Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3ICV
DownloadVisualize
BU of 3icv by Molmil
Structural Consequences of a Circular Permutation on Lipase B from Candida Antartica
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase B
Authors:Horton, J.R, Qian, Z, Jia, D, Lutz, S, Cheng, X.
Deposit date:2009-07-18
Release date:2009-10-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structural redesign of lipase B from Candida antarctica by circular permutation and incremental truncation.
J.Mol.Biol., 393, 2009
3IGT
DownloadVisualize
BU of 3igt by Molmil
A rare nucleotide base tautomer in the structure of an asymmetric DNA junction
Descriptor: 5'-D(*CP*CP*GP*AP*GP*TP*CP*CP*TP*A)-3', 5'-D(*CP*TP*CP*AP*AP*CP*TP*CP*GP*G)-3', 5'-D(*TP*AP*GP*GP*GP*GP*CP*CP*GP*A)-3', ...
Authors:Khuu, P, Ho, P.S.
Deposit date:2009-07-28
Release date:2009-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A rare nucleotide base tautomer in the structure of an asymmetric DNA junction.
Biochemistry, 48, 2009
3IOX
DownloadVisualize
BU of 3iox by Molmil
Crystal Structure of A3VP1 of AgI/II of Streptococcus mutans
Descriptor: AgI/II, CALCIUM ION, SULFITE ION, ...
Authors:Larson, M.R, Rajashankar, K.R, Patel, M, Robinette, R, Crowley, P, Michalek, S.M, Brady, L.J, Deivanayagam, C.C.
Deposit date:2009-08-14
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Elongated fibrillar structure of a streptococcal adhesin assembled by the high-affinity association of alpha- and PPII-helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
3IPK
DownloadVisualize
BU of 3ipk by Molmil
Crystal Structure of A3VP1 of AgI/II of Streptococcus mutans
Descriptor: AgI/II, CALCIUM ION, SULFATE ION, ...
Authors:Larson, M.R, Rajashankar, K.R, Patel, M, Robinette, R, Crowley, P, Michalek, S.M, Brady, L.J, Deivanayagam, C.C.
Deposit date:2009-08-17
Release date:2010-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Elongated fibrillar structure of a streptococcal adhesin assembled by the high-affinity association of alpha- and PPII-helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
3IX9
DownloadVisualize
BU of 3ix9 by Molmil
Crystal structure of Streptococcus pneumoniae dihydrofolate reductase - Sp9 mutant
Descriptor: Dihydrofolate reductase, METHOTREXATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Yennawar, N.H.
Deposit date:2009-09-03
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Kinetic and structural characterization of dihydrofolate reductase from Streptococcus pneumoniae
Biochemistry, 49, 2010
3I7Y
DownloadVisualize
BU of 3i7y by Molmil
High pressure structure of I106A variant of RNase A (0.48 GPa)
Descriptor: CHLORIDE ION, Ribonuclease pancreatic
Authors:Lewinski, K, Kurpiewska, K, Dziubek, K, Katrusiak, A, Font, J, Ribo, M, Vilanova, M.
Deposit date:2009-07-09
Release date:2009-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural investigation of ribonuclease A conformational preferences using high pressure protein crystallography
Chem.Phys., 468, 2016
2GSM
DownloadVisualize
BU of 2gsm by Molmil
Catalytic Core (Subunits I and II) of Cytochrome c oxidase from Rhodobacter sphaeroides
Descriptor: CADMIUM ION, CALCIUM ION, COPPER (II) ION, ...
Authors:Qin, L, Hiser, C, Mulichak, A, Garavito, R.M, Ferguson-Miller, S.
Deposit date:2006-04-26
Release date:2006-10-10
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification of conserved lipid/detergent-binding sites in a high-resolution structure of the membrane protein cytochrome c oxidase.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2GL1
DownloadVisualize
BU of 2gl1 by Molmil
NMR solution structure of Vigna radiata Defensin 2 (VrD2)
Descriptor: PDF1
Authors:Lin, K.F, Lee, T.R, Tsai, P.H, Hsu, M.P, Chen, C.S, Lyu, P.C.
Deposit date:2006-04-04
Release date:2007-04-03
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structure-based protein engineering for alpha-amylase inhibitory activity of plant defensin.
Proteins, 68, 2007
3IL3
DownloadVisualize
BU of 3il3 by Molmil
Structure of Haemophilus influenzae FabH
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 3
Authors:Gajiwala, K.S, Margosiak, S, Lu, J, Cortez, J, Su, Y, Nie, Z, Appelt, K.
Deposit date:2009-08-06
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of bacterial FabH suggest a molecular basis for the substrate specificity of the enzyme.
Febs Lett., 583, 2009
2GSX
DownloadVisualize
BU of 2gsx by Molmil
Complement Receptor Type 2
Descriptor: Complement receptor type 2
Authors:Gilbert, H.E, Asokan, R, Holers, V.M, Perkins, S.J.
Deposit date:2006-04-27
Release date:2006-09-26
Last modified:2024-02-14
Method:SOLUTION SCATTERING
Cite:The 15 SCR Flexible Extracellular Domains of Human Complement Receptor Type 2 can Mediate Multiple Ligand and Antigen Interactions.
J.Mol.Biol., 362, 2006
2GTL
DownloadVisualize
BU of 2gtl by Molmil
Lumbricus Erythrocruorin at 3.5A resolution
Descriptor: CALCIUM ION, CARBON MONOXIDE, Extracellular globin 2, ...
Authors:Royer Jr, W.E, Sharma, H, Strand, K, Knapp, J.E, Bhyravbhatla, B.
Deposit date:2006-04-28
Release date:2006-07-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Lumbricus erythrocruorin at 3.5 a resolution: architecture of a megadalton respiratory complex.
Structure, 14, 2006
2H12
DownloadVisualize
BU of 2h12 by Molmil
Structure of Acetobacter aceti citrate synthase complexed with oxaloacetate and carboxymethyldethia coenzyme A (CMX)
Descriptor: CARBOXYMETHYLDETHIA COENZYME *A, Citrate synthase, OXALOACETATE ION, ...
Authors:Starks, C.M, Kappock, T.J.
Deposit date:2006-05-15
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of a NADH-insensitive hexameric citrate synthase that resists acid inactivation.
Biochemistry, 45, 2006
3ILV
DownloadVisualize
BU of 3ilv by Molmil
Crystal structure of a glutamine-dependent NAD(+) synthetase from Cytophaga hutchinsonii
Descriptor: Glutamine-dependent NAD(+) synthetase
Authors:Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-07
Release date:2009-08-18
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of a glutamine-dependent NAD(+) synthetase from Cytophaga hutchinsonii
To be Published
3IUJ
DownloadVisualize
BU of 3iuj by Molmil
apPEP_WT2 opened state
Descriptor: Prolyl endopeptidase
Authors:Chiu, T.K.
Deposit date:2009-08-31
Release date:2010-05-05
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Induced-fit mechanism for prolyl endopeptidase
J.Biol.Chem., 285, 2010
3I81
DownloadVisualize
BU of 3i81 by Molmil
Crystal structure of insulin-like growth factor 1 receptor (IGF-1R-WT) complex with BMS-754807 [1-(4-((5-cyclopropyl-1H-pyrazol-3-yl)amino)pyrrolo[2,1-f][1,2,4]triazin-2-yl)-N-(6-fluoro-3-pyridinyl)-2-methyl-L-prolinamide]
Descriptor: 1-{4-[(3-cyclopropyl-1H-pyrazol-5-yl)amino]pyrrolo[2,1-f][1,2,4]triazin-2-yl}-N-(6-fluoropyridin-3-yl)-2-methyl-L-proli namide, Insulin-like growth factor 1 receptor
Authors:Sack, J.S.
Deposit date:2009-07-09
Release date:2009-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Discovery of a 2,4-disubstituted pyrrolo[1,2-f][1,2,4]triazine inhibitor (BMS-754807) of insulin-like growth factor receptor (IGF-1R) kinase in clinical development.
J.Med.Chem., 52, 2009
3I7W
DownloadVisualize
BU of 3i7w by Molmil
High pressure structure of wild-type RNase A (0.67 GPa)
Descriptor: CHLORIDE ION, Ribonuclease pancreatic
Authors:Lewinski, K, Kurpiewska, K, Dziubek, K, Katrusiak, A, Font, J, Ribo, M, Vilanova, M.
Deposit date:2009-07-09
Release date:2009-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural investigation of ribonuclease A conformational preferences using high pressure protein crystallography
Chem.Phys., 468, 2016
3ICW
DownloadVisualize
BU of 3icw by Molmil
Structure of a Circular Permutation on Lipase B from Candida Antartica with Bound Suicide Inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase B, PHOSPHATE ION, ...
Authors:Horton, J.R, Qian, Z, Jia, D, Lutz, S.A, Cheng, X.
Deposit date:2009-07-18
Release date:2009-10-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural redesign of lipase B from Candida antarctica by circular permutation and incremental truncation.
J.Mol.Biol., 393, 2009
3IQM
DownloadVisualize
BU of 3iqm by Molmil
Active site mutants of B. subtilis SecA
Descriptor: Protein translocase subunit secA, SULFATE ION
Authors:Kim, D, Hunt, J.F.
Deposit date:2009-08-20
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:ATPase Active-Site Electrostatic Interactions Control the Global Conformation of the 100 kDa SecA Translocase.
J.Am.Chem.Soc., 135, 2013
3IWZ
DownloadVisualize
BU of 3iwz by Molmil
The c-di-GMP Responsive Global Regulator CLP Links Cell-Cell Signaling to Virulence Gene Expression in Xanthomonas campestris
Descriptor: Catabolite activation-like protein
Authors:Chin, K.H, Tu, Z.L, Tseng, Y.H, Dow, J.M, Wang, A.H.J, Chou, S.H.
Deposit date:2009-09-03
Release date:2009-12-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The cAMP receptor-like protein CLP is a novel c-di-GMP receptor linking cell-cell signaling to virulence gene expression in Xanthomonas campestris.
J.Mol.Biol., 396, 2010
3IUM
DownloadVisualize
BU of 3ium by Molmil
apPEP_WTX opened state
Descriptor: GLYCEROL, Prolyl Endopeptidase
Authors:Chiu, T.K.
Deposit date:2009-08-31
Release date:2010-05-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Induced-fit mechanism for prolyl endopeptidase
J.Biol.Chem., 285, 2010
3IV1
DownloadVisualize
BU of 3iv1 by Molmil
Coiled-coil domain of tumor susceptibility gene 101
Descriptor: CHLORIDE ION, SULFATE ION, Tumor susceptibility gene 101 protein
Authors:Neculai, D, Avvakumov, G.V, Wernimont, A.K, Xue, S, Walker, J.R, Li, Y, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2009-08-31
Release date:2009-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Coiled-Coil Domain of Human Tsg101
To be Published
7EQ9
DownloadVisualize
BU of 7eq9 by Molmil
Cryo-EM structure of designed protein nanoparticle TIP60 (Truncated Icosahedral Protein composed of 60-mer fusion proteins)
Descriptor: TIP60
Authors:Obata, J, Kawakami, N, Tsutsumi, A, Miyamoto, K, Kikkawa, M, Arai, R.
Deposit date:2021-04-30
Release date:2021-09-15
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Icosahedral 60-meric porous structure of designed supramolecular protein nanoparticle TIP60.
Chem.Commun.(Camb.), 57, 2021
3KD9
DownloadVisualize
BU of 3kd9 by Molmil
Crystal structure of pyridine nucleotide disulfide oxidoreductase from Pyrococcus horikoshii
Descriptor: Coenzyme A disulfide reductase, GLYCEROL
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-22
Release date:2009-11-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of pyridine nucleotide disulfide oxidoreductase from Pyrococcus horikoshii
To be Published
3KCF
DownloadVisualize
BU of 3kcf by Molmil
Crystal structure of TGFbRI complexed with a pyrazolone inhibitor
Descriptor: 4-[3-(methoxymethyl)phenyl]-1,2-dimethyl-5-quinoxalin-6-yl-1,2-dihydro-3H-pyrazol-3-one, PHOSPHATE ION, TGF-beta receptor type-1
Authors:Boriack-Sjodin, P.A.
Deposit date:2009-10-21
Release date:2009-12-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Pyrazolone based TGFbetaR1 kinase inhibitors.
Bioorg.Med.Chem.Lett., 20, 2010
7EYD
DownloadVisualize
BU of 7eyd by Molmil
Cryo-EM structure of cyanobacterial phycobilisome from Anabaena sp. PCC 7120
Descriptor: Allophycocyanin subunit alpha 1, Allophycocyanin subunit alpha-B, Allophycocyanin subunit beta, ...
Authors:Zheng, L, Zheng, Z, Li, X, Wang, G, Zhang, K, Wei, P, Zhao, J, Gao, N.
Deposit date:2021-05-30
Release date:2021-10-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural insight into the mechanism of energy transfer in cyanobacterial phycobilisomes.
Nat Commun, 12, 2021

222624

건을2024-07-17부터공개중

PDB statisticsPDBj update infoContact PDBjnumon