Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6Y2J
DownloadVisualize
BU of 6y2j by Molmil
Crystal structure of M. tuberculosis KasA in complex with 4,4,4-trifluoro-N-(isoquinolin-6-yl)butane-1-sulfonamide
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 1, 4,4,4-tris(fluoranyl)-~{N}-isoquinolin-6-yl-butane-1-sulfonamide, SODIUM ION, ...
Authors:Chung, C.
Deposit date:2020-02-16
Release date:2020-04-08
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.886 Å)
Cite:Exploring the SAR of the beta-Ketoacyl-ACP Synthase Inhibitor GSK3011724A and Optimization around a Genotoxic Metabolite.
Acs Infect Dis., 6, 2020
5YKR
DownloadVisualize
BU of 5ykr by Molmil
Crystal structure of a glutamate-1-semialdehyde-aminomutase from Pseudomonas aeruginosa PAO1
Descriptor: Probable aminotransferase
Authors:Li, S, Zhang, Q, Bartlam, M.
Deposit date:2017-10-16
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Crystal structure of a glutamate-1-semialdehyde-aminomutase from Pseudomonas aeruginosa PAO1.
Biochem. Biophys. Res. Commun., 500, 2018
8XJJ
DownloadVisualize
BU of 8xjj by Molmil
Co-crystal structure of SOS-1 and a potent, selective and orally bioavailable SOS1 inhibitor RGT-018
Descriptor: 1,2-ETHANEDIOL, 5-[4-[[(1~{R})-1-[3-[bis(fluoranyl)methyl]-2-fluoranyl-phenyl]ethyl]amino]-2-methyl-6-morpholin-4-yl-7-oxidanylidene-pyrido[4,3-d]pyrimidin-8-yl]pyridine-2-carbonitrile, Son of sevenless homolog 1
Authors:Ren, X.
Deposit date:2023-12-21
Release date:2024-08-14
Last modified:2024-12-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery of RGT-018: A Potent, Selective, and Orally Bioavailable SOS1 Inhibitor for KRAS-Driven Cancers.
Mol.Cancer Ther., 23, 2024
5M9M
DownloadVisualize
BU of 5m9m by Molmil
Human angiogenin PD variant Q77P
Descriptor: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Angiogenin, ...
Authors:Bradshaw, W.J, Rehman, S, Pham, T.T.K, Thiyagarajan, N, Lee, R.L, Subramanian, V, Acharya, K.R.
Deposit date:2016-11-01
Release date:2017-02-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into human angiogenin variants implicated in Parkinson's disease and Amyotrophic Lateral Sclerosis.
Sci Rep, 7, 2017
7ZS6
DownloadVisualize
BU of 7zs6 by Molmil
Crystal structure of Apis mellifera RidA
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Reactive intermediate deaminase A, ...
Authors:Visentin, C, Rizzi, G, Ricagno, S.
Deposit date:2022-05-06
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Apis mellifera RidA, a novel member of the canonical YigF/YER057c/UK114 imine deiminase superfamily of enzymes pre-empting metabolic damage.
Biochem.Biophys.Res.Commun., 616, 2022
1A2W
DownloadVisualize
BU of 1a2w by Molmil
CRYSTAL STRUCTURE OF A 3D DOMAIN-SWAPPED DIMER OF BOVINE PANCREATIC RIBONUCLEASE A
Descriptor: CHLORIDE ION, RIBONUCLEASE A, SULFATE ION
Authors:Liu, Y, Hart, P.J, Schlunegger, M.P, Eisenberg, D.S.
Deposit date:1998-01-12
Release date:1998-04-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of a 3D domain-swapped dimer of RNase A at a 2.1-A resolution.
Proc.Natl.Acad.Sci.USA, 95, 1998
3K85
DownloadVisualize
BU of 3k85 by Molmil
Crystal structure of a D-glycero-D-manno-heptose 1-phosphate kinase from Bacteriodes thetaiotaomicron
Descriptor: D-glycero-D-manno-heptose 1-phosphate kinase
Authors:Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-13
Release date:2009-12-08
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of a D-glycero-D-manno-heptose 1-phosphate kinase from Bacteriodes thetaiotaomicron
To be Published
7MS7
DownloadVisualize
BU of 7ms7 by Molmil
Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with (5-((4-(4-chlorophenyl)piperidin-1-yl)sulfonyl)picolinoyl)glycine
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, N-{5-[4-(4-chlorophenyl)piperidine-1-sulfonyl]pyridine-2-carbonyl}glycine, ...
Authors:Mann, M.K, Zepeda-Velazquez, C.A, Alvarez, H.G, Dong, A, Kiyota, T, Aman, A, Arrowsmith, C.H, Al-Awar, R, Harding, R.J, Schapira, M.
Deposit date:2021-05-10
Release date:2021-06-09
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure-Activity Relationship of USP5 Inhibitors.
J.Med.Chem., 64, 2021
6HDJ
DownloadVisualize
BU of 6hdj by Molmil
R49K variant of beta-phosphoglucomutase from Lactococcus lactis complexed aluminium tetrafluoride and beta-G6P to 1.2 A.
Descriptor: 1,2-ETHANEDIOL, 6-O-phosphono-beta-D-glucopyranose, Beta-phosphoglucomutase, ...
Authors:Robertson, A.J, Bisson, C, Waltho, J.P.
Deposit date:2018-08-17
Release date:2020-08-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Transition state of phospho-enzyme hydrolysis in beta-phosphoglucomutase.
To Be Published
7MS6
DownloadVisualize
BU of 7ms6 by Molmil
Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with (2-fluoro-4-((4-phenylpiperidin-1-yl)sulfonyl)benzoyl)glycine
Descriptor: 1,2-ETHANEDIOL, N-[2-fluoro-4-(4-phenylpiperidine-1-sulfonyl)benzoyl]glycine, SULFATE ION, ...
Authors:Mann, M.K, Zepeda-Velazquez, C.A, Alvarez, H.G, Dong, A, Kiyota, T, Aman, A, Arrowsmith, C.H, Al-Awar, R, Harding, R.J, Schapira, M.
Deposit date:2021-05-10
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure-Activity Relationship of USP5 Inhibitors.
J.Med.Chem., 64, 2021
1A49
DownloadVisualize
BU of 1a49 by Molmil
BIS MG-ATP-K-OXALATE COMPLEX OF PYRUVATE KINASE
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, OXALATE ION, ...
Authors:Larsen, T.M, Benning, M.M, Rayment, I, Reed, G.H.
Deposit date:1998-02-12
Release date:1999-04-20
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the bis(Mg2+)-ATP-oxalate complex of the rabbit muscle pyruvate kinase at 2.1 A resolution: ATP binding over a barrel.
Biochemistry, 37, 1998
8C10
DownloadVisualize
BU of 8c10 by Molmil
Biochemical and structural characterisation of an alkaline family GH5 cellulase from a shipworm symbiont
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GH5 Cellulase, ...
Authors:Leiros, I, Vaaje-Kolstad, G.
Deposit date:2022-12-19
Release date:2023-04-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1 Å)
Cite:Biochemical and structural characterisation of a family GH5 cellulase from endosymbiont of shipworm P. megotara.
Biotechnol Biofuels Bioprod, 16, 2023
7CSN
DownloadVisualize
BU of 7csn by Molmil
Crystal structure of peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.00 A resolution
Descriptor: Peptidyl-tRNA hydrolase
Authors:Viswanathan, V, Sharma, P, Singh, P.K, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2020-08-15
Release date:2020-09-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1 Å)
Cite:Crystal structure of peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.00 A resolution
To Be Published
9DMF
DownloadVisualize
BU of 9dmf by Molmil
Crystal structure of LJF-0085 Fab, a non-human primate antibody targets HIV-1 envelope protein
Descriptor: LJF-0085 Fab heavy chain, LJF-0085 Fab light chain
Authors:Lin, X, Wilson, I.A.
Deposit date:2024-09-13
Release date:2025-07-23
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Vaccination of nonhuman primates elicits a broadly neutralizing antibody lineage targeting a quaternary epitope on the HIV-1 Env trimer.
Immunity, 58, 2025
7CGP
DownloadVisualize
BU of 7cgp by Molmil
Cryo-EM structure of the human mitochondrial translocase TIM22 complex at 3.7 angstrom.
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Acylglycerol kinase, mitochondrial, ...
Authors:Qi, L, Wang, Q, Guan, Z, Yan, C, Yin, P.
Deposit date:2020-07-01
Release date:2020-10-14
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of the human mitochondrial translocase TIM22 complex.
Cell Res., 31, 2021
6HVD
DownloadVisualize
BU of 6hvd by Molmil
Human SLK bound to a maleimide inhibitor
Descriptor: 1,2-ETHANEDIOL, 3-(1,3-benzothiazol-2-ylamino)-4-(2-methoxyphenyl)pyrrole-2,5-dione, STE20-like serine/threonine-protein kinase, ...
Authors:Sorrell, F.J, Berger, B.T, Salah, E, Serafim, R.A.M, Savitsky, P.A, Krojer, T, Bailey, H.J, Pinkas, D, Burgess-Brown, N.A, von Delft, F, Knapp, S, Arrowsmith, C, Bountra, C, Edwards, A.M, Elkins, J.M.
Deposit date:2018-10-10
Release date:2018-10-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Human SLK bound to a maleimide inhibitor
To Be Published
7C5D
DownloadVisualize
BU of 7c5d by Molmil
Crystal structure of TRF2 TRFH domain in complex with a MCPH1 peptide
Descriptor: GLYCEROL, Microcephalin, Telomeric repeat-binding factor 2
Authors:Xiong, X, Chen, Y.
Deposit date:2020-05-19
Release date:2020-10-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Microcephalin 1/BRIT1-TRF2 interaction promotes telomere replication and repair, linking telomere dysfunction to primary microcephaly.
Nat Commun, 11, 2020
8PFK
DownloadVisualize
BU of 8pfk by Molmil
RNA structure with 1-methylpseudouridine, C2 space group
Descriptor: MAGNESIUM ION, RNA (12-mer)
Authors:Spingler, B, McAuley, K, Nievergelt, P, Thorn, A.
Deposit date:2023-06-16
Release date:2024-01-31
Last modified:2025-02-19
Method:X-RAY DIFFRACTION (1.321 Å)
Cite:RNA oligomers at atomic resolution containing 1-methylpseudouridine, an essential building block of mRNA vaccines.
Chemmedchem, 19, 2024
6GS0
DownloadVisualize
BU of 6gs0 by Molmil
Native Glucuronoyl Esterase from Opitutus terrae
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Putative acetyl xylan esterase, ...
Authors:Lo Leggio, L, Larsbrink, J, Meland Knudsen, R, Mazurkewich, S, Navarro Poulsen, J.C.
Deposit date:2018-06-13
Release date:2018-08-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Biochemical and structural features of diverse bacterial glucuronoyl esterases facilitating recalcitrant biomass conversion.
Biotechnol Biofuels, 11, 2018
8PTQ
DownloadVisualize
BU of 8ptq by Molmil
COMPLEX CRYSTAL STRUCTURE OF MUTANT HUMAN MONOGLYCERIDE LIPASE WITH COMPOUND 5l
Descriptor: 1,2-ETHANEDIOL, Monoglyceride lipase, methyl 4-[(2~{S},3~{R})-3-(4-fluorophenyl)-1-(1-methanoylpiperidin-4-yl)-4-oxidanylidene-azetidin-2-yl]benzoate
Authors:Butini, S, Grether, U, Benz, J, Leibrock, L, Maramai, S, Papa, A, Carullo, G, Federico, S, Grillo, A, Di Guglielmo, B, Lamponi, S, Gemma, S, Campiani, G.
Deposit date:2023-07-14
Release date:2024-01-31
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Development of Potent and Selective Monoacylglycerol Lipase Inhibitors. SARs, Structural Analysis, and Biological Characterization.
J.Med.Chem., 67, 2024
5KZA
DownloadVisualize
BU of 5kza by Molmil
Crystal structure of the Rous sarcoma virus matrix protein (aa 2-102). Space group I41
Descriptor: 1,2-ETHANEDIOL, NITRATE ION, virus matrix protein
Authors:Kingston, R.L, Chan, J, Vogt, V.M.
Deposit date:2016-07-24
Release date:2017-07-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Cholesterol Promotes Protein Binding by Affecting Membrane Electrostatics and Solvation Properties.
Biophys. J., 113, 2017
9DGP
DownloadVisualize
BU of 9dgp by Molmil
Motor domain of dynein-1 complex on microtubules
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1, ...
Authors:Rao, Q, Chai, P, Zhang, K.
Deposit date:2024-09-03
Release date:2025-09-10
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of dynein-1 on microtubules
To Be Published
165D
DownloadVisualize
BU of 165d by Molmil
THE STRUCTURE OF A MISPAIRED RNA DOUBLE HELIX AT 1.6 ANGSTROMS RESOLUTION AND IMPLICATIONS FOR THE PREDICTION OF RNA SECONDARY STRUCTURE
Descriptor: DNA/RNA (5'-R(*GP*CP*UP*UP*CP*GP*GP*CP*)-D(*(BRU))-3'), RHODIUM HEXAMINE ION
Authors:Cruse, W, Saludjian, P, Biala, E, Strazewski, P, Prange, T, Kennard, O.
Deposit date:1994-03-21
Release date:1994-08-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of a mispaired RNA double helix at 1.6-A resolution and implications for the prediction of RNA secondary structure.
Proc.Natl.Acad.Sci.USA, 91, 1994
9JTM
DownloadVisualize
BU of 9jtm by Molmil
Human glucose 6 phosphate catalytic subunit 1 (hG6PC1) bound with G6P
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, Glucose-6-phosphatase catalytic subunit 1,GSlinker-HRV3C-GFP-twin strep, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine
Authors:Chen, Q, Zhao, Y.
Deposit date:2024-10-05
Release date:2025-08-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The induced-fit and catalytic mechanisms of human G6PC1
Cell Discov, 11, 2025
9JTL
DownloadVisualize
BU of 9jtl by Molmil
Human glucose 6 phosphate catalytic subunit 1 (hG6PC1) in apo state.
Descriptor: Glucose-6-phosphatase catalytic subunit 1,GS linker-HRV3C-GFP-twin strep, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine
Authors:Chen, Q, Zhao, Y, Wang, Y.
Deposit date:2024-10-05
Release date:2025-08-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The induced-fit and catalytic mechanisms of human G6PC1
Cell Discov, 11, 2025

243083

건을2025-10-15부터공개중

PDB statisticsPDBj update infoContact PDBjnumon