Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7LUM
DownloadVisualize
BU of 7lum by Molmil
Human TRiC in ATP/AlFx closed state
Descriptor: T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, T-complex protein 1 subunit delta, ...
Authors:Knowlton, J.J, Gestaut, D, Ma, B, Taylor, G, Seven, A.B, Leitner, A, Wilson, G.J, Shanker, S, Yates, N.A, Prasad, B.V.V, Aebersold, R, Chiu, W, Frydman, J, Dermody, T.S.
Deposit date:2021-02-22
Release date:2021-03-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural and functional dissection of reovirus capsid folding and assembly by the prefoldin-TRiC/CCT chaperone network.
Proc.Natl.Acad.Sci.USA, 118, 2021
6OM3
DownloadVisualize
BU of 6om3 by Molmil
Crystal structure of the Orc1 BAH domain in complex with a nucleosome core particle
Descriptor: DNA (146-MER), DNA (147-MER), Histone H2A, ...
Authors:De Ioannes, P.E, Wang, M, Armache, K.-J.
Deposit date:2019-04-18
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure and function of the Orc1 BAH-nucleosome complex.
Nat Commun, 10, 2019
1H0H
DownloadVisualize
BU of 1h0h by Molmil
Tungsten containing Formate Dehydrogenase from Desulfovibrio Gigas
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Raaijmakers, H.C.A.
Deposit date:2002-06-19
Release date:2003-02-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Gene Sequence and the 1.8 A Crystal Structure of the Tungsten-Containing Formate Dehydrogenase from Desulfovibrio Gigas
Structure, 10, 2002
3RC1
DownloadVisualize
BU of 3rc1 by Molmil
Crystal Structure of KijD10, a 3-ketoreductase from Actinomadura kijaniata incomplex with NADP and TDP-benzene
Descriptor: 1,2-ETHANEDIOL, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phenoxy)phosphoryl]oxy}phosphoryl]thymidine, CHLORIDE ION, ...
Authors:Holden, H.M, Kubiak, R.L.
Deposit date:2011-03-30
Release date:2011-06-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Combined Structural and Functional Investigation of a C-3''-Ketoreductase Involved in the Biosynthesis of dTDP-l-Digitoxose.
Biochemistry, 50, 2011
6TCA
DownloadVisualize
BU of 6tca by Molmil
Phosphorylated p38 and MAPKAPK2 complex with inhibitor
Descriptor: MAP kinase-activated protein kinase 2, Mitogen-activated protein kinase 14, N-[5-(dimethylsulfamoyl)-2-methylphenyl]-1-phenyl-5-propyl-1H-pyrazole-4-carboxamide
Authors:Sok, P, Remenyi, A.
Deposit date:2019-11-05
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:MAP Kinase-Mediated Activation of RSK1 and MK2 Substrate Kinases.
Structure, 28, 2020
1MLB
DownloadVisualize
BU of 1mlb by Molmil
MONOCLONAL ANTIBODY FAB D44.1 RAISED AGAINST CHICKEN EGG-WHITE LYSOZYME
Descriptor: IGG1-KAPPA D44.1 FAB (HEAVY CHAIN), IGG1-KAPPA D44.1 FAB (LIGHT CHAIN)
Authors:Braden, B.C, Souchon, H, Eisele, J.-L, Bentley, G.A, Bhat, T.N, Navaza, J, Poljak, R.J.
Deposit date:1995-03-08
Release date:1995-06-03
Last modified:2013-09-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three-dimensional structures of the free and the antigen-complexed Fab from monoclonal anti-lysozyme antibody D44.1.
J.Mol.Biol., 243, 1994
8QKT
DownloadVisualize
BU of 8qkt by Molmil
Structure of a nucleosome composed of a palindromic 167-base pair blunt-ended DNA fragment
Descriptor: DNA (167-MER), Histone H2A, Histone H2B type 1-J, ...
Authors:Ma, Z, Davey, C.A.
Deposit date:2023-09-17
Release date:2023-10-18
Method:X-RAY DIFFRACTION (3.261 Å)
Cite:Structure of a nucleosome composed of a palindromic 167-base pair blunt-ended DNA fragment
To Be Published
8QFS
DownloadVisualize
BU of 8qfs by Molmil
Cryo-EM structure of SidH from Legionella pneumophila
Descriptor: Elongation factor Tu, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Sharma, R, Weis, F, Bhogaraju, S.
Deposit date:2023-09-04
Release date:2023-10-11
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis for the toxicity of Legionella pneumophila effector SidH.
Nat Commun, 14, 2023
8QHE
DownloadVisualize
BU of 8qhe by Molmil
Crystal structure IR-09
Descriptor: 6-phosphogluconate dehydrogenase NADP-binding domain-containing protein, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Levy, C.W.
Deposit date:2023-09-07
Release date:2023-10-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Biocatalysis in Drug Design: Engineered Reductive Aminases (RedAms) Are Used to Access Chiral Building Blocks with Multiple Stereocenters.
J.Am.Chem.Soc., 145, 2023
8QED
DownloadVisualize
BU of 8qed by Molmil
S. cerevisia Niemann-Pick type C protein NCR1 in LMNG at pH 5.5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ERGOSTEROL, NPC intracellular sterol transporter 1-related protein 1, ...
Authors:Frain, K.M, Nel, L, Dedic, E, Olesen, E, Stokes, D, Panyella Pedersen, B.
Deposit date:2023-08-31
Release date:2023-10-18
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Conformational changes in the Niemann-Pick type C1 protein NCR1 drive sterol translocation.
Proc.Natl.Acad.Sci.USA, 121, 2024
5O3V
DownloadVisualize
BU of 5o3v by Molmil
Structural characterization of the fast and promiscuous macrocyclase from plant - PCY1-S562A bound to Presegetalin B1
Descriptor: MAGNESIUM ION, Peptide cyclase 1, Putative presegetalin B1, ...
Authors:Ludewig, H, Czekster, C.M, Bent, A.F, Naismith, J.H.
Deposit date:2017-05-25
Release date:2018-02-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Characterization of the Fast and Promiscuous Macrocyclase from Plant PCY1 Enables the Use of Simple Substrates.
ACS Chem. Biol., 13, 2018
8QLQ
DownloadVisualize
BU of 8qlq by Molmil
Human MST3 (STK24) kinase in complex with macrocyclic inhibitor JA310
Descriptor: 1,2-ETHANEDIOL, Serine/threonine-protein kinase 24, macrocyclic inhibitor
Authors:Balourdas, D.I, Amrhein, J.A, Hanke, T, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2023-09-20
Release date:2023-11-08
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Synthesis of Pyrazole-Based Macrocycles Leads to a Highly Selective Inhibitor for MST3.
J.Med.Chem., 67, 2024
8DPY
DownloadVisualize
BU of 8dpy by Molmil
Synthetic Beta Sheet Macrocycle Stabilized by Hydrogen Bond Surrogates
Descriptor: beta sheet-forming peptide with flexible linker
Authors:Lu, B, Vecchioni, S, Nazzaro, A, Arora, P.S.
Deposit date:2022-07-18
Release date:2023-05-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1 Å)
Cite:Macrocyclic beta-Sheets Stabilized by Hydrogen Bond Surrogates.
Angew.Chem.Int.Ed.Engl., 62, 2023
8B0R
DownloadVisualize
BU of 8b0r by Molmil
Structure of the CalpL/cA4 complex
Descriptor: Cyclic tetraadenosine monophosphate (cA4), SMODS-associated and fused to various effectors domain-containing protein, SULFATE ION, ...
Authors:Schneberger, N, Hagelueken, G.
Deposit date:2022-09-08
Release date:2022-11-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Antiviral signalling by a cyclic nucleotide activated CRISPR protease.
Nature, 614, 2023
8AMG
DownloadVisualize
BU of 8amg by Molmil
Crystal structure of AUGUGGCAU duplex with barium ions (model 1)
Descriptor: BARIUM ION, RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')
Authors:Kiliszek, A, Rypniewski, W.
Deposit date:2022-08-03
Release date:2022-11-23
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair.
Rna, 29, 2022
8AMM
DownloadVisualize
BU of 8amm by Molmil
Crystal structure of AUGUGGCAU duplex with cesium ions
Descriptor: CESIUM ION, RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')
Authors:Kiliszek, A, Rypniewski, W.
Deposit date:2022-08-03
Release date:2022-11-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair.
Rna, 29, 2022
8Y0U
DownloadVisualize
BU of 8y0u by Molmil
dormant ribosome with STM1
Descriptor: 18S rRNA, 25S rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, M, Zeng, F.
Deposit date:2024-01-23
Release date:2024-02-07
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:dormant ribosome with STM1
To Be Published
5O3U
DownloadVisualize
BU of 5o3u by Molmil
Structural characterization of the fast and promiscuous macrocyclase from plant - PCY1-S562A bound to Presegetalin F1
Descriptor: Peptide cyclase 1, Putative presegetalin F1
Authors:Ludewig, H, Czekster, C.M, Bent, A.F, Naismith, J.H.
Deposit date:2017-05-25
Release date:2018-02-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Characterization of the Fast and Promiscuous Macrocyclase from Plant PCY1 Enables the Use of Simple Substrates.
ACS Chem. Biol., 13, 2018
8AMJ
DownloadVisualize
BU of 8amj by Molmil
Crystal structure of unliganded AUGUGGCAU duplex
Descriptor: ACETATE ION, RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3'), SULFATE ION
Authors:Kiliszek, A, Rypniewski, W.
Deposit date:2022-08-03
Release date:2022-11-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair.
Rna, 29, 2022
8AMK
DownloadVisualize
BU of 8amk by Molmil
Crystal structure of AUGUGGCAU duplex crystallized in the presence of calcium ions
Descriptor: RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')
Authors:Kiliszek, A, Rypniewski, W.
Deposit date:2022-08-03
Release date:2022-11-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair.
Rna, 29, 2022
8AMI
DownloadVisualize
BU of 8ami by Molmil
Crystal structure of AUGUGGCAU duplex with barium ions (model 2)
Descriptor: BARIUM ION, RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3'), SODIUM ION
Authors:Kiliszek, A, Rypniewski, W.
Deposit date:2022-08-03
Release date:2022-11-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair.
Rna, 29, 2022
8AMN
DownloadVisualize
BU of 8amn by Molmil
Crystal structure of AUGUGGCAU duplex with strontium ions
Descriptor: RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3'), STRONTIUM ION
Authors:Kiliszek, A, Rypniewski, W.
Deposit date:2022-08-03
Release date:2022-11-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair.
Rna, 29, 2022
8AML
DownloadVisualize
BU of 8aml by Molmil
Crystal structure of AUGUGGCAU duplex with cadmium ions
Descriptor: CADMIUM ION, RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')
Authors:Kiliszek, A, Rypniewski, W.
Deposit date:2022-08-03
Release date:2022-11-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair.
Rna, 29, 2022
8EDG
DownloadVisualize
BU of 8edg by Molmil
Cryo-EM structure of the Hermes transposase bound to two left-ends of its DNA transposon
Descriptor: DNA (46-MER), DNA (5'-D(*GP*CP*GP*TP*GP*AP*A)-3'), DNA (55-MER), ...
Authors:Lannes, L, Dyda, F.
Deposit date:2022-09-04
Release date:2023-08-02
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.64 Å)
Cite:Zinc-finger BED domains drive the formation of the active Hermes transpososome by asymmetric DNA binding.
Nat Commun, 14, 2023
8SYI
DownloadVisualize
BU of 8syi by Molmil
Cyanobacterial RNAP-EC
Descriptor: DNA (37-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Qayyum, M.Z, Imashimizu, M, Leanca, M, Vishwakarma, R.K, Bradley Riaz, A, Yuzenkova, Y, Murakami, K.S.
Deposit date:2023-05-25
Release date:2023-07-05
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Structure and function of the Si3 insertion integrated into the trigger loop/helix of cyanobacterial RNA polymerase.
Proc.Natl.Acad.Sci.USA, 121, 2024

223790

건을2024-08-14부터공개중

PDB statisticsPDBj update infoContact PDBjnumon