PDB: 2606 resultsInfo pagesStatus searchChemie searchBIRD

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5XOD	Crystal structure of human Smad2-Ski complex Descriptor: Mothers against decapentaplegic homolog 2, Ski oncogene Authors: Miyazono, K, Moriwaki, S, Ito, T, Tanokura, M. Deposit date: 2017-05-27 Release date: 2018-03-28 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.851 Å) Cite: Hydrophobic patches on SMAD2 and SMAD3 determine selective binding to cofactors Sci Signal, 11, 2018
4AC0	TETR(B) IN COMPLEX WITH MINOCYCLINE AND MAGNESIUM Descriptor: (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, MAGNESIUM ION, PHOSPHATE ION, ... Authors: Volkers, G, Hinrichs, W. Deposit date: 2011-12-12 Release date: 2012-12-26 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Tetr(B) in Complex with Minocycline and Magnesium To be Published
7TDP	Structure of Paenibacillus polymyxa GS bound to Met-Sox-P-ADP (Transition state complex) to 1.98 Angstom Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, ... Authors: Schumacher, M.A. Deposit date: 2022-01-02 Release date: 2022-06-29 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.98 Å) Cite: Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria. Nat Commun, 13, 2022
7SMD	p107 pocket domain complexed with EID1 peptide Descriptor: EP300-interacting inhibitor of differentiation 1, Retinoblastoma-like protein 1, SULFATE ION Authors: Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M. Deposit date: 2021-10-25 Release date: 2022-06-29 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family. Structure, 30, 2022
3OQM	structure of ccpa-hpr-ser46p-ackA2 complex Descriptor: 5'-D(*TP*TP*GP*AP*TP*AP*AP*CP*GP*CP*TP*TP*AP*CP*AP*A)-3', 5'-D(*TP*TP*GP*TP*AP*AP*GP*CP*GP*TP*TP*AP*TP*CP*AP*A)-3', Catabolite control protein A, ... Authors: Schumacher, M.A, Sprehe, M, Bartholomae, M, Hillen, W, Brennan, R.G. Deposit date: 2010-09-03 Release date: 2010-12-08 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.96 Å) Cite: Structures of carbon catabolite protein A-(HPr-Ser46-P) bound to diverse catabolite response element sites reveal the basis for high-affinity binding to degenerate DNA operators. Nucleic Acids Res., 39, 2011
7SME	p107 pocket domain complexed with HDAC1 peptide Descriptor: Histone deacetylase 1, Retinoblastoma-like protein 1, SULFATE ION Authors: Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M. Deposit date: 2021-10-25 Release date: 2022-06-29 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.64 Å) Cite: Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family. Structure, 30, 2022
7TDV	Crystal structure of S. aureus glutamine synthetase in Met-Sox-P/ADP transition state complex Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, ... Authors: Schumacher, M.A. Deposit date: 2022-01-03 Release date: 2022-06-29 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.92 Å) Cite: Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria. Nat Commun, 13, 2022
7SMF	p107 pocket domain complexed with mutated HDAC1-3X peptide Descriptor: Histone deacetylase 1, Retinoblastoma-like protein 1, SULFATE ION Authors: Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M. Deposit date: 2021-10-25 Release date: 2022-06-29 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family. Structure, 30, 2022
7TEN	Crystal structure of the Listeria monocytogenes GS-Met-Sox-P- ADP complex to 3.5 Angstrom Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE Authors: Schumacher, M.A. Deposit date: 2022-01-05 Release date: 2022-06-29 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria. Nat Commun, 13, 2022
7SMC	p107 pocket domain complexed with ARID4A peptide Descriptor: AT-rich interactive domain-containing protein 4A, Retinoblastoma-like protein 1, SULFATE ION Authors: Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M. Deposit date: 2021-10-25 Release date: 2022-06-29 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family. Structure, 30, 2022
1B0F	CRYSTAL STRUCTURE OF HUMAN NEUTROPHIL ELASTASE WITH MDL 101, 146 Descriptor: 1-{3-METHYL-2-[4-(MORPHOLINE-4-CARBONYL)-BENZOYLAMINO]-BUTYRYL}-PYRROLIDINE-2-CARBOXYLIC ACID (3,3,4,4,4-PENTAFLUORO-1-ISOPROPYL-2-OXO-BUTYL)-AMIDE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (ELASTASE) Authors: Schreuder, H.A, Metz, W.A, Peet, N.P, Pelton, J.T, Tardif, C. Deposit date: 1998-11-09 Release date: 1998-11-09 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (3 Å) Cite: Inhibition of human neutrophil elastase. 4. Design, synthesis, X-ray crystallographic analysis, and structure-activity relationships for a series of P2-modified, orally active peptidyl pentafluoroethyl ketones. J.Med.Chem., 41, 1998
3BR1	Crystal Structure of the Complex of Dequalinium Bound to QacR(E90Q), a Mutant of a Multidrug Binding Transcriptional Repressor Descriptor: DEQUALINIUM, HTH-type transcriptional regulator qacR, SULFATE ION Authors: Brooks, B.E. Deposit date: 2007-12-20 Release date: 2008-12-23 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (3.31 Å) Cite: Formal electrostatic interactions do not govern QacR-cation affinity To be Published
3BR5	Crystal Structure of the Complex of Rhodamine 6G Bound to QacR(E90Q), a Mutant of a Multidrug Binding Transcriptional Repressor Descriptor: HTH-type transcriptional regulator qacR, RHODAMINE 6G, SULFATE ION Authors: Brooks, B.E. Deposit date: 2007-12-20 Release date: 2008-12-23 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Formal electrostatic interactions do not govern QacR-cation affinity To be Published
3BR6	Crystal Structure of the Complex of Rhodamine 6G Bound to QacR(E120Q), a Mutant of a Multidrug Binding Transcriptional Repressor Descriptor: HTH-type transcriptional regulator qacR, RHODAMINE 6G, SULFATE ION Authors: Brooks, B.E. Deposit date: 2007-12-20 Release date: 2008-12-23 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Formal electrostatic interactions do not govern QacR-cation affinity To be Published
3BR2	Crystal Structure of the Complex of Dequalinium Bound to QacR(E120Q), a Mutant of a Multidrug Binding Transcriptional Repressor Descriptor: DEQUALINIUM, HTH-type transcriptional regulator qacR, SULFATE ION Authors: Brooks, B.E. Deposit date: 2007-12-20 Release date: 2008-12-23 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Formal electrostatic interactions do not govern QacR-cation affinity To be Published
4ZLX	N-terminal DNA binding domain of the antitoxin Phd from phage P1 Descriptor: ACETATE ION, Antitoxin phd Authors: Garcia-Pino, A, Loris, R. Deposit date: 2015-05-01 Release date: 2016-04-20 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.31 Å) Cite: An intrinsically disordered entropic switch determines allostery in Phd-Doc regulation. Nat.Chem.Biol., 12, 2016
5U4I	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Zeng, F, Chen, Y, Remis, J, Shekhar, M, Phillips, J.C, Tajkhorshid, E, Jin, H. Deposit date: 2016-12-04 Release date: 2017-01-11 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structural basis of co-translational quality control by ArfA and RF2 bound to ribosome. Nature, 541, 2017
3BR3	Crystal Structure of the Complex of Ethidium Bound to QacR(E90Q), a Mutant of a Multidrug Binding Transcriptional Repressor Descriptor: ETHIDIUM, HTH-type transcriptional regulator qacR, SULFATE ION Authors: Brooks, B.E. Deposit date: 2007-12-20 Release date: 2008-12-23 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Formal electrostatic interactions do not govern QacR-cation affinity To be Published
1A04	THE STRUCTURE OF THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL IN THE MONOCLINIC C2 CRYSTAL FORM Descriptor: NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL Authors: Baikalov, I, Schroder, I, Kaczor-Grzeskowiak, M, Cascio, D, Gunsalus, R.P, Dickerson, R.E. Deposit date: 1997-12-08 Release date: 1998-03-18 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.2 Å) Cite: NarL dimerization? Suggestive evidence from a new crystal form Biochemistry, 37, 1998
4RTS	Complex of Escherichia coli DNA Adenine Methyltransferase (DAM) with AdoMet and a 5-bp non-canonical site (GTCTA) Descriptor: DNA (5'-D(*AP*CP*TP*TP*AP*GP*AP*CP*TP*TP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*GP*TP*CP*TP*AP*AP*G)-3'), DNA adenine methylase, ... Authors: Horton, J.R, Cheng, X. Deposit date: 2014-11-15 Release date: 2015-04-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.49 Å) Cite: Structures of Escherichia coli DNA adenine methyltransferase (Dam) in complex with a non-GATC sequence: potential implications for methylation-independent transcriptional repression. Nucleic Acids Res., 43, 2015
4RTR	Complex of Escherichia coli DNA Adenine Methyltransferase (DAM) with AdoMet and a 5-bp non-canonical site (GTTTA ) Descriptor: DNA (5'-D(*AP*CP*TP*TP*AP*AP*AP*CP*TP*TP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*AP*AP*GP*TP*TP*TP*AP*AP*G)-3'), DNA adenine methylase, ... Authors: Horton, J.R, Cheng, X. Deposit date: 2014-11-15 Release date: 2015-04-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.393 Å) Cite: Structures of Escherichia coli DNA adenine methyltransferase (Dam) in complex with a non-GATC sequence: potential implications for methylation-independent transcriptional repression. Nucleic Acids Res., 43, 2015
4RTO	Complex of Escherichia coli DNA Adenine Methyltransferase (DAM) with Sinefungin and with DNA Containing Proximal Pap Regulon Sequence Descriptor: DNA (5'-D(*AP*CP*GP*AP*TP*CP*TP*TP*TP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*AP*AP*AP*GP*AP*TP*CP*G)-3'), DNA adenine methylase, ... Authors: Horton, J.R, Cheng, X. Deposit date: 2014-11-15 Release date: 2015-04-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.69 Å) Cite: Structures of Escherichia coli DNA adenine methyltransferase (Dam) in complex with a non-GATC sequence: potential implications for methylation-independent transcriptional repression. Nucleic Acids Res., 43, 2015
4RTJ	A non-cognate complex of Escherichia coli DNA Adenine Methyltransferase (DAM) with DNA and Sinefungin Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*TP*CP*TP*AP*GP*AP*TP*CP*TP*AP*GP*A)-3'), DNA adenine methylase, ... Authors: Horton, J.R, Cheng, X. Deposit date: 2014-11-15 Release date: 2015-04-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Structures of Escherichia coli DNA adenine methyltransferase (Dam) in complex with a non-GATC sequence: potential implications for methylation-independent transcriptional repression. Nucleic Acids Res., 43, 2015
4RTQ	Complex of Escherichia coli DNA Adenine Methyltransferase (DAM) with AdoHcy and a 5-bp non-canonical site (GTTTA ) Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*AP*CP*TP*TP*AP*AP*AP*CP*TP*TP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*AP*AP*GP*TP*TP*TP*AP*AP*G)-3'), ... Authors: Horton, J.R, Cheng, X. Deposit date: 2014-11-15 Release date: 2015-04-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.997 Å) Cite: Structures of Escherichia coli DNA adenine methyltransferase (Dam) in complex with a non-GATC sequence: potential implications for methylation-independent transcriptional repression. Nucleic Acids Res., 43, 2015
4RTN	Complex of Escherichia coli DNA Adenine Methyltransferase (DAM) with AdoHcy and with DNA Containing Proximal Pap Regulon Sequence Descriptor: DNA (5'-D(*AP*CP*GP*AP*TP*CP*TP*TP*TP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*AP*AP*AP*GP*AP*TP*CP*G)-3'), DNA adenine methylase, ... Authors: Horton, J.R, Cheng, X. Deposit date: 2014-11-15 Release date: 2015-04-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.59 Å) Cite: Structures of Escherichia coli DNA adenine methyltransferase (Dam) in complex with a non-GATC sequence: potential implications for methylation-independent transcriptional repression. Nucleic Acids Res., 43, 2015

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