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5HYK
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BU of 5hyk by Molmil
Crystal structure of the complex PPARalpha/AL26-29
Descriptor: 2-methyl-2-[4-(naphthalen-1-yl)phenoxy]propanoic acid, Peroxisome proliferator-activated receptor alpha
Authors:Pochetti, G, Montanari, R, Capelli, D, Loiodice, F, Laghezza, A, Lavecchia, A.
Deposit date:2016-02-01
Release date:2016-11-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural basis for PPAR partial or full activation revealed by a novel ligand binding mode.
Sci Rep, 6, 2016
2JG9
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BU of 2jg9 by Molmil
Crystallographic structure of human C1q globular heads (P1)
Descriptor: CALCIUM ION, Complement C1q subcomponent subunit A, Complement C1q subcomponent subunit B, ...
Authors:Paidassi, H, Tacnet-Delorme, P, Garlatti, V, Darnault, C, Ghebrehiwet, B, Gaboriaud, C, Arlaud, G.J, Frachet, P.
Deposit date:2007-02-09
Release date:2008-02-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:C1Q Binds Phosphatidylserine and Likely Acts as a Multiligand-Bridging Molecule in Apoptotic Cell Recognition.
J.Immunol., 180, 2008
6O64
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Crystal Structure of Arabidopsis thaliana Spermidine Synthase isoform 2 (AtSPDS2)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Sekula, B, Dauter, Z.
Deposit date:2019-03-05
Release date:2019-06-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Spermidine Synthase (SPDS) Undergoes Concerted Structural Rearrangements Upon Ligand Binding - A Case Study of the Two SPDS Isoforms FromArabidopsis thaliana.
Front Plant Sci, 10, 2019
1WYX
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BU of 1wyx by Molmil
The Crystal Structure of the p130Cas SH3 Domain at 1.1 A Resolution
Descriptor: 1,2-ETHANEDIOL, CRK-associated substrate, MAGNESIUM ION
Authors:Wisniewska, M, Bossenmaier, B, Georges, G, Hesse, F, Dangl, M, Kuenkele, K.P, Ioannidis, I, Huber, R, Engh, R.A.
Deposit date:2005-02-17
Release date:2005-04-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:The 1.1 A resolution crystal structure of the p130cas SH3 domain and ramifications for ligand selectivity
J.Mol.Biol., 347, 2005
1DZ6
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BU of 1dz6 by Molmil
ferrous p450cam from pseudomonas putida
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, CYTOCHROME P450-CAM, ...
Authors:Schlichting, I, Berendzen, J, Chu, K, Stock, A.M, Maves, S.A, Benson, D.E, Sweet, R.M, Ringe, D, Petsko, G.A, Sligar, S.G.
Deposit date:2000-02-18
Release date:2000-03-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Catalytic Pathway of Cytochrome P450Cam at Atomic Resolution
Science, 287, 2000
2QBM
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BU of 2qbm by Molmil
Crystal structure of the P450cam G248T mutant in the cyanide bound state
Descriptor: CAMPHOR, CYANIDE ION, Cytochrome P450-cam, ...
Authors:von Koenig, K, Makris, T.M, Sligar, S.D, Schlichting, I.
Deposit date:2007-06-18
Release date:2007-12-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Alteration of P450 Distal Pocket Solvent Leads to Impaired Proton Delivery and Changes in Heme Geometry.
Biochemistry, 46, 2007
3QF9
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BU of 3qf9 by Molmil
Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and a furan-thiazolidinedione ligand
Descriptor: 6-{5-[(Z)-(2,4-dioxo-1,3-thiazolidin-5-ylidene)methyl]furan-2-yl}-N-{3-[(4-ethylpiperazin-1-yl)methyl]-5-(trifluoromethyl)phenyl}naphthalene-1-carboxamide, CHLORIDE ION, Proto-oncogene serine/threonine-protein kinase pim-1, ...
Authors:Filippakopoulos, P, Bullock, A.N, Fedorov, O, Miduturu, C.V, von Delft, F, Arrowsmith, C.H, Weigelt, J, Edwards, A, Bountra, C, Grey, N, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2011-01-21
Release date:2011-03-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and a furan-thiazolidinedione ligand
To be Published
6O63
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BU of 6o63 by Molmil
Crystal Structure of Arabidopsis thaliana Spermidine Synthase isoform 1 (AtSPDS1)
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ...
Authors:Sekula, B, Dauter, Z.
Deposit date:2019-03-05
Release date:2019-06-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Spermidine Synthase (SPDS) Undergoes Concerted Structural Rearrangements Upon Ligand Binding - A Case Study of the Two SPDS Isoforms FromArabidopsis thaliana.
Front Plant Sci, 10, 2019
2JG8
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BU of 2jg8 by Molmil
Crystallographic structure of human C1q globular heads complexed to phosphatidyl-serine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Complement C1q subcomponent subunit A, ...
Authors:Paidassi, H, Tacnet-Delorme, P, Garlatti, V, Darnault, C, Ghebrehiwet, B, Gaboriaud, C, Arlaud, G.J, Frachet, P.
Deposit date:2007-02-09
Release date:2008-02-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:C1Q Binds Phosphatidylserine and Likely Acts as a Multiligand-Bridging Molecule in Apoptotic Cell Recognition.
J.Immunol., 180, 2008
6A3W
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BU of 6a3w by Molmil
Complex structure of 4-1BB and utomilumab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Tumor necrosis factor receptor superfamily member 9, utomilumab VH, ...
Authors:Li, Y, Tan, S, Zhang, C, Chai, Y, Qi, J, Tien, P, Gao, S, Gao, G.F.
Deposit date:2018-06-17
Release date:2018-10-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Limited Cross-Linking of 4-1BB by 4-1BB Ligand and the Agonist Monoclonal Antibody Utomilumab.
Cell Rep, 25, 2018
5A6Q
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BU of 5a6q by Molmil
Native structure of the LecB lectin from Pseudomonas aeruginosa strain PA14
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, FUCOSE-BINDING LECTIN PA-IIL, ...
Authors:Sommer, R, Wagner, S, Varrot, A, Khaledi, A, Haussler, S, Imberty, A, Titz, A.
Deposit date:2015-06-30
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The virulence factor LecB varies in clinical isolates: consequences for ligand binding and drug discovery.
Chem Sci, 7, 2016
5A6Z
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BU of 5a6z by Molmil
Structure of the LecB lectin from Pseudomonas aeruginosa strain PA14 in complex with lewis a
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, LECB, ...
Authors:Sommer, R, Wagner, S, Varrot, A, Khaledi, A, Haussler, S, Imberty, A, Titz, A.
Deposit date:2015-07-02
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The virulence factor LecB varies in clinical isolates: consequences for ligand binding and drug discovery.
Chem Sci, 7, 2016
3SR2
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BU of 3sr2 by Molmil
Crystal Structure of Human XLF-XRCC4 Complex
Descriptor: DNA repair protein XRCC4, Non-homologous end-joining factor 1
Authors:Hammel, M, Classen, S, Tainer, J.A.
Deposit date:2011-07-06
Release date:2011-07-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.9708 Å)
Cite:XRCC4 Protein Interactions with XRCC4-like Factor (XLF) Create an Extended Grooved Scaffold for DNA Ligation and Double Strand Break Repair.
J.Biol.Chem., 286, 2011
3ERN
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BU of 3ern by Molmil
Crystal structure of 2C-methyl-D-erythritol 2,4-clycodiphosphate synthase complexed with AraCMP
Descriptor: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, CYTOSINE ARABINOSE-5'-PHOSPHATE, GERANYL DIPHOSPHATE, ...
Authors:Hunter, W.N, Ramsden, N.L, Kemp, L.A.
Deposit date:2008-10-02
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A structure-based approach to ligand discovery for 2C-methyl-D-erythritol-2,4-cyclodiphosphate synthase: a target for antimicrobial therapy
J.Med.Chem., 52, 2009
3VV6
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BU of 3vv6 by Molmil
Crystal Structure of beta secetase in complex with 2-amino-3-methyl-6-((1S, 2R)-2-phenylcyclopropyl)pyrimidin-4(3H)-one
Descriptor: 2-amino-3-methyl-6-[(1S,2R)-2-phenylcyclopropyl]pyrimidin-4(3H)-one, Beta-secretase 1, GLYCEROL, ...
Authors:Yonezawa, S, Yamamoto, T, Yamakawa, H, Muto, C, Hosono, M, Hattori, K, Higashino, K, Sakagami, M, Togame, H, Tanaka, Y, Nakano, T, Takemoto, H, Arisawa, M, Shuto, S.
Deposit date:2012-07-17
Release date:2012-10-24
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Conformational restriction approach to beta-secretase (BACE1) inhibitors: effect of a cyclopropane ring to induce an alternative binding mode
J.Med.Chem., 55, 2012
3I4Z
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BU of 3i4z by Molmil
Crystal structure of the dimethylallyl tryptophan synthase FgaPT2 from Aspergillus fumigatus
Descriptor: 1,3-BUTANEDIOL, GLYCEROL, Tryptophan dimethylallyltransferase
Authors:Schall, C, Zocher, G, Stehle, T.
Deposit date:2009-07-03
Release date:2009-09-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:The structure of dimethylallyl tryptophan synthase reveals a common architecture of aromatic prenyltransferases in fungi and bacteria
Proc.Natl.Acad.Sci.USA, 106, 2009
3P1F
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BU of 3p1f by Molmil
Crystal structure of the bromodomain of human CREBBP in complex with a hydroquinazolin ligand
Descriptor: 1,2-ETHANEDIOL, 3-methyl-3,4-dihydroquinazolin-2(1H)-one, CREB-binding protein, ...
Authors:Filippakopoulos, P, Picaud, S, Fedorov, O, Muniz, J, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2010-09-30
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure of the bromodomain of human CREBBP in complex with a hydroquinazolin ligand
To be Published
8EAZ
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BU of 8eaz by Molmil
HOIL-1/E2-Ub/Ub transthiolation complex
Descriptor: RanBP-type and C3HC4-type zinc finger-containing protein 1, Ubiquitin, Ubiquitin-conjugating enzyme E2 L3, ...
Authors:Wang, X.S, Cotton, T.R, Lechtenberg, B.C.
Deposit date:2022-08-30
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:The unifying catalytic mechanism of the RING-between-RING E3 ubiquitin ligase family.
Nat Commun, 14, 2023
6DGP
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BU of 6dgp by Molmil
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with TRAP220 Coactivator Peptide
Descriptor: Peroxisome proliferator-activated receptor gamma, TRAP220 Coactivator Peptide (Mediator of RNA polymerase II transcription subunit 1)
Authors:Shang, J, Kojetin, D.J.
Deposit date:2018-05-17
Release date:2019-05-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with TRAP220 Coactivator Peptide
To Be Published
3F46
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BU of 3f46 by Molmil
The Crystal Structure of C176A Mutated [Fe]-Hydrogenase (Hmd) Holoenzyme from Methanocaldococcus jannaschii
Descriptor: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, 5'-O-[(S)-hydroxy{[2-hydroxy-3,5-dimethyl-6-(2-oxoethyl)pyridin-4-yl]oxy}phosphoryl]guanosine, 5,10-methenyltetrahydromethanopterin hydrogenase, ...
Authors:Hiromoto, T, Vogt, S, Warkentin, E, Thauer, R.K, Shima, S, Ermler, U.
Deposit date:2008-10-31
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The crystal structure of C176A mutated [Fe]-hydrogenase suggests an acyl-iron ligation in the active site iron complex.
Febs Lett., 583, 2009
3F47
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BU of 3f47 by Molmil
The Crystal Structure of [Fe]-Hydrogenase (Hmd) Holoenzyme from Methanocaldococcus jannaschii
Descriptor: 5'-O-[(S)-hydroxy{[2-hydroxy-3,5-dimethyl-6-(2-oxoethyl)pyridin-4-yl]oxy}phosphoryl]guanosine, 5,10-methenyltetrahydromethanopterin hydrogenase, CARBON MONOXIDE, ...
Authors:Hiromoto, T, Pilak, O, Warkentin, E, Thauer, R.K, Shima, S, Ermler, U.
Deposit date:2008-10-31
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure of C176A mutated [Fe]-hydrogenase suggests an acyl-iron ligation in the active site iron complex.
Febs Lett., 583, 2009
5A6Y
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BU of 5a6y by Molmil
Structure of the LecB lectin from Pseudomonas aeruginosa strain PA14 in complex with mannose-alpha1,3mannoside
Descriptor: CALCIUM ION, FUCOSE-BINDING LECTIN PA-IIL, GLYCEROL, ...
Authors:Sommer, R, Wagner, S, Varrot, A, Khaledi, A, Haussler, S, Imberty, A, Titz, A.
Deposit date:2015-07-02
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The virulence factor LecB varies in clinical isolates: consequences for ligand binding and drug discovery.
Chem Sci, 7, 2016
7D85
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BU of 7d85 by Molmil
Crystal structure of anti-ErbB3 Fab ISU104 in complex with human ErbB3 extracellular domain 3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-ErbB3 Fab heavy chain, Anti-ErbB3 Fab light chain, ...
Authors:Yoo, Y, Cho, H.S.
Deposit date:2020-10-07
Release date:2021-04-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Novel Therapeutic Anti-ErbB3, ISU104 Exhibits Potent Antitumorigenic Activity by Inhibiting Ligand Binding and ErbB3 Heterodimerization.
Mol.Cancer Ther., 20, 2021
5A6X
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BU of 5a6x by Molmil
Structure of the LecB lectin from Pseudomonas aeruginosa strain PA14 in complex with alpha-methyl-fucoside
Descriptor: CALCIUM ION, FUCOSE-BINDING LECTIN PA-IIL, methyl alpha-L-fucopyranoside
Authors:Sommer, R, Wagner, S, Varrot, A, Khaledi, A, Haussler, S, Imberty, A, Titz, A.
Deposit date:2015-07-02
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The virulence factor LecB varies in clinical isolates: consequences for ligand binding and drug discovery.
Chem Sci, 7, 2016
6O65
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BU of 6o65 by Molmil
Crystal Structure of Arabidopsis thaliana Spermidine Synthase isoform 1 (AtSPDS1) in complex with decarboxylated S-adenosylmethionine and cyclohexylamine
Descriptor: 1,2-ETHANEDIOL, 5'-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5'-DEOXYADENOSINE, CYCLOHEXYLAMMONIUM ION, ...
Authors:Sekula, B, Dauter, Z.
Deposit date:2019-03-05
Release date:2019-06-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Spermidine Synthase (SPDS) Undergoes Concerted Structural Rearrangements Upon Ligand Binding - A Case Study of the Two SPDS Isoforms FromArabidopsis thaliana.
Front Plant Sci, 10, 2019

238582

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