Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7S70
DownloadVisualize
BU of 7s70 by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI34
Descriptor: (1R,2S,5S)-N-{(2S,3R)-4-(butylamino)-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
Authors:Yang, K.S, Sankaran, B, Liu, W.R.
Deposit date:2021-09-15
Release date:2022-07-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A systematic exploration of boceprevir-based main protease inhibitors as SARS-CoV-2 antivirals.
Eur.J.Med.Chem., 240, 2022
7S8H
DownloadVisualize
BU of 7s8h by Molmil
Structure of Lassa virus glycoprotein bound to Fab 18.5C and Fab 36.1F
Descriptor: 18.5C Fab Heavy Chain, 18.5C Fab Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hastie, K.M, Enriquez, A.S.
Deposit date:2021-09-17
Release date:2022-06-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Delineating the mechanism of anti-Lassa virus GPC-A neutralizing antibodies.
Cell Rep, 39, 2022
8TN8
DownloadVisualize
BU of 8tn8 by Molmil
Crystal structure of the murine astrovirus capsid spike at 1.75 A
Descriptor: Capsid polyprotein VP90, POTASSIUM ION
Authors:Lanning, S, DuBois, R.M.
Deposit date:2023-08-01
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure and immunogenicity of the murine astrovirus capsid spike.
J.Gen.Virol., 104, 2023
6DM8
DownloadVisualize
BU of 6dm8 by Molmil
Understanding the Species Selectivity of Myeloid cell leukemia-1 (Mcl-1) inhibitors
Descriptor: 4-{8-chloro-11-[3-(4-chloro-3,5-dimethylphenoxy)propyl]-1-oxo-7-(1,3,5-trimethyl-1H-pyrazol-4-yl)-4,5-dihydro-1H-[1,4]diazepino[1,2-a]indol-2(3H)-yl}-1-methyl-1H-indole-6-carboxylic acid, Induced myeloid leukemia cell differentiation protein Mcl-1 homolog - MBP chimera, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Zhao, B.
Deposit date:2018-06-04
Release date:2018-08-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Understanding the Species Selectivity of Myeloid Cell Leukemia-1 (Mcl-1) Inhibitors.
Biochemistry, 57, 2018
5TMC
DownloadVisualize
BU of 5tmc by Molmil
Re-refinement of Thermus thermopiles DNA-directed RNA polymerase structure
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Wang, J.
Deposit date:2016-10-12
Release date:2016-11-23
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:On the validation of crystallographic symmetry and the quality of structures.
Protein Sci., 24, 2015
8CC7
DownloadVisualize
BU of 8cc7 by Molmil
Mouse serotonin 5-HT3A receptor in complex with PZ-1939
Descriptor: 1-(3-chlorophenyl)sulfonyl-4-piperazin-1-yl-pyrrolo[3,2-c]quinoline, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lopez-Sanchez, U, Nury, H.
Deposit date:2023-01-26
Release date:2023-10-11
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Superiority of the Triple-Acting 5-HT 6 R/5-HT 3 R Antagonist and MAO-B Reversible Inhibitor PZ-1922 over 5-HT 6 R Antagonist Intepirdine in Alleviation of Cognitive Deficits in Rats.
J.Med.Chem., 66, 2023
8CC6
DownloadVisualize
BU of 8cc6 by Molmil
Mouse serotonin 5-HT3A receptor in complex with PZ-1922
Descriptor: 1-[(3-chlorophenyl)methyl]-4-piperazin-1-yl-pyrrolo[3,2-c]quinoline, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lopez-Sanchez, U, Nury, H.
Deposit date:2023-01-26
Release date:2023-10-11
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Superiority of the Triple-Acting 5-HT 6 R/5-HT 3 R Antagonist and MAO-B Reversible Inhibitor PZ-1922 over 5-HT 6 R Antagonist Intepirdine in Alleviation of Cognitive Deficits in Rats.
J.Med.Chem., 66, 2023
1BG9
DownloadVisualize
BU of 1bg9 by Molmil
BARLEY ALPHA-AMYLASE WITH SUBSTRATE ANALOGUE ACARBOSE
Descriptor: 1,4-ALPHA-D-GLUCAN GLUCANOHYDROLASE, 4,6-dideoxy-4-{[(1S,4S,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-beta-D-glucopyranose, 4,6-dideoxy-4-{[(1S,5R,6S)-3-formyl-5,6-dihydroxy-4-oxocyclohex-2-en-1-yl]amino}-alpha-D-xylo-hex-5-enopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Kadziola, A, Haser, R.
Deposit date:1998-06-05
Release date:1999-06-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular structure of a barley alpha-amylase-inhibitor complex: implications for starch binding and catalysis.
J.Mol.Biol., 278, 1998
2UUJ
DownloadVisualize
BU of 2uuj by Molmil
Thrombin-hirugen-gw473178 ternary complex at 1.32A resolution
Descriptor: CALCIUM ION, HIRUDIN I, HUMAN ALPHA THROMBIN, ...
Authors:Ahmed, H.U, Blakeley, M.P, Cianci, M, Cruickshank, D.W.J, Hubbard, J.A, Helliwell, J.R.
Deposit date:2007-03-03
Release date:2007-09-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:The Determination of Protonation States in Proteins.
Acta Crystallogr.,Sect.D, 63, 2007
2UUK
DownloadVisualize
BU of 2uuk by Molmil
Thrombin-hirugen-gw420128 ternary complex at 1.39A resolution
Descriptor: CALCIUM ION, HIRUDIN I, HUMAN ALPHA THROMBIN, ...
Authors:Ahmed, H.U, Blakeley, M.P, Cianci, M, Cruickshank, D.W.J, Hubbard, J.A, Helliwell, J.R.
Deposit date:2007-03-03
Release date:2007-09-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:The Determination of Protonation States in Proteins.
Acta Crystallogr.,Sect.D, 63, 2007
2YZ4
DownloadVisualize
BU of 2yz4 by Molmil
The neutron structure of concanavalin A at 2.2 Angstroms
Descriptor: CALCIUM ION, Concanavalin A, MANGANESE (II) ION
Authors:Ahmed, H.U, Blakeley, M.P, Cianci, M, Hubbard, J.A, Helliwell, J.R.
Deposit date:2007-05-02
Release date:2008-02-05
Last modified:2023-10-25
Method:NEUTRON DIFFRACTION (2.2 Å)
Cite:The determination of protonation states in proteins.
Acta Crystallogr.,Sect.D, 63, 2007
6W03
DownloadVisualize
BU of 6w03 by Molmil
Crystal Structure of HIV-1 BG505 DS-SOSIP.3mut Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.3 Angstrom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 scFv heavy chain, ...
Authors:Lai, Y.-T, Kwong, P.D.
Deposit date:2020-02-28
Release date:2020-04-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Development of a 3Mut-Apex-Stabilized Envelope Trimer That Expands HIV-1 Neutralization Breadth When Used To Boost Fusion Peptide-Directed Vaccine-Elicited Responses.
J.Virol., 94, 2020
6VZI
DownloadVisualize
BU of 6vzi by Molmil
Crystal Structure of HIV-1 CAP256 RnS-3mut-2G-SOSIP.664 Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.5 Angstrom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 scFv heavy chain, ...
Authors:Lai, Y.-T, Kwong, P.D.
Deposit date:2020-02-28
Release date:2020-04-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.716 Å)
Cite:Development of a 3Mut-Apex-Stabilized Envelope Trimer That Expands HIV-1 Neutralization Breadth When Used To Boost Fusion Peptide-Directed Vaccine-Elicited Responses.
J.Virol., 94, 2020
7ZMJ
DownloadVisualize
BU of 7zmj by Molmil
SFX structure of dye-type peroxidase DtpB R243A variant in the ferric state
Descriptor: MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Putative dye-decolorizing peroxidase (DyP), ...
Authors:Lucic, M, Worrall, J.A.R, Hough, M.A, Shilova, A, Axford, D.A, Owen, R.L, Tosha, T, Sugimoto, H, Owada, S.
Deposit date:2022-04-19
Release date:2022-12-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB.
Acs Catalysis, 12, 2022
4XY2
DownloadVisualize
BU of 4xy2 by Molmil
Crystal structure of PDE10A in complex with ASP9436
Descriptor: 1-methyl-5-(1-methyl-3-{[4-(1-methyl-1H-benzimidazol-4-yl)phenoxy]methyl}-1H-pyrazol-4-yl)pyridin-2(1H)-one, MAGNESIUM ION, ZINC ION, ...
Authors:Amano, Y, Honbou, K.
Deposit date:2015-02-02
Release date:2015-06-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Addressing phototoxicity observed in a novel series of biaryl derivatives: Discovery of potent, selective and orally active phosphodiesterase 10A inhibitor ASP9436
Bioorg.Med.Chem., 23, 2015
1N0X
DownloadVisualize
BU of 1n0x by Molmil
Crystal Structure of a Broadly Neutralizing Anti-HIV-1 Antibody in Complex with a Peptide Mimotope
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, B2.1 peptide, GLYCEROL, ...
Authors:Saphire, E.O, Montero, M, Menendez, A, Irving, M.B, Zwick, M.B, Parren, P.W.H.I, Burton, D.R, Scott, J.K, Wilson, I.A.
Deposit date:2002-10-15
Release date:2004-04-13
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of a Broadly Neutralizing Anti-HIV-1 Antibody in Complex with a Peptide Mimotope
To be Published
8PQ4
DownloadVisualize
BU of 8pq4 by Molmil
Structure of HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69)
Descriptor: 1,2-ETHANEDIOL, Transcriptional regulator HosA
Authors:Arpita, G, Kavyashree, M, Kannika, B.R, Madan Kumar, S.
Deposit date:2023-07-10
Release date:2023-07-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69)
To Be Published
7QZH
DownloadVisualize
BU of 7qzh by Molmil
SFX structure of dye-type peroxidase DtpB D152A variant in the ferric state
Descriptor: Dyp-type peroxidase family, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lucic, M, Worrall, J.A.R, Hough, M.A, Shilova, A, Axford, D.A, Owen, R.L, Tosha, T, Sugimoto, H, Owada, S.
Deposit date:2022-01-31
Release date:2022-12-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB.
Acs Catalysis, 12, 2022
7QZE
DownloadVisualize
BU of 7qze by Molmil
SFX structure of dye-type peroxidase DtpB D152A variant in the ferryl state
Descriptor: Dyp-type peroxidase family, MAGNESIUM ION, OXYGEN ATOM, ...
Authors:Lucic, M, Worrall, J.A.R, Hough, M.A, Shilova, A, Axford, D.A, Owen, R.L, Tosha, T, Sugimoto, H, Owada, S.
Deposit date:2022-01-31
Release date:2022-12-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB.
Acs Catalysis, 12, 2022
7QZG
DownloadVisualize
BU of 7qzg by Molmil
SFX structure of dye-type peroxidase DtpB N245A variant in the ferric state
Descriptor: Dyp-type peroxidase family, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lucic, M, Worrall, J.A.R, Hough, M.A, Shilova, A, Axford, D.A, Owen, R.L, Tosha, T, Sugimoto, H, Owada, S.
Deposit date:2022-01-31
Release date:2022-12-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB.
Acs Catalysis, 12, 2022
7QZF
DownloadVisualize
BU of 7qzf by Molmil
SFX structure of dye-type peroxidase DtpB D152A/N245A variant in the ferric state
Descriptor: Dyp-type peroxidase family, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lucic, M, Worrall, J.A.R, Hough, M.A, Shilova, A, Owen, R.L, Axford, D, Tosha, T, Sugimoto, H, Owada, S.
Deposit date:2022-01-31
Release date:2022-12-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB.
Acs Catalysis, 12, 2022
4ZV6
DownloadVisualize
BU of 4zv6 by Molmil
Crystal structure of the artificial alpharep-7 octarellinV.1 complex
Descriptor: AlphaRep-7, Octarellin V.1
Authors:Figueroa, M, Sleutel, M, Urvoas, A, Valerio-Lepiniec, M, Minard, P, Martial, J.A, van de Weerdt, C.
Deposit date:2015-05-18
Release date:2016-05-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:The unexpected structure of the designed protein Octarellin V.1 forms a challenge for protein structure prediction tools.
J.Struct.Biol., 195, 2016
3MBZ
DownloadVisualize
BU of 3mbz by Molmil
OXA-24 beta-lactamase complex soaked with 10mM SA4-17 inhibitor for 15min
Descriptor: (2S,3R)-2-[(7-aminocarbonyl-2-methanoyl-indolizin-3-yl)amino]-4-aminocarbonyloxy-3-methyl-3-sulfino-butanoic acid, Betalactamase OXA24, SULFATE ION
Authors:Sampson, J, van den Akker, F.
Deposit date:2010-03-26
Release date:2011-03-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Design, synthesis, and crystal structures of 6-alkylidene-2'-substituted penicillanic acid sulfones as potent inhibitors of Acinetobacter baumannii OXA-24 carbapenemase
J.Am.Chem.Soc., 132, 2010
3MOY
DownloadVisualize
BU of 3moy by Molmil
Crystal structure of probable enoyl-CoA hydratase from Mycobacterium smegmatis
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2010-04-23
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
4KAM
DownloadVisualize
BU of 4kam by Molmil
X-ray crystal structure of O-acetylhomoserine sulfhydrylase MetC from Mycobacterium marinum ATCC BAA-535 / M
Descriptor: O-acetylhomoserine sulfhydrylase MetC, SULFATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2013-04-22
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015

226262

건을2024-10-16부터공개중

PDB statisticsPDBj update infoContact PDBjnumon