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4DV9
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BU of 4dv9 by Molmil
Crystal structure of BACE1 with its inhibitor
Descriptor: Beta-secretase 1, METHYL (2S)-1-[(2R,5S,8S,12S,13S,16S,19S,22S)-16-(3-AMINO-3-OXOPROPYL)-2,13-DIBENZYL-12,22-DIHYDROXY-3,5,17-TRIMETHYL-8-(2-METHYLPROPYL)-4,7,10,15,18,21-HEXAOXO-19-(PROPAN-2-YL)-3,6,9,14,17,20-HEXAAZATRICOSAN-1-OYL]PYRROLIDINE-2-CARBOXYLATE (NON-PREFERRED NAME), SULFATE ION
Authors:Xu, Y.C, Chen, W.Y, Li, L, Chen, T.T.
Deposit date:2012-02-23
Release date:2013-01-16
Last modified:2021-09-15
Method:X-RAY DIFFRACTION (2.076 Å)
Cite:Cyanobacterial Peptides as a Prototype for the Design of Potent beta-Secretase Inhibitors and the Development of Selective Chemical Probes for Other Aspartic Proteases
J.Med.Chem., 55, 2012
4DVA
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BU of 4dva by Molmil
The crystal structure of human urokinase-type plasminogen activator catalytic domain
Descriptor: HEXAETHYLENE GLYCOL, SULFATE ION, Urokinase-type plasminogen activator
Authors:Jiang, L, Botkjaer, K.A, Andersen, L.M, Yuan, C, Andreasen, P.A, Huang, M.
Deposit date:2012-02-23
Release date:2013-01-16
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Rezymogenation of active urokinase induced by an inhibitory antibody
Biochem.J., 449, 2013
4AQH
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BU of 4aqh by Molmil
Plasminogen activator inhibitor type-1 in complex with the inhibitor AZ3976
Descriptor: PLASMINOGEN ACTIVATOR INHIBITOR 1, TERT-BUTYL 3-[(4-OXO-3H-PYRIDO[2,3-D]PYRIMIDIN-2-YL)AMINO]AZETIDINE-1-CARBOXYLATE
Authors:Fjellstrom, O, Deinum, J, Sjogren, T, Johansson, C, Geschwindner, S, Nerme, V, Legnehed, A, McPheat, J, Olsson, K, Bodin, C, Gustafsson, D.
Deposit date:2012-04-17
Release date:2012-11-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Characterization of a Small Molecule Inhibitor of Plasminogen Activator Inhibitor Type 1 that Accelerates the Transition Into the Latent Conformation
J.Biol.Chem., 288, 2013
3OVO
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BU of 3ovo by Molmil
REFINED X-RAY CRYSTAL STRUCTURES OF THE REACTIVE SITE MODIFIED OVOMUCOID INHIBITOR THIRD DOMAINS FROM SILVER PHEASANT (OMSVP3(ASTERISK)) AND FROM JAPANESE QUAIL (OMJPQ3(ASTERISK))
Descriptor: OVOMUCOID THIRD DOMAIN CLEAVED RDI
Authors:Musil, D, Bode, W.
Deposit date:1991-05-13
Release date:1993-01-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Refined X-ray crystal structures of the reactive site modified ovomucoid inhibitor third domains from silver pheasant (OMSVP3*) and from Japanese quail (OMJPQ3*).
J.Mol.Biol., 220, 1991
4A2Y
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BU of 4a2y by Molmil
STRUCTURE OF THE HUMAN EOSINOPHIL CATIONIC PROTEIN IN COMPLEX WITH CITRATE ANIONS
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CITRIC ACID, EOSINOPHIL CATIONIC PROTEIN
Authors:Boix, E, Pulido, D, Moussaoui, M, Nogues, V, Russi, S.
Deposit date:2011-09-29
Release date:2012-06-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Sulfate-Binding Site Structure of the Human Eosinophil Cationic Protein as Revealed by a New Crystal Form.
J.Struct.Biol., 179, 2012
3P2P
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BU of 3p2p by Molmil
ENHANCED ACTIVITY AND ALTERED SPECIFICITY OF PHOSPHOLIPASE A2 BY DELETION OF A SURFACE LOOP
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Dijkstra, B.W, Thunnissen, M.M.G.M, Kalk, K.H, Drenth, J.
Deposit date:1989-11-29
Release date:1990-01-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Enhanced activity and altered specificity of phospholipase A2 by deletion of a surface loop.
Science, 244, 1989
4DO1
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BU of 4do1 by Molmil
The crystal structures of 4-methoxybenzoate bound CYP199A4
Descriptor: 4-METHOXYBENZOIC ACID, CHLORIDE ION, Cytochrome P450, ...
Authors:Zhou, W, Bell, S.G, Yang, W, Tan, A.B.H, Zhou, R, Johnson, E.O.D, Zhang, A, Rao, Z, Wong, L.-L.
Deposit date:2012-02-09
Release date:2012-08-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structures of 4-methoxybenzoate bound CYP199A2 and CYP199A4: structural changes on substrate binding and the identification of an anion binding site
Dalton Trans, 41, 2012
4DVQ
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BU of 4dvq by Molmil
Structure of human aldosterone synthase, CYP11B2, in complex with deoxycorticosterone
Descriptor: Cytochrome P450 11B2, mitochondrial, DESOXYCORTICOSTERONE, ...
Authors:Strushkevich, N, Shen, L, Tempel, W, Arrowsmith, C, Edwards, A, Usanov, S.A, Park, H.-W.
Deposit date:2012-02-23
Release date:2013-01-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural insights into aldosterone synthase substrate specificity and targeted inhibition.
Mol.Endocrinol., 27, 2013
3DR9
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BU of 3dr9 by Molmil
Increased Distal Histidine Conformational Flexibility in the Deoxy Form of Dehaloperoxidase from Amphitrite ornata
Descriptor: Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Chen, X, de Serrano, V.S, Betts, L, Franzen, S.
Deposit date:2008-07-10
Release date:2009-01-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Distal histidine conformational flexibility in dehaloperoxidase from Amphitrite ornata.
Acta Crystallogr.,Sect.D, 65, 2009
4I9S
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BU of 4i9s by Molmil
Crystal Structure of the R111K:R132L:Y134F:T54V:R59W Mutant of the Cellular Retinoic Acid Binding Protein Type II in Complex with All-Trans Retinal at 2.58 Angstrom Resolution
Descriptor: Cellular retinoic acid-binding protein 2, RETINAL
Authors:Nosrati, M, Geiger, J.H.
Deposit date:2012-12-05
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Rational Design of a Colorimetric pH Sensor from a Soluble Retinoic Acid Chaperone.
J.Am.Chem.Soc., 135, 2013
4A1H
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BU of 4a1h by Molmil
Human myelin P2 protein, K45S mutant
Descriptor: CHLORIDE ION, GLYCEROL, MYELIN P2 PROTEIN, ...
Authors:Lehtimaki, M, Kursula, P.
Deposit date:2011-09-15
Release date:2012-09-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structure-Function Relationships in the Myelin Peripheral Membrane Protein P2
To be Published
4I91
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BU of 4i91 by Molmil
Crystal Structure of Cytochrome P450 2B6 (Y226H/K262R) in complex with alpha-Pinene.
Descriptor: (+)-alpha-Pinene, 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B6, ...
Authors:Shah, M.B, Stout, C.D, Halpert, J.R.
Deposit date:2012-12-04
Release date:2013-07-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Thermodynamic Basis of (+)-alpha-Pinene Binding to Human Cytochrome P450 2B6.
J.Am.Chem.Soc., 135, 2013
3PBD
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BU of 3pbd by Molmil
Endothiapepsin in complex with a fragment
Descriptor: 1H-isoindol-3-amine, Endothiapepsin, GLYCEROL
Authors:Koester, H, Heine, A, Klebe, G.
Deposit date:2010-10-20
Release date:2011-10-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011
4I9R
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BU of 4i9r by Molmil
Crystal Structure of the R111K:R132L:Y134F:T54V:R59W:A32W Mutant of the Cellular Retinoic Acid Binding Protein Type II in Complex with All-Trans Retinal at 2.6 Angstrom Resolution
Descriptor: Cellular retinoic acid-binding protein 2, RETINAL
Authors:Nosrati, M, Geiger, J.H.
Deposit date:2012-12-05
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Rational Design of a Colorimetric pH Sensor from a Soluble Retinoic Acid Chaperone.
J.Am.Chem.Soc., 135, 2013
3PCZ
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BU of 3pcz by Molmil
Endothiapepsin in complex with benzamidine
Descriptor: BENZAMIDINE, DIMETHYL SULFOXIDE, Endothiapepsin
Authors:Koester, H, Heine, A, Klebe, G.
Deposit date:2010-10-22
Release date:2011-10-19
Last modified:2021-08-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Experimental and computational active site mapping as a starting point to fragment-based lead discovery.
Chemmedchem, 7, 2012
4DT3
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BU of 4dt3 by Molmil
Crystal structure of zinc-charged lysozyme
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:An, Y.J, Jeong, C.S, Cha, S.S.
Deposit date:2012-02-20
Release date:2012-09-12
Last modified:2013-07-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Experimental phasing using zinc anomalous scattering
Acta Crystallogr.,Sect.D, 68, 2012
3DV1
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BU of 3dv1 by Molmil
Crystal structure of human beta-secretase in complex with NVP-ARV999
Descriptor: (2R,4S)-N-butyl-4-[(2S,5S,7R)-2,7-dimethyl-3,15-dioxo-1,4-diazacyclopentadecan-5-yl]-4-hydroxy-2-methylbutanamide, Beta-secretase 1
Authors:Rondeau, J.-M.
Deposit date:2008-07-18
Release date:2009-02-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Macrocyclic peptidomimetic beta-secretase (BACE-1) inhibitors with activity in vivo.
Bioorg.Med.Chem.Lett., 19, 2009
4IAT
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BU of 4iat by Molmil
HEW Lysozyme by langmuir- blodgett modified vapour diffusion
Descriptor: Lysozyme C
Authors:Belmonte, L, Pechkova, E, Riekel, C, Scudieri, D, Nicolini, C.
Deposit date:2012-12-07
Release date:2013-12-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Laser - microdissection of protein crystals down to submicron dimensions
To be Published
3PEP
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BU of 3pep by Molmil
REVISED 2.3 ANGSTROMS STRUCTURE OF PORCINE PEPSIN. EVIDENCE FOR A FLEXIBLE SUBDOMAIN
Descriptor: ETHANOL, PEPSIN
Authors:Abad-Zapatero, C, Erickson, J.W.
Deposit date:1989-10-24
Release date:1990-04-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Revised 2.3 A structure of porcine pepsin: evidence for a flexible subdomain
Proteins, 8, 1990
3DXH
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BU of 3dxh by Molmil
Ribonuclease A uridine 5' diphosphate complex
Descriptor: Ribonuclease pancreatic, URIDINE-5'-DIPHOSPHATE
Authors:Tsirkone, V.G, Dossi, K, Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G, Kontou, M.
Deposit date:2008-07-24
Release date:2009-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Inhibitor design to Ribonuclease A: The binding of two 5'phosphate uridine analogues
Acta Crystallogr.,Sect.F, 2009
3DEP
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BU of 3dep by Molmil
Structural basis for specific substrate recognition by the chloroplast signal recognition particle protein cpSRP43
Descriptor: CHLORIDE ION, Signal recognition particle 43 kDa protein, YPGGSFDPLGLA
Authors:Holdermann, I, Stengel, K.F, Wild, K, Sinning, I.
Deposit date:2008-06-10
Release date:2008-08-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for specific substrate recognition by the chloroplast signal recognition particle protein cpSRP43.
Science, 321, 2008
3PEL
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BU of 3pel by Molmil
Structure of Greyhound Hemoglobin: Origin of High Oxygen Affinity
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bhatt, V.S, Zaldivar-Lopez, S, Harris, D.R, Couto, C.G, Wang, P.G, Palmer, A.F.
Deposit date:2010-10-26
Release date:2010-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Greyhound hemoglobin: origin of high oxygen affinity.
Acta Crystallogr.,Sect.D, 67, 2011
3DYB
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BU of 3dyb by Molmil
proteinase K- digalacturonic acid complex
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, Proteinase K, ...
Authors:Larson, S.B, Day, J.S, McPherson, A, Cudney, R, Nguyen, C, Center for High-Throughput Structural Biology (CHTSB)
Deposit date:2008-07-25
Release date:2008-10-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:High-resolution structure of proteinase K cocrystallized with digalacturonic acid.
Acta Crystallogr.,Sect.F, 65, 2009
4IAS
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BU of 4ias by Molmil
HEW Lysozyme by langmuir- blodgett modified vapour diffusion
Descriptor: Lysozyme C
Authors:Belmonte, L, Pechkova, E, Riekel, C, Scudieri, D, Nicolini, C.
Deposit date:2012-12-07
Release date:2013-12-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Laser - microdissection of protein crystals down to submicron dimensions
To be Published
4A7U
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BU of 4a7u by Molmil
Structure of human I113T SOD1 complexed with adrenaline in the p21 space group.
Descriptor: ACETATE ION, COPPER (II) ION, L-EPINEPHRINE, ...
Authors:Wright, G.S.A, Kershaw, N.M, Antonyuk, S.V, Strange, R.W, ONeil, P.M, Hasnain, S.S.
Deposit date:2011-11-14
Release date:2012-11-28
Last modified:2013-05-08
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Ligand Binding and Aggregation of Pathogenic Sod1.
Nat.Commun., 4, 2013

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