Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5SYB
DownloadVisualize
BU of 5syb by Molmil
Crystal structure of human PHF5A
Descriptor: 1,2-ETHANEDIOL, PHD finger-like domain-containing protein 5A, ZINC ION
Authors:Tsai, J.H.C, Teng, T, Zhu, P, Fekkes, P, Larsen, N.A.
Deposit date:2016-08-10
Release date:2016-09-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Splicing modulators act at the branch point adenosine binding pocket defined by the PHF5A-SF3b complex.
Nat Commun, 8, 2017
1VRA
DownloadVisualize
BU of 1vra by Molmil
Crystal structure of Arginine biosynthesis bifunctional protein argJ (10175521) from Bacillus halodurans at 2.00 A resolution
Descriptor: 1,2-ETHANEDIOL, Arginine biosynthesis bifunctional protein argJ, SULFATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-02-17
Release date:2005-04-12
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Arginine biosynthesis bifunctional protein argJ (10175521) from Bacillus halodurans at 2.00 A resolution
To be published
1VJ4
DownloadVisualize
BU of 1vj4 by Molmil
SEQUENCE-DEPENDENT CONFORMATION OF AN A-DNA DOUBLE HELIX: THE CRYSTAL STRUCTURE OF THE OCTAMER D(G-G-T-A-T-A-C-C)
Descriptor: 5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3'
Authors:Shakked, Z, Rabinovich, D, Kennard, O, Cruse, W.B, Salisbury, S.A, Viswamitra, M.A.
Deposit date:1989-01-11
Release date:1989-01-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Sequence-dependent conformation of an A-DNA double helix: The crystal structure of the octamer d(G-G-T-A-T-A-C-C)
J.Mol.Biol., 166, 1983
1VLB
DownloadVisualize
BU of 1vlb by Molmil
STRUCTURE REFINEMENT OF THE ALDEHYDE OXIDOREDUCTASE FROM DESULFOVIBRIO GIGAS AT 1.28 A
Descriptor: (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), ALDEHYDE OXIDOREDUCTASE, CHLORIDE ION, ...
Authors:Rebelo, J.M, Dias, J.M, Huber, R, Moura, J.J.G, Romao, M.J.
Deposit date:2004-07-20
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Structure refinement of the aldehyde oxidoreductase from Desulfovibrio gigas (MOP) at 1.28 A
J.Biol.Inorg.Chem., 6, 2001
5T16
DownloadVisualize
BU of 5t16 by Molmil
Crystal structure of yeast RNase III (Rnt1p) complexed with a non-hydrolyzable RNA substrate analog
Descriptor: 1,2-ETHANEDIOL, RNA substrate analog, Ribonuclease 3
Authors:Song, H, Ji, X.
Deposit date:2016-08-18
Release date:2017-02-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.783 Å)
Cite:The Functional Cycle of Rnt1p: Five Consecutive Steps of Double-Stranded RNA Processing by a Eukaryotic RNase III.
Structure, 25, 2017
1VGI
DownloadVisualize
BU of 1vgi by Molmil
Crystal structure of xenon bound rat heme-heme oxygenase-1 complex
Descriptor: FORMIC ACID, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Sugishima, M, Sakamoto, H, Noguchi, M, Fukuyama, K.
Deposit date:2004-04-26
Release date:2004-08-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:CO-trapping site in heme oxygenase revealed by photolysis of its co-bound heme complex: mechanism of escaping from product inhibition
J.Mol.Biol., 341, 2004
5SY5
DownloadVisualize
BU of 5sy5 by Molmil
Crystal Structure of the Heterodimeric NPAS1-ARNT Complex
Descriptor: Aryl hydrocarbon receptor nuclear translocator, Neuronal PAS domain-containing protein 1
Authors:Wu, D, Su, X, Potluri, N, Kim, Y, Rastinejad, F.
Deposit date:2016-08-10
Release date:2016-11-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:NPAS1-ARNT and NPAS3-ARNT crystal structures implicate the bHLH-PAS family as multi-ligand binding transcription factors.
Elife, 5, 2016
5VA7
DownloadVisualize
BU of 5va7 by Molmil
Glucocorticoid Receptor DNA Binding Domain - IL11 AP-1 recognition element Complex
Descriptor: DNA (5'-D(*AP*GP*GP*GP*TP*GP*AP*GP*TP*CP*AP*GP*GP*AP*TP*G)-3'), DNA (5'-D(*CP*AP*TP*CP*CP*TP*GP*AP*CP*TP*CP*AP*CP*CP*CP*T)-3'), Glucocorticoid receptor, ...
Authors:Weikum, E.R, Ortlund, E.A.
Deposit date:2017-03-24
Release date:2017-08-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.153 Å)
Cite:Tethering not required: the glucocorticoid receptor binds directly to activator protein-1 recognition motifs to repress inflammatory genes.
Nucleic Acids Res., 45, 2017
1VJ5
DownloadVisualize
BU of 1vj5 by Molmil
Human soluble Epoxide Hydrolase- N-cyclohexyl-N'-(4-iodophenyl)urea complex
Descriptor: HEXAETHYLENE GLYCOL, MAGNESIUM ION, N-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA, ...
Authors:Gomez, G.A, Morisseau, C, Hammock, B.D, Christianson, D.W.
Deposit date:2004-02-03
Release date:2004-04-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of human epoxide hydrolase reveals mechanistic inferences on bifunctional catalysis in epoxide and phosphate ester hydrolysis
Biochemistry, 43, 2004
5VAR
DownloadVisualize
BU of 5var by Molmil
Crystal structure of KDM4A tandem TUDOR domain in complex with a tri-methyl lysine competitive inhibitor
Descriptor: (1R,2S,3R,4S)-3-[(dimethylamino)methyl]-1-phenylbicyclo[2.2.1]heptan-2-ol, Lysine-specific demethylase 4A
Authors:Judge, R.A, Upadhyay, A.K.
Deposit date:2017-03-27
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Targeting lysine specific demethylase 4A (KDM4A) tandem TUDOR domain - A fragment based approach.
Bioorg. Med. Chem. Lett., 28, 2018
1VLP
DownloadVisualize
BU of 1vlp by Molmil
Crystal structure of a putative nicotinate phosphoribosyltransferase (yor209c, npt1) from saccharomyces cerevisiae at 1.75 A resolution
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-08-06
Release date:2004-08-24
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The structure of a eukaryotic nicotinic acid phosphoribosyltransferase reveals structural heterogeneity among type II PRTases.
Structure, 13, 2005
5UJU
DownloadVisualize
BU of 5uju by Molmil
Crystal structure of NAD-dependent aldehyde dehydrogenase from Burkholderia multivorans
Descriptor: 1,2-ETHANEDIOL, IMIDAZOLE, NAD-dependent aldehyde dehydrogenase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-01-19
Release date:2017-04-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of NAD-dependent aldehyde dehydrogenase from Burkholderia multivorans
TO BE PUBLISHED
5UKD
DownloadVisualize
BU of 5ukd by Molmil
PH INFLUENCES FLUORIDE COORDINATION NUMBER OF THE ALFX PHOSPHORYL TRANSFER TRANSITION STATE ANALOG
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, CYTIDINE-5'-MONOPHOSPHATE, ...
Authors:Schlichting, I, Reinstein, J.
Deposit date:1999-04-18
Release date:1999-08-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:pH influences fluoride coordination number of the AlFx phosphoryl transfer transition state analog.
Nat.Struct.Biol., 6, 1999
5V3C
DownloadVisualize
BU of 5v3c by Molmil
Crystal structure of TGT in complex with 4-(aminomethane)cyclohexane-1-carboxylic acid
Descriptor: DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, Queuine tRNA-ribosyltransferase, ...
Authors:Hassaan, E, Heine, A, Klebe, G.
Deposit date:2017-03-07
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.419 Å)
Cite:Fragments as Novel Starting Points for tRNA-Guanine Transglycosylase Inhibitors Found by Alternative Screening Strategies.
Chemmedchem, 15, 2020
5UM2
DownloadVisualize
BU of 5um2 by Molmil
Functional and structural characterization of a Sulfate-binding protein (Sbp) from Xanthomonas citri
Descriptor: ABC transporter sulfate binding protein, GLYCEROL, SULFATE ION
Authors:Pereira, C.T, Hyvonen, M, Balan, A.
Deposit date:2017-01-26
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Sulfate-Binding Protein (Sbp) from Xanthomonas citri: Structure and Functional Insights.
Mol. Plant Microbe Interact., 30, 2017
1UXB
DownloadVisualize
BU of 1uxb by Molmil
ADENOVIRUS AD19p FIBRE HEAD in complex with sialyl-lactose
Descriptor: ACETATE ION, FIBER PROTEIN, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, ...
Authors:Burmeister, W.P, Guilligay, D, Cusack, S, Wadell, G, Arnberg, N.
Deposit date:2004-02-24
Release date:2004-07-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Species D Adenovirus Fiber Knobs and Their Sialic Acid Binding Sites
J.Virol., 78, 2004
5UO1
DownloadVisualize
BU of 5uo1 by Molmil
Structure of human neuronal nitric oxide synthase heme domain in complex with 3-[(2-aminoquinolin-7-yl)methoxy]-5-((methylamino)methyl)benzonitrile
Descriptor: 3-[(2-aminoquinolin-7-yl)methoxy]-5-[(methylamino)methyl]benzonitrile, 5,6,7,8-TETRAHYDROBIOPTERIN, GLYCEROL, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2017-01-31
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Nitrile in the Hole: Discovery of a Small Auxiliary Pocket in Neuronal Nitric Oxide Synthase Leading to the Development of Potent and Selective 2-Aminoquinoline Inhibitors.
J. Med. Chem., 60, 2017
1V8X
DownloadVisualize
BU of 1v8x by Molmil
Crystal Structure of the Dioxygen-bound Heme Oxygenase from Corynebacterium diphtheriae
Descriptor: Heme oxygenase, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Unno, M, Matsui, T, Chu, G.C, Couture, M, Yoshida, T, Rousseau, D.L, Olson, J.S, Ikeda-Saito, M.
Deposit date:2004-01-15
Release date:2004-05-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of the Dioxygen-bound Heme Oxygenase from Corynebacterium diphtheriae: IMPLICATIONS FOR HEME OXYGENASE FUNCTION.
J.Biol.Chem., 279, 2004
1UUV
DownloadVisualize
BU of 1uuv by Molmil
NAPHTHALENE 1,2-DIOXYGENASE WITH NITRIC OXIDE AND INDOLE BOUND IN THE ACTIVE SITE.
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Karlsson, A, Parales, J.V, Parales, R.E, Gibson, D.T, Eklund, H, Ramaswamy, S.
Deposit date:2004-01-11
Release date:2005-02-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:No Binding to Naphthalene Dioxygenase.
J.Biol.Inorg.Chem., 10, 2005
1UW6
DownloadVisualize
BU of 1uw6 by Molmil
X-ray structure of acetylcholine binding protein (AChBP) in complex with nicotine
Descriptor: (S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE, ACETYLCHOLINE-BINDING PROTEIN
Authors:Celie, P.H.N, Van Rossum-fikkert, S.E, Van Dijk, W.J, Brejc, K, Smit, A.B, Sixma, T.K.
Deposit date:2004-01-30
Release date:2004-03-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Nicotine and Carbamylcholine Binding to Nicotinic Acetylcholine Receptors as Studied in Achbp Crystal Structures
Neuron, 41, 2004
5UML
DownloadVisualize
BU of 5uml by Molmil
CRYSTAL STRUCTURE OF HUMAN MDMX IN COMPLEX WITH 12-MER PEPTIDE INHIBITOR M3
Descriptor: PEPTIDE INHIBITOR M3, Protein Mdm4
Authors:Pazgier, M, Gohain, N, Tolbert, W.D.
Deposit date:2017-01-27
Release date:2018-01-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Design of ultrahigh-affinity and dual-specificity peptide antagonists of MDM2 and MDMX for p53 activation
To Be Published
5UOA
DownloadVisualize
BU of 5uoa by Molmil
Structure of human endothelial nitric oxide synthase heme domain in complex with 3-[(2-Amino-4-methylquinolin-7-yl)methoxy]-5-((methylamino)methyl)benzonitrile
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-[(2-amino-4-methylquinolin-7-yl)methoxy]-5-[(methylamino)methyl]benzonitrile, CHLORIDE ION, ...
Authors:Chreifi, G, Li, H, Poulos, T.L.
Deposit date:2017-01-31
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Nitrile in the Hole: Discovery of a Small Auxiliary Pocket in Neuronal Nitric Oxide Synthase Leading to the Development of Potent and Selective 2-Aminoquinoline Inhibitors.
J. Med. Chem., 60, 2017
1V9M
DownloadVisualize
BU of 1v9m by Molmil
Crystal structure of the C subunit of V-type ATPase from Thermus thermophilus
Descriptor: GLYCEROL, V-type ATP synthase subunit C
Authors:Numoto, N, Kita, A, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-26
Release date:2004-05-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the C subunit of V-type ATPase from Thermus thermophilus at 1.85 A resolution.
Acta Crystallogr.,Sect.D, 60, 2004
1UM2
DownloadVisualize
BU of 1um2 by Molmil
Crystal Structure of the Vma1-Derived Endonuclease with the Ligated Extein Segment
Descriptor: 21-mer from Vacuolar ATP synthase catalytic subunit A, ENDONUCLEASE PI-SCEI
Authors:Mizutani, R, Anraku, Y, Satow, Y.
Deposit date:2003-09-22
Release date:2004-09-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Protein splicing of yeast VMA1-derived endonuclease via thiazolidine intermediates.
J.Synchrotron Radiat., 11, 2004
5URS
DownloadVisualize
BU of 5urs by Molmil
Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with IMP and the inhibitor P178
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Kim, Y, Maltseva, N, Makowska-Grzyska, M, Gu, M, Gollapalli, D, Hedstrom, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-02-12
Release date:2017-03-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.388 Å)
Cite:Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with IMP and the inhibitor P178
To Be Published

226262

건을2024-10-16부터공개중

PDB statisticsPDBj update infoContact PDBjnumon