Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6IV6
DownloadVisualize
BU of 6iv6 by Molmil
Cryo-EM structure of AcrVA5-acetylated MbCas12a in complex with crRNA
Descriptor: RNA (59-MER), nuclease
Authors:Dong, L, Li, N, Guan, X, Zhu, Y, Gao, N, Huang, Z.
Deposit date:2018-12-02
Release date:2019-04-10
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:An anti-CRISPR protein disables type V Cas12a by acetylation.
Nat. Struct. Mol. Biol., 26, 2019
5LWA
DownloadVisualize
BU of 5lwa by Molmil
TURNIP YELLOW MOSAIC VIRUS PROTEASE/DEUBIQUITINASE DOMAIN, I847A MUTANT
Descriptor: RNA replicase polyprotein
Authors:Ayach, M, Bressanelli, S.
Deposit date:2016-09-15
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.653 Å)
Cite:A mobile loop near the active site acts as a switch between the dual activities of a viral protease/deubiquitinase.
PLoS Pathog., 13, 2017
5F5F
DownloadVisualize
BU of 5f5f by Molmil
X-ray structure of Roquin ROQ domain in complex with a Selex-derived hexa-loop RNA motif
Descriptor: RNA (5'-R(P*UP*GP*AP*CP*UP*GP*CP*GP*UP*UP*UP*UP*AP*GP*GP*AP*GP*UP*UP*A)-3'), Roquin-1
Authors:Janowski, R, Schlundt, A, Sattler, M, Niessing, D.
Deposit date:2015-12-04
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Roquin recognizes a non-canonical hexaloop structure in the 3'-UTR of Ox40.
Nat Commun, 7, 2016
8PTX
DownloadVisualize
BU of 8ptx by Molmil
Cryo-EM structure of human Elp123 in complex with tRNA, acetyl-CoA, 5'-deoxyadenosine and methionine
Descriptor: 5'-DEOXYADENOSINE, ACETYL COENZYME *A, Elongator complex protein 1, ...
Authors:Abbassi, N, Jaciuk, M, Lin, T.-Y, Glatt, S.
Deposit date:2023-07-16
Release date:2024-04-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Cryo-EM structures of the human Elongator complex at work.
Nat Commun, 15, 2024
2YMZ
DownloadVisualize
BU of 2ymz by Molmil
Crystal structure of chicken Galectin 2
Descriptor: GALECTIN 2, SULFATE ION, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Fernandez, I.S, Ruiz, F.M, Solis, D, Gabius, H.-J, Romero, A.
Deposit date:2012-10-11
Release date:2013-08-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Fine-Tuning of Prototype Chicken Galectins: Structure of Cg-2 and Structure-Activity Correlations
Acta Crystallogr.,Sect.D, 69, 2013
8DPG
DownloadVisualize
BU of 8dpg by Molmil
Cryo-EM structure of the 5HT2C receptor (INI isoform) bound to psilocin
Descriptor: 3-[2-(dimethylamino)ethyl]-1~{H}-indol-4-ol, 5-hydroxytryptamine receptor 2C, Antibody fragment scFv16, ...
Authors:Gumpper, R.H, Fay, J.F, Roth, B.L.
Deposit date:2022-07-15
Release date:2022-08-24
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Molecular insights into the regulation of constitutive activity by RNA editing of 5HT 2C serotonin receptors.
Cell Rep, 40, 2022
8DPI
DownloadVisualize
BU of 8dpi by Molmil
Cryo-EM structure of the 5HT2C receptor (VSV isoform) bound to lorcaserin
Descriptor: (1R)-8-chloro-1-methyl-2,3,4,5-tetrahydro-1H-3-benzazepine, 5-hydroxytryptamine receptor 2C, Antibody fragment scFv16, ...
Authors:Gumpper, R.H, Fay, J.F, Roth, B.L.
Deposit date:2022-07-15
Release date:2022-08-24
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular insights into the regulation of constitutive activity by RNA editing of 5HT 2C serotonin receptors.
Cell Rep, 40, 2022
8DPF
DownloadVisualize
BU of 8dpf by Molmil
Cryo-EM structure of the 5HT2C receptor (INI isoform) bound to lorcaserin
Descriptor: (1R)-8-chloro-1-methyl-2,3,4,5-tetrahydro-1H-3-benzazepine, 5-hydroxytryptamine receptor 2C, Antibody fragment scFv16, ...
Authors:Gumpper, R.H, Fay, J.F, Roth, B.L.
Deposit date:2022-07-15
Release date:2022-08-24
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Molecular insights into the regulation of constitutive activity by RNA editing of 5HT 2C serotonin receptors.
Cell Rep, 40, 2022
8DPH
DownloadVisualize
BU of 8dph by Molmil
Cryo-EM structure of the 5HT2C receptor (VGV isoform) bound to lorcaserin
Descriptor: (1R)-8-chloro-1-methyl-2,3,4,5-tetrahydro-1H-3-benzazepine, 5-hydroxytryptamine receptor 2C, Antibody fragment scFv16, ...
Authors:Gumpper, R.H, Fay, J.F, Roth, B.L.
Deposit date:2022-07-15
Release date:2022-08-24
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular insights into the regulation of constitutive activity by RNA editing of 5HT 2C serotonin receptors.
Cell Rep, 40, 2022
8QGT
DownloadVisualize
BU of 8qgt by Molmil
5'vRNA-bound Hantaan virus polymerase in monomeric intermediate state
Descriptor: RNA (5'-R(P*UP*AP*GP*UP*AP*GP*UP*AP*GP*AP*CP*A)-3'), RNA-directed RNA polymerase L
Authors:Durieux Trouilleton, Q, Arragain, B, Malet, H.
Deposit date:2023-09-05
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural characterization of the oligomerization of full-length Hantaan virus polymerase into symmetric dimers and hexamers.
Nat Commun, 15, 2024
7ZOQ
DownloadVisualize
BU of 7zoq by Molmil
Cryo-EM structure of a CRISPR effector in complex with a caspase regulator
Descriptor: RNA (39-MER), TPR-CHAT, ZINC ION, ...
Authors:Babatunde, E.E, Davide, T, Bertrand, B, Sergey, N, Alexander, M, Henning, S, Dong, C.N.
Deposit date:2022-04-26
Release date:2022-11-30
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into the regulation of Cas7-11 by TPR-CHAT.
Nat.Struct.Mol.Biol., 30, 2023
7F4G
DownloadVisualize
BU of 7f4g by Molmil
Structure of RPAP2-bound RNA polymerase II
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Chen, X, Qi, Y, Wang, X, Li, J, Zhao, D, Xu, Y.
Deposit date:2021-06-18
Release date:2021-07-07
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:RPAP2 regulates a transcription initiation checkpoint by inhibiting assembly of pre-initiation complex.
Cell Rep, 39, 2022
2BAY
DownloadVisualize
BU of 2bay by Molmil
Crystal structure of the Prp19 U-box dimer
Descriptor: Pre-mRNA splicing factor PRP19
Authors:Vander Kooi, C.W, Ohi, M.D, Rosenberg, J.A, Oldham, M.L, Newcomer, M.E, Gould, K.L, Chazin, W.J.
Deposit date:2005-10-15
Release date:2006-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Prp19 U-box Crystal Structure Suggests a Common Dimeric Architecture for a Class of Oligomeric E3 Ubiquitin Ligases.
Biochemistry, 45, 2006
7N06
DownloadVisualize
BU of 7n06 by Molmil
SARS-CoV-2 Nsp15 endoribonuclease post-cleavage state
Descriptor: RNA (5'-R(*AP*UP*A)-3'), Uridylate-specific endoribonuclease
Authors:Frazier, M.N, Dillard, L.B, Krahn, J.M, Stanley, R.E.
Deposit date:2021-05-25
Release date:2021-06-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Characterization of SARS2 Nsp15 nuclease activity reveals it's mad about U.
Nucleic Acids Res., 49, 2021
7N33
DownloadVisualize
BU of 7n33 by Molmil
SARS-CoV-2 Nsp15 endoribonuclease pre-cleavage state
Descriptor: RNA (5'-R(*A)-D(*(UFT))-R(P*A)-3'), Uridylate-specific endoribonuclease
Authors:Frazier, M.N, Dillard, L.B, Krahn, J.M, Stanley, R.E.
Deposit date:2021-05-31
Release date:2021-06-09
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Characterization of SARS2 Nsp15 nuclease activity reveals it's mad about U.
Nucleic Acids Res., 49, 2021
2M3X
DownloadVisualize
BU of 2m3x by Molmil
Solution structure of Ph1500: a homohexameric protein centered on a 12-bladed beta-propeller
Descriptor: PH1500
Authors:Varnay, I, Truffault, V, Kessler, H, Coles, M.
Deposit date:2013-01-28
Release date:2014-01-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of Ph1500: a homohexameric protein centered on a 12-bladed beta-propeller
To be Published
2MXL
DownloadVisualize
BU of 2mxl by Molmil
Structural features of a 3' splice site in influenza A: 39-nt hairpin
Descriptor: RNA (39-MER)
Authors:Turner, D.H, Kennedy, S.D, Chen, J.L.
Deposit date:2015-01-06
Release date:2015-05-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural features of a 3' splice site in influenza a.
Biochemistry, 54, 2015
7MW8
DownloadVisualize
BU of 7mw8 by Molmil
Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase
Descriptor: Phosphodiesterase-nucleotide pyrophosphatase, ZINC ION, pApG
Authors:Fernandez, D, Li, L, Brown, J.A.
Deposit date:2021-05-15
Release date:2022-05-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:ENPP1's regulation of extracellular cGAMP is a ubiquitous mechanism of attenuating STING signaling.
Proc.Natl.Acad.Sci.USA, 119, 2022
5ZSY
DownloadVisualize
BU of 5zsy by Molmil
RBM10-RRM2 domain and its lung cancer related mutant
Descriptor: RNA-binding protein 10
Authors:Qin, H.
Deposit date:2018-04-30
Release date:2019-06-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural, dynamics, and RNA binding comparison between RBM10-RRM2 domain and its lung cancer related mutation.
To be published
7Q7X
DownloadVisualize
BU of 7q7x by Molmil
Crystal structure of the methyltransferase-ribozyme 1 (with 1-methyl-adenosine)
Descriptor: GUANINE, MAGNESIUM ION, RNA 1, ...
Authors:Mieczkowski, M, Hoebartner, C.
Deposit date:2021-11-09
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and mechanism of the methyltransferase ribozyme MTR1.
Nat.Chem.Biol., 18, 2022
7Q80
DownloadVisualize
BU of 7q80 by Molmil
Crystal structure of the methyltransferase-ribozyme 1, no Magnesium condition (with 1-methyl-adenosine)
Descriptor: GUANINE, RNA 1, RNA 2, ...
Authors:Mieczkowski, M, Hoebartner, C.
Deposit date:2021-11-09
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Structure and mechanism of the methyltransferase ribozyme MTR1.
Nat.Chem.Biol., 18, 2022
7Q82
DownloadVisualize
BU of 7q82 by Molmil
Crystal structure of the methyltransferase-ribozyme 1, Thallium derivative (with 1-methyl-adenosine)
Descriptor: GUANINE, MAGNESIUM ION, RNA 1, ...
Authors:Mieczkowski, M, Hoebartner, C.
Deposit date:2021-11-09
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure and mechanism of the methyltransferase ribozyme MTR1.
Nat.Chem.Biol., 18, 2022
7Q7Y
DownloadVisualize
BU of 7q7y by Molmil
Crystal structure of the methyltransferase-ribozyme 1 (1-benzyl-adenosine derivative)
Descriptor: GUANINE, MAGNESIUM ION, RNA 1, ...
Authors:Mieczkowski, M, Hoebartner, C.
Deposit date:2021-11-09
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and mechanism of the methyltransferase ribozyme MTR1.
Nat.Chem.Biol., 18, 2022
7Q7Z
DownloadVisualize
BU of 7q7z by Molmil
Crystal structure of the methyltransferase-ribozyme 1 (with 1-benzylamine-adenosine)
Descriptor: GUANINE, MAGNESIUM ION, RNA 1, ...
Authors:Mieczkowski, M, Hoebartner, C.
Deposit date:2021-11-09
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.26 Å)
Cite:Structure and mechanism of the methyltransferase ribozyme MTR1.
Nat.Chem.Biol., 18, 2022
5ZSW
DownloadVisualize
BU of 5zsw by Molmil
RBM10-RRM2 domain and its lung cancer related mutant
Descriptor: RNA-binding protein 10
Authors:Qin, H.
Deposit date:2018-04-30
Release date:2019-05-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural, dynamics, and RNA binding comparison between RBM10-RRM2 domain and its lung cancer related mutation.
To be published

223790

건을2024-08-14부터공개중

PDB statisticsPDBj update infoContact PDBjnumon