation complex with Bacillus subtilis NusG (EC_PG)
Descriptor: DNA (35-MER), DNA (38-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Vishwakarm, R.K, Murakami, K.S.
Deposit date:2022-10-03
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Allosteric mechanism of transcription inhibition by NusG-dependent pausing of RNA polymerase.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EOT
DownloadVisualize
BU of 8eot by Molmil
M. tuberculosis RNAP elongation complex with NusG
Descriptor: DNA (31-MER), DNA (33-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Vishwakarma, R.K, Murakami, K.S.
Deposit date:2022-10-04
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Allosteric mechanism of transcription inhibition by NusG-dependent pausing of RNA polymerase.
Proc.Natl.Acad.Sci.USA, 120, 2023
6DVC
DownloadVisualize
BU of 6dvc by Molmil
Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L) containing 5nt RNA with 6nt spacer
Descriptor: DNA (5'-D(*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*G)-3'), DNA (5'-D(P*CP*GP*TP*GP*TP*CP*AP*GP*TP*AP*GP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*C)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Lin, W, Das, K, Feng, Y, Ebright, R.H.
Deposit date:2018-06-23
Release date:2019-02-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis of ECF-sigma-factor-dependent transcription initiation.
Nat Commun, 10, 2019
6KOP
DownloadVisualize
BU of 6kop by Molmil
Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 9 nt
Descriptor: DNA (5'-D(*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*TP*G)-3'), DNA (5'-D(*TP*TP*GP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*A)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Li, L, Zhang, Y.
Deposit date:2019-08-12
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.303 Å)
Cite:RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription.
Proc.Natl.Acad.Sci.USA, 117, 2020
6KOQ
DownloadVisualize
BU of 6koq by Molmil
Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 10 nt
Descriptor: DNA (5'-D(*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*TP*G)-3'), DNA (5'-D(*TP*TP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*A)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Li, L, Zhang, Y.
Deposit date:2019-08-12
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.353 Å)
Cite:RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription.
Proc.Natl.Acad.Sci.USA, 117, 2020
6BZO
DownloadVisualize
BU of 6bzo by Molmil
Mtb RNAP Holo/RbpA/Fidaxomicin/upstream fork DNA
Descriptor: DNA (26-MER), DNA (32-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Darst, S.A, Campbell, E.A, Boyaci Selcuk, H, Chen, J.
Deposit date:2017-12-25
Release date:2018-03-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Fidaxomicin jamsMycobacterium tuberculosisRNA polymerase motions needed for initiation via RbpA contacts.
Elife, 7, 2018

 

123>

222036

数据于2024-07-03公开中

PDB statisticsPDBj update infoContact PDBjnumon