PDB: 2044 resultsInfo pagesStatus searchChemie searchBIRD

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6G18	Cryo-EM structure of a late human pre-40S ribosomal subunit - State C Descriptor: 40S ribosomal protein S11, 40S ribosomal protein S12, 40S ribosomal protein S13, ... Authors: Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2018-03-20 Release date: 2018-06-06 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6G4S	Cryo-EM structure of a late human pre-40S ribosomal subunit - State B Descriptor: 40S ribosomal protein S11, 40S ribosomal protein S13, 40S ribosomal protein S14, ... Authors: Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2018-03-28 Release date: 2018-06-06 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (4 Å) Cite: Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6G5H	Cryo-EM structure of a late human pre-40S ribosomal subunit - Mature Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2018-03-29 Release date: 2018-06-06 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6D90	Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1. Descriptor: 18S rRNA, 28S rRNA, 5.8S rRNA, ... Authors: Pisareva, V.P, Pisarev, A.V, Fernandez, I.S. Deposit date: 2018-04-27 Release date: 2018-06-06 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Dual tRNA mimicry in the Cricket Paralysis Virus IRES uncovers an unexpected similarity with the Hepatitis C Virus IRES. Elife, 7, 2018
6G5I	Cryo-EM structure of a late human pre-40S ribosomal subunit - State R Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2018-03-29 Release date: 2018-06-06 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6G4W	Cryo-EM structure of a late human pre-40S ribosomal subunit - State A Descriptor: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S13, ... Authors: Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2018-03-28 Release date: 2018-06-06 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6G51	Cryo-EM structure of a late human pre-40S ribosomal subunit - State D Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2018-03-28 Release date: 2018-06-06 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
5XUY	Crystal structure of ATG101-ATG13HORMA Descriptor: Autophagy-related protein 101, Autophagy-related protein 13 Authors: Kim, B.-W, Song, H.K. Deposit date: 2017-06-26 Release date: 2018-07-04 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (2.2 Å) Cite: The C-terminal region of ATG101 bridges ULK1 and PtdIns3K complex in autophagy initiation. Autophagy, 14, 2018
5XV6	Crystal structure of ATG101-ATG13HORMA Descriptor: Autophagy-related protein 101, Autophagy-related protein 13 Authors: Kim, B.-W, Song, H.K. Deposit date: 2017-06-26 Release date: 2018-07-04 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.455 Å) Cite: The C-terminal region of ATG101 bridges ULK1 and PtdIns3K complex in autophagy initiation. Autophagy, 14, 2018
5XV4	Crystal structure of ATG101-ATG13HORMA Descriptor: Autophagy-related protein 101, Autophagy-related protein 13 Authors: Kim, B.-W, Song, H.K. Deposit date: 2017-06-26 Release date: 2018-07-04 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.95 Å) Cite: The C-terminal region of ATG101 bridges ULK1 and PtdIns3K complex in autophagy initiation. Autophagy, 14, 2018
5XV3	Crystal structure of ATG101-ATG13HORMA Descriptor: Autophagy-related protein 101, Autophagy-related protein 13, DI(HYDROXYETHYL)ETHER Authors: Kim, B.-W, Song, H.K. Deposit date: 2017-06-26 Release date: 2018-07-04 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.57 Å) Cite: The C-terminal region of ATG101 bridges ULK1 and PtdIns3K complex in autophagy initiation. Autophagy, 14, 2018
5WD6	bovine salivary protein form 30b Descriptor: CALCIUM ION, Short palate, lung and nasal epithelium carcinoma-associated protein 2B Authors: Zhang, H, Arcus, V.L. Deposit date: 2017-07-04 Release date: 2018-07-11 Last modified: 2019-07-24 Method: X-RAY DIFFRACTION (2 Å) Cite: The three dimensional structure of Bovine Salivary Protein 30b (BSP30b) and its interaction with specific rumen bacteria. Plos One, 14, 2019
6GQV	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP) Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... Authors: Pellegrino, S, Yusupov, M, Yusupova, G, Hashem, Y. Deposit date: 2018-06-08 Release date: 2018-07-11 Last modified: 2018-08-08 Method: ELECTRON MICROSCOPY (4 Å) Cite: Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance. J. Mol. Biol., 430, 2018
6GQ1	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin) Descriptor: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... Authors: Pellegrino, S, Demeshkina, N, Mancera-Martinez, E, Melnikov, S, Simonetti, A, Myasnikov, A, Yusupov, M, Yusupova, G, Hashem, Y. Deposit date: 2018-06-07 Release date: 2018-07-11 Last modified: 2018-08-08 Method: ELECTRON MICROSCOPY (4.4 Å) Cite: Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance. J. Mol. Biol., 430, 2018
6GQB	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin) Descriptor: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... Authors: Pellegrino, S, Yusupov, M, Yusupova, G, Hashem, Y. Deposit date: 2018-06-07 Release date: 2018-07-11 Last modified: 2021-08-04 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance. J. Mol. Biol., 430, 2018
6FWW	GFP/KKK. A redesigned GFP with improved solubility Descriptor: Green fluorescent protein Authors: Varejao, N, Lascorz, J, Gil-Garcia, M, Diaz-Caballero, M, Navarro, S, Ventura, S, Reverter, D. Deposit date: 2018-03-07 Release date: 2018-08-01 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.131 Å) Cite: Combining Structural Aggregation Propensity and Stability Predictions To Redesign Protein Solubility. Mol. Pharm., 15, 2018
6FSQ	Structure of A3_bGFPD, an artificial bi-domain protein based on two different alphaRep domains : A3 and a GFP binding domain (bGFPD) Descriptor: MALONATE ION, SODIUM ION, alphaRep A3_bGFPD Authors: Li de la Sierra-Gallay, I, Leger, C. Deposit date: 2018-02-20 Release date: 2018-08-08 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.79 Å) Cite: Ligand-induced conformational switch in an artificial bidomain protein scaffold. Sci Rep, 9, 2019
6MB2	Cryo-EM structure of the PYD filament of AIM2 Descriptor: Green fluorescent protein, Interferon-inducible protein AIM2 Authors: Lu, A, Li, Y, Wu, H. Deposit date: 2018-08-29 Release date: 2018-09-05 Method: ELECTRON MICROSCOPY (5 Å) Cite: Plasticity in PYD assembly revealed by cryo-EM structure of the PYD filament of AIM2. Cell Discov, 1, 2015
6G7N	Trichodesmium Tery_3377 (IdiA) (FutA) with iron and alanine ligand. Descriptor: D-ALANINE, D-GLUTAMIC ACID, Extracellular solute-binding protein, ... Authors: Machelett, M.M, Tews, I. Deposit date: 2018-04-06 Release date: 2018-09-12 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.1 Å) Cite: Structural and functional characterization of IdiA/FutA (Tery_3377), an iron-binding protein from the ocean diazotrophTrichodesmium erythraeum. J. Biol. Chem., 293, 2018
6G7P	Trichodesmium Tery_3377 (IdiA) (FutA) with iron and water ligands. Descriptor: CHLORIDE ION, Extracellular solute-binding protein, family 1, ... Authors: Machelett, M.M, Tews, I. Deposit date: 2018-04-06 Release date: 2018-09-12 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Structural and functional characterization of IdiA/FutA (Tery_3377), an iron-binding protein from the ocean diazotrophTrichodesmium erythraeum. J. Biol. Chem., 293, 2018
5NI3	sfGFP 204-204 mutant dimer Descriptor: CHLORIDE ION, GLYCEROL, Green fluorescent protein, ... Authors: Worthy, H.L, Rizkallah, P.J. Deposit date: 2017-03-23 Release date: 2018-09-12 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.28 Å) Cite: Association of Fluorescent Protein Pairs and Its Significant Impact on Fluorescence and Energy Transfer Adv Sci, 2020
6G7Q	Trichodesmium Tery_3377 (IdiA) (FutA) in complex with iron and citrate ligands. Descriptor: CHLORIDE ION, CITRATE ANION, Extracellular solute-binding protein, ... Authors: Machelett, M.M, Tews, I. Deposit date: 2018-04-06 Release date: 2018-09-12 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Structural and functional characterization of IdiA/FutA (Tery_3377), an iron-binding protein from the ocean diazotrophTrichodesmium erythraeum. J. Biol. Chem., 293, 2018
5NHN	Super-Folder Green Fluorescent Protein Artificiall dimer linked via 148 position Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Green fluorescent protein, ... Authors: Worthy, H.L, Rizkallah, P.J. Deposit date: 2017-03-22 Release date: 2018-09-26 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.96 Å) Cite: Positive functional synergy of structurally integrated artificial protein dimers assembled by Click chemistry Commun Chem, 2019
6GV1	Crystal structure of E.coli Multidrug/H+ antiporter MdfA in outward open conformation with bound Fab fragment Descriptor: Fab fragment YN1074 heavy chain, Fab fragment YN1074 light chain, Major Facilitator Superfamily multidrug/H+ antiporter MdfA from E.coli, ... Authors: Nagarathinam, K, Parthier, C, Stubbs, M.T, Tanabe, M. Deposit date: 2018-06-20 Release date: 2018-10-03 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Outward open conformation of a Major Facilitator Superfamily multidrug/H+antiporter provides insights into switching mechanism. Nat Commun, 9, 2018
6FP7	mTFP1/DARPin 1238_E11 complex in space group P6522 Descriptor: DARPin1238_E11, GFP-like fluorescent chromoprotein cFP484, GLYCEROL Authors: Jakob, R.P, Vigano, M.A, Bieli, D, Matsuda, S, Schaefer, J.V, Pluckthun, A, Affolter, M, Maier, T. Deposit date: 2018-02-09 Release date: 2018-10-03 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.576 Å) Cite: DARPins recognizing mTFP1 as novel reagents forin vitroandin vivoprotein manipulations. Biol Open, 7, 2018

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