Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5UJV
DownloadVisualize
BU of 5ujv by Molmil
Crystal structure of FePYR1 in complex with abscisic acid
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, PYR1
Authors:Ren, Z, Wang, Z, Zhou, X.E, Hong, Y, Cao, M, Chan, Z, Liu, X, Shi, H, Xu, H.E, Zhu, J.-K.
Deposit date:2017-01-19
Release date:2017-11-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure determination and activity manipulation of the turfgrass ABA receptor FePYR1.
Sci Rep, 7, 2017
6YPD
DownloadVisualize
BU of 6ypd by Molmil
Crystal structure of AmpC from E. coli with Cyclic Boronate 3 (CB3 / APC308)
Descriptor: (3~{S})-2,2-bis(oxidanyl)-3-(phenylmethylsulfanyl)-3,4-dihydro-1,2-benzoxaborinin-2-ium-8-carboxylic acid, 1,2-ETHANEDIOL, Beta-lactamase, ...
Authors:Lang, P.A, Brem, J, Schofield, C.J.
Deposit date:2020-04-15
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Bicyclic Boronates as Potent Inhibitors of AmpC, the Class C beta-Lactamase from Escherichia coli .
Biomolecules, 10, 2020
7KNF
DownloadVisualize
BU of 7knf by Molmil
1.80A resolution structure of independent Phosphoglycerate mutase from C. elegans in complex with a macrocyclic peptide inhibitor (Ce-1 NHOH)
Descriptor: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, DTY-ASP-TYR-PRO-GLY-ASP-HIS-CYS-TYR-LEU-TYR-GLY-THR, SODIUM ION, ...
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Weidmann, M, Dranchak, P, Aitha, M, Queme, B, Collmus, C.D, Kanter, L, Lamy, L, Tao, D, Rai, G, Suga, H, Inglese, J.
Deposit date:2020-11-04
Release date:2021-04-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-activity relationship of ipglycermide binding to phosphoglycerate mutases.
J.Biol.Chem., 296, 2021
7PCU
DownloadVisualize
BU of 7pcu by Molmil
Crystal structure of YTHDF1 YTH domain in complex with ebselen
Descriptor: N-phenyl-2-selanylbenzamide, YTH domain-containing family protein 1
Authors:Dalle Vedove, A, Cazzanelli, G, Quattrone, A, Provenzani, A, Lolli, G.
Deposit date:2021-08-04
Release date:2022-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Small-Molecule Ebselen Binds to YTHDF Proteins Interfering with the Recognition of N 6 -Methyladenosine-Modified RNAs.
Acs Pharmacol Transl Sci, 5, 2022
6YQ3
DownloadVisualize
BU of 6yq3 by Molmil
Promiscuous Reductase LugOII Catalyzes Keto-reduction at C1 during Lugdunomycin Biosynthesis
Descriptor: (3~{R})-8-methoxy-3-methyl-3,6-bis(oxidanyl)-2,4-dihydrobenzo[a]anthracene-1,7,12-trione, 1,2-ETHANEDIOL, Monooxygenase, ...
Authors:Xiao, X, Elsayed, S.S, Wu, C, van der Heul, H, Prota, A, Huang, J, Guo, R, Abrahams, J.P, van Wezel, G.P.
Deposit date:2020-04-16
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Functional and Structural Insights into a Novel Promiscuous Ketoreductase of the Lugdunomycin Biosynthetic Pathway.
Acs Chem.Biol., 15, 2020
8SBW
DownloadVisualize
BU of 8sbw by Molmil
Crystal Structure of 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase from Klebsiella aerogenes (Apo, orthorhombic form)
Descriptor: 2,3-dihydroxybenzoate-2,3-dehydrogenase, ACETATE ION, SULFATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-04-04
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase from Klebsiella aerogenes (Apo, orthorhombic form)
To be published
6CHV
DownloadVisualize
BU of 6chv by Molmil
Proteus vulgaris HigA antitoxin bound to DNA
Descriptor: Antitoxin HigA, MAGNESIUM ION, pHigCryst3, ...
Authors:Schureck, M.A, Hoffer, E.D, Onuoha, N, Dunham, C.M.
Deposit date:2018-02-23
Release date:2019-02-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of transcriptional regulation by the HigA antitoxin.
Mol.Microbiol., 111, 2019
7PV7
DownloadVisualize
BU of 7pv7 by Molmil
Crystal structure of dimeric Porphyromonas gingivalis PorX, a type 9 secretion system response regulator.
Descriptor: BERYLLIUM TRIFLUORIDE ION, FORMIC ACID, GLYCEROL, ...
Authors:Schmitz, C.A, Madej, M, Potempa, J, Sola, M.
Deposit date:2021-10-01
Release date:2022-12-14
Last modified:2022-12-28
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Response regulator PorX coordinates oligonucleotide signalling and gene expression to control the secretion of virulence factors.
Nucleic Acids Res., 50, 2022
6CWX
DownloadVisualize
BU of 6cwx by Molmil
Crystal structure of human ribonuclease P/MRP proteins Rpp20/Rpp25
Descriptor: FORMIC ACID, Ribonuclease P protein subunit p20, Ribonuclease P protein subunit p25, ...
Authors:Chan, C.W, Kiesel, B.R, Mondragon, A.
Deposit date:2018-03-31
Release date:2018-04-18
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Human Rpp20/Rpp25 Reveals Quaternary Level Adaptation of the Alba Scaffold as Structural Basis for Single-stranded RNA Binding.
J. Mol. Biol., 430, 2018
8SAA
DownloadVisualize
BU of 8saa by Molmil
Crystal Structure of Cystathionine beta lyase from Klebsiella aerogenes, PLP and phosphate bound (C2 form)
Descriptor: Cystathionine beta-lyase, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-03-31
Release date:2023-04-12
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure of Cystathionine beta lyase from Klebsiella aerogenes, PLP and phosphate bound (C2 form)
To be published
8SAE
DownloadVisualize
BU of 8sae by Molmil
Crystal Structure of Cystathionine beta lyase from Klebsiella aerogenes, PLP and Hepes bound (C2 form)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Cystathionine beta-lyase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-03-31
Release date:2023-04-12
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Cystathionine beta lyase from Klebsiella aerogenes, PLP and Hepes bound (C2 form)
To be published
5UNT
DownloadVisualize
BU of 5unt by Molmil
Structure of rat neuronal nitric oxide synthase heme domain in complex with 4-Methyl-7-[(3-((methylamino)methyl)phenoxy)methyl]quinolin-2-amine
Descriptor: 4-methyl-7-({3-[(methylamino)methyl]phenoxy}methyl)quinolin-2-amine, 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2017-01-31
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Nitrile in the Hole: Discovery of a Small Auxiliary Pocket in Neuronal Nitric Oxide Synthase Leading to the Development of Potent and Selective 2-Aminoquinoline Inhibitors.
J. Med. Chem., 60, 2017
6YQN
DownloadVisualize
BU of 6yqn by Molmil
Crystal structure of the first bromodomain of human BRD4 in complex with the dual inhibitor TW9
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ~{N}-(2-aminophenyl)-4-[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]t rideca-2(6),4,7,10,12-pentaen-9-yl]ethanoylamino]benzamide
Authors:Joerger, A.C, Balourdas, D.I, Weiser, T, Chatterjee, D, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-04-17
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Characterization of a dual BET/HDAC inhibitor for treatment of pancreatic ductal adenocarcinoma.
Int.J.Cancer, 147, 2020
8SBZ
DownloadVisualize
BU of 8sbz by Molmil
Crystal Structure of 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase from Klebsiella aerogenes (NAD bound, No sulfate hexagonal form)
Descriptor: 2,3-dihydroxybenzoate-2,3-dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-04-04
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase from Klebsiella aerogenes (NAD bound, No sulfate hexagonal form)
To be published
7PK4
DownloadVisualize
BU of 7pk4 by Molmil
Tick salivary cystatin Ricistatin in complex with cathepsin V
Descriptor: 1,2-ETHANEDIOL, Cathepsin L2, DI(HYDROXYETHYL)ETHER, ...
Authors:Busa, M, Mares, M.
Deposit date:2021-08-25
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Protease-bound structure of Ricistatin provides insights into the mechanism of action of tick salivary cystatins in the vertebrate host.
Cell.Mol.Life Sci., 80, 2023
5UO6
DownloadVisualize
BU of 5uo6 by Molmil
Structure of human neuronal nitric oxide synthase heme domain in complex with (R)-3-[(2-amino-4-methylquinolin-7-yl)methoxy]-5-(2-(methylamino)propyl)benzonitrile
Descriptor: 3-[(2-amino-4-methylquinolin-7-yl)methoxy]-5-[(2R)-2-(methylamino)propyl]benzonitrile, 5,6,7,8-TETRAHYDROBIOPTERIN, GLYCEROL, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2017-01-31
Release date:2017-05-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Nitrile in the Hole: Discovery of a Small Auxiliary Pocket in Neuronal Nitric Oxide Synthase Leading to the Development of Potent and Selective 2-Aminoquinoline Inhibitors.
J. Med. Chem., 60, 2017
6YR4
DownloadVisualize
BU of 6yr4 by Molmil
Dye-type peroxidase DtpB in the ferryl state: Spectroscopically Validated composite structure
Descriptor: MAGNESIUM ION, OXYGEN ATOM, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Lucic, M, Dworkowski, F.S.N, Worrall, J.A.R, Hough, M.A.
Deposit date:2020-04-19
Release date:2021-01-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Serial Femtosecond Zero Dose Crystallography Captures a Water-Free Distal Heme Site in a Dye-Decolorising Peroxidase to Reveal a Catalytic Role for an Arginine in Fe IV =O Formation.
Angew.Chem.Int.Ed.Engl., 59, 2020
5ULV
DownloadVisualize
BU of 5ulv by Molmil
Malate dehydrogenase from Methylobacterium extorquens
Descriptor: CALCIUM ION, Malate dehydrogenase
Authors:Gonzalez, J.M.
Deposit date:2017-01-25
Release date:2017-02-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Conformational changes on substrate binding revealed by structures of Methylobacterium extorquens malate dehydrogenase.
Acta Crystallogr F Struct Biol Commun, 74, 2018
7ZJ1
DownloadVisualize
BU of 7zj1 by Molmil
Crystal structure of ADAR1-dsRBD3 dimer
Descriptor: Double-stranded RNA-specific adenosine deaminase
Authors:Mboukou, A, Barraud, P.
Deposit date:2022-04-08
Release date:2023-10-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Dimerization of ADAR1 modulates site-specificity of RNA editing
Biorxiv, 2023
5UM7
DownloadVisualize
BU of 5um7 by Molmil
Crystal structure of the reduced state of the thiol-disulfide reductase SdbA from Streptococcus gordonii
Descriptor: ACETATE ION, Thioredoxin signature protein
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-01-26
Release date:2017-02-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of the reduced state of the thiol-disulfide reductase SdbA from Streptococcus gordonii
To Be Published
8A0Y
DownloadVisualize
BU of 8a0y by Molmil
Crystal structure of mouse contactin 2 immunoglobulin domains
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Contactin-2, ...
Authors:Chataigner, L.M.P, Janssen, B.J.C.
Deposit date:2022-05-30
Release date:2023-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Contactin 2 homophilic adhesion structure and conformational plasticity.
Structure, 32, 2024
7ZRR
DownloadVisualize
BU of 7zrr by Molmil
Crystal structure of human Urokinase-type plasminogen activator in complex with bicycle peptide inhibitor UK965
Descriptor: 1,2-ETHANEDIOL, 1,3,5-tris(bromomethyl)benzene, AMINO GROUP, ...
Authors:Caregnato, A, Angela, P, Mazzoccato, Y, Frasson, N, Angelini, A, Cendron, L.
Deposit date:2022-05-05
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of human Urokinase-type plasminogen activator in complex with bicycle peptide inhibitor UK965
To Be Published
7PWZ
DownloadVisualize
BU of 7pwz by Molmil
Crystal structure of 14-3-3 sigma in complex with a C-terminal Estrogen Receptoralpha phosphopeptide, stabilised by Pyrrolidone1 derivative 228
Descriptor: 14-3-3 protein sigma, 2-oxidanyl-5-[(2~{R})-4-oxidanyl-5-oxidanylidene-2-(1-oxidanylidene-3~{H}-2-benzofuran-5-yl)-3-(phenylcarbonyl)-2~{H}-pyrrol-1-yl]benzoic acid, C-terminus of Estrogen receptor alpha, ...
Authors:Andrei, S.A, Bosica, F, O'Mahony, G, Ottmann, C.
Deposit date:2021-10-07
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Designing Selective Drug-like Molecular Glues for the Glucocorticoid Receptor/14-3-3 Protein-Protein Interaction.
J.Med.Chem., 65, 2022
8SBO
DownloadVisualize
BU of 8sbo by Molmil
Crystal Structure of Dephospho-CoA kinase from Klebsiella aerogenes (P21 Form 2)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Dephospho-CoA kinase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-04-03
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of Dephospho-CoA kinase from Klebsiella aerogenes (P21 Form 2)
To be published
7PWT
DownloadVisualize
BU of 7pwt by Molmil
Crystal structure of 14-3-3 sigma in complex with a C-terminal Estrogen Receptor alpha phosphopeptide, stabilised by pyrrolidone derivative 228
Descriptor: (2~{R})-1-(2-hydroxyphenyl)-2-(4-nitrophenyl)-4-oxidanyl-3-(phenylcarbonyl)-2~{H}-pyrrol-5-one, 14-3-3 protein sigma, C-terminus of Estrogen receptor alpha, ...
Authors:Andrei, S.A, Bosica, F, O'Mahony, G, Ottmann, C.
Deposit date:2021-10-07
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.312 Å)
Cite:Designing Selective Drug-like Molecular Glues for the Glucocorticoid Receptor/14-3-3 Protein-Protein Interaction.
J.Med.Chem., 65, 2022

224201

건을2024-08-28부터공개중

PDB statisticsPDBj update infoContact PDBjnumon