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1I70
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BU of 1i70 by Molmil
CRYSTAL STRUCTURE OF RNASE SA Y86F MUTANT
Descriptor: GUANYL-SPECIFIC RIBONUCLEASE SA, SULFATE ION
Authors:Sevcik, J, Urbanikova, L.
Deposit date:2001-03-07
Release date:2001-09-19
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Tyrosine hydrogen bonds make a large contribution to protein stability.
J.Mol.Biol., 312, 2001
6YUN
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BU of 6yun by Molmil
1.45 Angstrom Resolution Crystal Structure of C-terminal Dimerization Domain of Nucleocapsid Phosphoprotein from SARS-CoV-2
Descriptor: Nucleoprotein
Authors:Zinzula, L, Basquin, J, Nagy, I, Bracher, A.
Deposit date:2020-04-27
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:High-resolution structure and biophysical characterization of the nucleocapsid phosphoprotein dimerization domain from the Covid-19 severe acute respiratory syndrome coronavirus 2.
Biochem.Biophys.Res.Commun., 538, 2021
6ZCO
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BU of 6zco by Molmil
Crystal Structure of C-terminal Dimerization Domain of Nucleocapsid Phosphoprotein from SARS-CoV-2, crystal form II
Descriptor: Nucleoprotein
Authors:Zinzula, L, Basquin, J, Nagy, I, Bracher, A.
Deposit date:2020-06-11
Release date:2020-07-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.361 Å)
Cite:High-resolution structure and biophysical characterization of the nucleocapsid phosphoprotein dimerization domain from the Covid-19 severe acute respiratory syndrome coronavirus 2.
Biochem.Biophys.Res.Commun., 538, 2021
3BIW
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BU of 3biw by Molmil
Crystal structure of the Neuroligin-1/Neurexin-1beta synaptic adhesion complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Arac, D, Boucard, A.A, Ozkan, E, Strop, P, Newell, E, Sudhof, T.C, Brunger, A.T.
Deposit date:2007-12-01
Release date:2007-12-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structures of Neuroligin-1 and the Neuroligin-1/Neurexin-1beta Complex Reveal Specific Protein-Protein and Protein-Ca(2+) Interactions.
Neuron, 56, 2007
1JXB
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BU of 1jxb by Molmil
I53A, a point mutant of the cysteine-free variant of E. coli Rnase HI
Descriptor: Ribonuclease HI
Authors:Spudich, G, Lorenz, S, Marqusee, S.
Deposit date:2001-09-06
Release date:2002-03-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Propagation of a single destabilizing mutation throughout the Escherichia coli ribonuclease HI native state.
Protein Sci., 11, 2002
1LAJ
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BU of 1laj by Molmil
The Structure of Tomato Aspermy Virus by X-Ray Crystallography
Descriptor: 5'-R(*AP*AP*A)-3', MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Lucas, R.W, Larson, S.B, Canady, M.A, McPherson, A.
Deposit date:2002-03-28
Release date:2002-11-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:The Structure of Tomato Aspermy Virus by X-Ray Crystallography
J.STRUCT.BIOL., 139, 2002
3GCA
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BU of 3gca by Molmil
The structural basis for recognition of the preQ0 metabolite by an unusually small riboswitch aptamer domain
Descriptor: 2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBONITRILE, PreQ1 riboswitch, SULFATE ION
Authors:Spitale, R.C, Wedekind, J.E.
Deposit date:2009-02-21
Release date:2009-03-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The Structural Basis for Recognition of the PreQ0 Metabolite by an Unusually Small Riboswitch Aptamer Domain.
J.Biol.Chem., 284, 2009
2XWH
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BU of 2xwh by Molmil
HCV-J6 NS5B polymerase structure at 1.8 Angstrom
Descriptor: DI(HYDROXYETHYL)ETHER, POLYETHYLENE GLYCOL (N=34), RNA DEPENDENT RNA POLYMERASE
Authors:Scrima, N, Bressanelli, S.
Deposit date:2010-11-03
Release date:2011-01-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Comprehensive Structure-Function Comparison of Hepatitis C Virus Strains Jfh1 and J6 Polymerases Reveals a Key Residue Stimulating Replication in Cell Culture Across Genotypes.
J.Virol., 85, 2011
5V37
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Crystal structure of SMYD3 with SAM and EPZ028862
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Boriack-Sjodin, P.A.
Deposit date:2017-03-06
Release date:2018-03-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Small molecule inhibitors and CRISPR/Cas9 mutagenesis demonstrate that SMYD2 and SMYD3 activity are dispensable for autonomous cancer cell proliferation.
Plos One, 13, 2018
2Z41
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BU of 2z41 by Molmil
Crystal Structure Analysis of the Ski2-type RNA helicase
Descriptor: MAGNESIUM ION, putative ski2-type helicase
Authors:Nakashima, T, Zhang, X, Kakuta, Y, Yao, M, Tanaka, I, Kimura, M.
Deposit date:2007-06-12
Release date:2008-04-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:Crystal structure of an archaeal Ski2p-like protein from Pyrococcus horikoshii OT3
Protein Sci., 17, 2008
5VI7
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BU of 5vi7 by Molmil
Crystal structure of the Zika virus NS3 helicase
Descriptor: SULFATE ION, helicase
Authors:Bukrejewska, M, Derewenda, U, Derewenda, Z.S.
Deposit date:2017-04-14
Release date:2017-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Crystal structures of the methyltransferase and helicase from the ZIKA 1947 MR766 Uganda strain.
Acta Crystallogr D Struct Biol, 73, 2017
2GJK
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Structural and functional insights into the human Upf1 helicase core
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Regulator of nonsense transcripts 1
Authors:Cheng, Z, Muhlrad, D, Parker, R, Song, H.
Deposit date:2006-03-31
Release date:2007-01-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional insights into the human Upf1 helicase core
Embo J., 26, 2007
2GK6
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BU of 2gk6 by Molmil
Structural and Functional insights into the human Upf1 helicase core
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Cheng, Z, Muhlrad, D, Parker, R, Song, H.
Deposit date:2006-03-31
Release date:2007-01-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and functional insights into the human Upf1 helicase core
Embo J., 26, 2007
3UCU
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BU of 3ucu by Molmil
The c-di-GMP-I riboswitch bound to pGpG
Descriptor: MAGNESIUM ION, RNA (92-MER), U1 small nuclear ribonucleoprotein A, ...
Authors:Smith, K.D, Strobel, S.A.
Deposit date:2011-10-27
Release date:2012-01-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and biochemical characterization of linear dinucleotide analogues bound to the c-di-GMP-I aptamer.
Biochemistry, 51, 2012
2QJ1
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BU of 2qj1 by Molmil
Crystal structure of infectious bursal disease virus VP1 polymerase incubated with an oligopeptide mimicking the VP3 C-terminus
Descriptor: Infectious bursal disease virus VP1 polymerase
Authors:Garriga, D, Navarro, A, Querol-Audi, J, Abaitua, F, Rodriguez, J.F, Verdaguer, N.
Deposit date:2007-07-06
Release date:2007-11-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Unprecedented activation mechanism of a non-canonical RNA-dependent RNA polymerase
To be Published
3IQR
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BU of 3iqr by Molmil
SAM-I riboswitch from T. tencongensis variant A94G bound with SAM
Descriptor: BARIUM ION, S-ADENOSYLMETHIONINE, SAM-I riboswitch
Authors:Montange, R.K, Batey, R.T.
Deposit date:2009-08-20
Release date:2010-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Free state conformational sampling of the SAM-I riboswitch aptamer domain.
Structure, 18, 2010
7V5Y
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BU of 7v5y by Molmil
Crystal structure of hexameric complex of Sa2YoeB-Sa2YefM toxin-antitoxin from Staphylococcus aureus
Descriptor: Antitoxin, Putative mRNA interferase YoeB
Authors:Xue, L, Khan, M.H, Yue, J.
Deposit date:2021-08-18
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The two paralogous copies of the YoeB-YefM toxin-antitoxin module in Staphylococcus aureus differ in DNA binding and recognition patterns.
J.Biol.Chem., 298, 2022
7V5Z
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BU of 7v5z by Molmil
Crystal structure of heterotetrameric complex of Sa2YoeB-Sa2YefM toxin-antitoxin from Staphylococcus aureus
Descriptor: Antitoxin, Putative mRNA interferase YoeB
Authors:Xue, L, Khan, M.H, Yue, J.
Deposit date:2021-08-18
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The two paralogous copies of the YoeB-YefM toxin-antitoxin module in Staphylococcus aureus differ in DNA binding and recognition patterns.
J.Biol.Chem., 298, 2022
3IQN
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BU of 3iqn by Molmil
Free-state structural transitions of the SAM-I riboswitch
Descriptor: BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:Montange, R.K, Batey, R.T.
Deposit date:2009-08-20
Release date:2010-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Free state conformational sampling of the SAM-I riboswitch aptamer domain.
Structure, 18, 2010
3IQP
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BU of 3iqp by Molmil
SAM-I riboswitch from T. tencongensis variant A94G apo form
Descriptor: BARIUM ION, SAM-I riboswitch
Authors:Montange, R.K, Batey, R.T.
Deposit date:2009-08-20
Release date:2010-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Free state conformational sampling of the SAM-I riboswitch aptamer domain.
Structure, 18, 2010
5XPG
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BU of 5xpg by Molmil
Crystal structure of T. thermophilus Argonaute protein complexed with a bulge 6'U7' on the target strand
Descriptor: 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*A P*GP*T)-3', 5'-R(*UP*AP*U*AP*CP*AP*AP*CP*CP*UP*AP*CP*AP*UP*AP*CP*CP*UP*CP* G)-3', MAGNESIUM ION, ...
Authors:Sheng, G, Gogakos, T, Wang, J, Zhao, H, Serganov, A, Juranek, S, Tuschl, T, Patel, J.D, Wang, Y.
Deposit date:2017-06-02
Release date:2018-04-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure/cleavage-based insights into helical perturbations at bulge sites within T. thermophilus Argonaute silencing complexes.
Nucleic Acids Res., 45, 2017
4HZR
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BU of 4hzr by Molmil
Crystal structure of Ack1 kinase domain
Descriptor: 1,2-ETHANEDIOL, Activated CDC42 kinase 1, CHLORIDE ION, ...
Authors:Gajiwala, K.S.
Deposit date:2012-11-15
Release date:2013-02-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Ack1: activation and regulation by allostery.
Plos One, 8, 2013
4I59
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BU of 4i59 by Molmil
Cyclohexylamine Oxidase from Brevibacterium oxydans IH-35A complexed with cyclohexanone
Descriptor: CYCLOHEXANONE, Cyclohexylamine Oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Mirza, I.A, Berghuis, A.M.
Deposit date:2012-11-28
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Structural Analysis of a Novel Cyclohexylamine Oxidase from Brevibacterium oxydans IH-35A.
Plos One, 8, 2013
2X25
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Free acetyl-CypA orthorhombic form
Descriptor: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A
Authors:Lammers, M, Neumann, H, Chin, J.W, James, L.C.
Deposit date:2010-01-11
Release date:2010-03-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Acetylation Regulates Cyclophilin a Catalysis, Immunosuppression and HIV Isomerization.
Nat.Chem.Biol., 6, 2010
4I58
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BU of 4i58 by Molmil
Cyclohexylamine Oxidase from Brevibacterium oxydans IH-35A
Descriptor: Cyclohexylamine Oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Mirza, I.A, Berghuis, A.M.
Deposit date:2012-11-28
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Analysis of a Novel Cyclohexylamine Oxidase from Brevibacterium oxydans IH-35A.
Plos One, 8, 2013

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