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7D4I
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BU of 7d4i by Molmil
Cryo-EM structure of 90S small ribosomal precursors complex with the DEAH-box RNA helicase Dhr1 (State F)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Zhang, J, An, W, Ye, K.
Deposit date:2020-09-24
Release date:2021-10-06
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structure of 90S small ribosomal precursors complex with Dhr1
To Be Published
7D63
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BU of 7d63 by Molmil
Cryo-EM structure of 90S preribosome with inactive Utp24 (state C)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Zhang, J, An, W, Ye, K.
Deposit date:2020-09-29
Release date:2021-10-06
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (12.3 Å)
Cite:Cryo-EM structure of 90S preribosome with inactive Utp24 (state C)
To Be Published
7D5T
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BU of 7d5t by Molmil
Cryo-EM structure of 90S preribosome with inactive Utp24 (state F1)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Zhang, J, An, W, Ye, K.
Deposit date:2020-09-28
Release date:2021-10-06
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Cryo-EM structure of 90S preribosome with inactive Utp24 (state F1)
To Be Published
3J16
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BU of 3j16 by Molmil
Models of ribosome-bound Dom34p and Rli1p and their ribosomal binding partners
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S24-A, ...
Authors:Becker, T, Franckenberg, S, Wickles, S, Shoemaker, C.J, Anger, A.M, Armache, J.-P, Sieber, H, Ungewickell, C, Berninghausen, O, Daberkow, I, Karcher, A, Thomm, M, Hopfner, K.-P, Green, R, Beckmann, R.
Deposit date:2011-12-12
Release date:2012-02-22
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Structural basis of highly conserved ribosome recycling in eukaryotes and archaea.
Nature, 482, 2012
7EQ4
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BU of 7eq4 by Molmil
Crystal Structure of the N-terminus of Nonstructural protein 1 from SARS-CoV-2
Descriptor: Host translation inhibitor nsp1
Authors:Liu, Y, Ke, Z, Hu, H, Zhao, K, Xiao, J, Xia, Y, Li, Y.
Deposit date:2021-04-29
Release date:2021-06-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Basis and Function of the N Terminus of SARS-CoV-2 Nonstructural Protein 1.
Microbiol Spectr, 9, 2021
3L0S
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BU of 3l0s by Molmil
Crystal structures of Zinc, Cobalt and Iron containing Adenylate kinase from Gram-negative bacteria Desulfovibrio gigas
Descriptor: Adenylate kinase, COBALT (II) ION, D(-)-TARTARIC ACID
Authors:Mukhopadhyay, A, Trincao, J, Romao, M.J.
Deposit date:2009-12-10
Release date:2010-12-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the zinc-, cobalt-, and iron-containing adenylate kinase from Desulfovibrio gigas: a novel metal-containing adenylate kinase from Gram-negative bacteria
J.Biol.Inorg.Chem., 16, 2011
1QU4
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BU of 1qu4 by Molmil
CRYSTAL STRUCTURE OF TRYPANOSOMA BRUCEI ORNITHINE DECARBOXYLASE
Descriptor: ORNITHINE DECARBOXYLASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Grishin, N.V, Osterman, A.L, Brooks, H.B, Phillips, M.A, Goldsmith, E.J.
Deposit date:1999-07-06
Release date:1999-11-17
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:X-ray structure of ornithine decarboxylase from Trypanosoma brucei: the native structure and the structure in complex with alpha-difluoromethylornithine.
Biochemistry, 38, 1999
4D1D
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BU of 4d1d by Molmil
STRUCTURE OF MHP1, A NUCLEOBASE-CATION-SYMPORT-1 FAMILY TRANSPORTER with the inhibitor 5-(2-naphthylmethyl)-L-hydantoin.
Descriptor: 5-(2-NAPHTHYLMETHYL)-D-HYDANTOIN, 5-(2-NAPHTHYLMETHYL)-L-HYDANTOIN, HYDANTOIN TRANSPORT PROTEIN, ...
Authors:Weyand, S, Brueckner, F, Geng, T, Drew, D, Iwata, S, Henderson, P.J.F, Cameron, A.D.
Deposit date:2014-05-01
Release date:2014-07-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Molecular Mechanism of Ligand Recognition by Membrane Transport Protein, Mhp1.
Embo J., 33, 2014
4D1A
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BU of 4d1a by Molmil
STRUCTURE OF MHP1, A NUCLEOBASE-CATION-SYMPORT-1 FAMILY TRANSPORTER, IN A CLOSED CONFORMATION WITH INDOLYLMETHYL-HYDANTOIN
Descriptor: (5S)-5-(1H-indol-3-ylmethyl)imidazolidine-2,4-dione, HYDANTOIN TRANSPORT PROTEIN, SODIUM ION
Authors:Weyand, S, Brueckner, F, Geng, T, Drew, D, Iwata, S, Henderson, P.J.F, Cameron, A.D.
Deposit date:2014-05-01
Release date:2014-07-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Molecular Mechanism of Ligand Recognition by Membrane Transport Protein, Mhp1.
Embo J., 33, 2014
4AU5
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BU of 4au5 by Molmil
Structure of the NhaA dimer, crystallised at low pH
Descriptor: DODECYL-ALPHA-D-MALTOSIDE, NA(+)/H(+) ANTIPORTER NHAA, SULFATE ION
Authors:Drew, D, Lee, C, Iwata, S, Cameron, A.D.
Deposit date:2012-05-14
Release date:2013-07-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.696 Å)
Cite:Crystal structure of the sodium-proton antiporter NhaA dimer and new mechanistic insights.
J. Gen. Physiol., 144, 2014
4D1B
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BU of 4d1b by Molmil
STRUCTURE OF MHP1, A NUCLEOBASE-CATION-SYMPORT-1 FAMILY TRANSPORTER, IN A CLOSED CONFORMATION WITH BENZYL-HYDANTOIN
Descriptor: (5S)-5-benzylimidazolidine-2,4-dione, HYDANTOIN TRANSPORT PROTEIN, SODIUM ION
Authors:Brueckner, F, Geng, T, Weyand, S, Drew, D, Iwata, S, Henderson, P.J.F, Cameron, A.D.
Deposit date:2014-05-01
Release date:2014-07-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Molecular Mechanism of Ligand Recognition by Membrane Transport Protein, Mhp1.
Embo J., 33, 2014
4D1C
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BU of 4d1c by Molmil
STRUCTURE OF MHP1, A NUCLEOBASE-CATION-SYMPORT-1 FAMILY TRANSPORTER, IN A CLOSED CONFORMATION WITH bromovinylhydantoin bound.
Descriptor: (5Z)-5-[(3-bromophenyl)methylidene]imidazolidine-2,4-dione, HYDANTOIN TRANSPORT PROTEIN, SODIUM ION
Authors:Weyand, S, Brueckner, F, Geng, T, Drew, D, Iwata, S, Henderson, P.J.F, Cameron, A.D.
Deposit date:2014-05-01
Release date:2014-07-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Molecular Mechanism of Ligand Recognition by Membrane Transport Protein, Mhp1.
Embo J., 33, 2014
3L0P
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BU of 3l0p by Molmil
Crystal structures of Iron containing Adenylate kinase from Desulfovibrio gigas
Descriptor: Adenylate kinase, FE (III) ION, GLYCEROL
Authors:Mukhopadhyay, A, Trincao, J, Romao, M.J.
Deposit date:2009-12-10
Release date:2010-12-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the zinc-, cobalt-, and iron-containing adenylate kinase from Desulfovibrio gigas: a novel metal-containing adenylate kinase from Gram-negative bacteria
J.Biol.Inorg.Chem., 16, 2011
7EEB
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BU of 7eeb by Molmil
Structure of the CatSpermasome
Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wu, J.P, Ke, M.
Deposit date:2021-03-18
Release date:2021-07-28
Last modified:2021-08-11
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure of a mammalian sperm cation channel complex.
Nature, 595, 2021
7EDJ
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BU of 7edj by Molmil
Cryo-EM structure of SARS-CoV-2 S-UK variant (B.1.1.7) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2 (ACE2) ectodomain, ...
Authors:Yang, T.J, Yu, P.Y, Chang, Y.C, Wu, H.C, Hsu, S.T.D.
Deposit date:2021-03-16
Release date:2021-09-01
Last modified:2022-01-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Effect of SARS-CoV-2 B.1.1.7 mutations on spike protein structure and function.
Nat.Struct.Mol.Biol., 28, 2021
1NJJ
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BU of 1njj by Molmil
Crystal structure determination of T. brucei ornithine decarboxylase bound to D-ornithine and to G418
Descriptor: GENETICIN, N~2~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-ORNITHINE, ornithine decarboxylase
Authors:Jackson, L.K, Goldsmith, E.J, Phillips, M.A.
Deposit date:2002-12-31
Release date:2003-08-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:X-ray Structure Determination of Trypanosoma brucei Ornithine Decarboxylase Bound to D-Ornithine and to G418: INSIGHTS INTO SUBSTRATE BINDING AND ODC CONFORMATIONAL FLEXIBILITY.
J.Biol.Chem., 278, 2003
3KGV
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BU of 3kgv by Molmil
Crystal Structure of Human DNA-dependent Protein Kinase Catalytic Subunit (DNA-PKcs)
Descriptor: DNA-dependent Protein Kinase Catalytic Subunit
Authors:Sibanda, B.L, Chirgadze, D.Y, Blundell, T.L.
Deposit date:2009-10-29
Release date:2009-12-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (6.6 Å)
Cite:Crystal structure of DNA-PKcs reveals a large open-ring cradle comprised of HEAT repeats.
Nature, 463, 2010
4BWZ
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BU of 4bwz by Molmil
Crystal structure of the sodium proton antiporter, NapA
Descriptor: NA(+)/H(+) ANTIPORTER, ZINC ION
Authors:Lee, C, Drew, D, Cameron, A.D.
Deposit date:2013-07-05
Release date:2013-08-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.984 Å)
Cite:A two-domain elevator mechanism for sodium/proton antiport.
Nature, 501, 2013
4ATV
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BU of 4atv by Molmil
STRUCTURE OF A TRIPLE MUTANT OF THE NHAA DIMER, CRYSTALLISED AT LOW PH
Descriptor: DODECYL-ALPHA-D-MALTOSIDE, NA(+)/H(+) ANTIPORTER NHAA, SULFATE ION
Authors:Drew, D, Lee, C, Iwata, S, Cameron, A.D.
Deposit date:2012-05-10
Release date:2013-07-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of the sodium-proton antiporter NhaA dimer and new mechanistic insights.
J. Gen. Physiol., 144, 2014
4CF7
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BU of 4cf7 by Molmil
Crystal structure of adenylate kinase from Aquifex aeolicus with MgADP bound
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ADENYLATE KINASE, ...
Authors:Kerns, S.J, Agafonov, R.V, Cho, Y.-J, Pontiggia, F, Otten, R, Pachov, D.V, Kutter, S, Phung, L.A, Murphy, P.N, Thai, V, Hagan, M.F, Kern, D.
Deposit date:2013-11-13
Release date:2014-12-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.594 Å)
Cite:The Energy Landscape of Adenylate Kinase During Catalysis.
Nat.Struct.Mol.Biol., 22, 2015
2YZD
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BU of 2yzd by Molmil
Crystal structure of uricase from Arthrobacter globiformis in complex with 8-azaxanthin (inhibitor)
Descriptor: 8-AZAXANTHINE, Uricase
Authors:Juan, E.C.M, Hossain, M.T, Hoque, M.M, Suzuki, K, Sekiguchi, T, Takenaka, A.
Deposit date:2007-05-05
Release date:2008-05-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Trapping of the uric acid substrate in the crystal structure of urate oxidase from Arthrobacter globiformis
To be Published
8S9Y
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BU of 8s9y by Molmil
Taipan Natriuretic Peptide C -TNPc
Descriptor: Peptide TNP-c
Authors:Torres, A.M, Alewood, P.F.
Deposit date:2023-03-30
Release date:2023-04-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Taipan Natriuretic Peptides Are Potent and Selective Agonists for the Natriuretic Peptide Receptor A.
Molecules, 28, 2023
6OHC
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BU of 6ohc by Molmil
E. coli Guanine Deaminase
Descriptor: GLYCEROL, Guanine deaminase, ZINC ION
Authors:Shek, R.S, French, J.B.
Deposit date:2019-04-05
Release date:2019-07-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Determinants for Substrate Selectivity in Guanine Deaminase Enzymes of the Amidohydrolase Superfamily.
Biochemistry, 58, 2019
2YZE
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BU of 2yze by Molmil
Crystal structure of uricase from Arthrobacter globiformis
Descriptor: (dihydroxyboranyloxy-hydroxy-boranyl)oxylithium, Uricase
Authors:Juan, E.C.M, Hossain, M.T, Hoque, M.M, Suzuki, K, Sekiguchi, T, Takenaka, A.
Deposit date:2007-05-05
Release date:2008-05-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Trapping of the uric acid substrate in the crystal structure of urate oxidase from Arthrobacter globiformis
To be Published
6OLI
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BU of 6oli by Molmil
Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
Authors:Li, W, Cate, J.H.D.
Deposit date:2019-04-16
Release date:2019-06-19
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis for selective stalling of human ribosome nascent chain complexes by a drug-like molecule.
Nat.Struct.Mol.Biol., 26, 2019

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