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7DRR
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BU of 7drr by Molmil
Structure of SspE-R100A protein
Descriptor: SspE protein
Authors:Haiyan, G, Jinchuan, Z, Chen, S, Wang, L, Wu, G.
Deposit date:2020-12-29
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Nicking mechanism underlying the DNA phosphorothioate-sensing antiphage defense by SspE.
Nat Commun, 13, 2022
8SJP
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BU of 8sjp by Molmil
[3T15] Self-assembling DNA motif with 15 base pairs between junctions and P32 symmetry
Descriptor: DNA (5'-D(*CP*AP*GP*CP*TP*GP*AP*CP*CP*TP*GP*AP*CP*TP*CP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*TP*CP*CP*TP*GP*TP*GP*GP*TP*CP*AP*GP*C)-3'), DNA (5'-D(P*CP*GP*AP*TP*GP*GP*AP*CP*AP*GP*GP*GP*G)-3'), ...
Authors:Vecchioni, S, Janowski, J, Sha, R, Ohayon, Y.P.
Deposit date:2023-04-18
Release date:2024-04-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (5.22 Å)
Cite:Engineering tertiary chirality in helical biopolymers.
Proc.Natl.Acad.Sci.USA, 121, 2024
6JXD
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BU of 6jxd by Molmil
Human nucleosome core particle with cohesive end DNA termini
Descriptor: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:DeFalco, L, Davey, C.A.
Deposit date:2019-04-23
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:PARP1 exhibits enhanced association and catalytic efficiency with gamma H2A.X-nucleosome.
Nat Commun, 10, 2019
8SZ5
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BU of 8sz5 by Molmil
[2T5] Self-assembling DNA motif with 5 base pairs between junctions and P32 symmetry
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*TP*G)-3'), DNA (5'-D(P*AP*CP*GP*AP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(P*CP*AP*CP*GP*T)-3'), ...
Authors:Vecchioni, S, Janowski, J, Sha, R, Ohayon, Y.P.
Deposit date:2023-05-26
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Engineering tertiary chirality in helical biopolymers.
Proc.Natl.Acad.Sci.USA, 121, 2024
6A5K
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BU of 6a5k by Molmil
Crystal structure of Arabidopsis thaliana SUVH6 in complex with SAM, form 1
Descriptor: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6, S-ADENOSYLMETHIONINE, ...
Authors:Li, X, Du, J.
Deposit date:2018-06-24
Release date:2018-08-29
Last modified:2018-09-26
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8DYK
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BU of 8dyk by Molmil
Room temperature neutron structure of a fluorescent Ag8 cluster templated by a multistranded DNA scaffold
Descriptor: DNA (5'-D(*AP*AP*CP*CP*CP*C)-3'), SILVER ION
Authors:Meilleur, F, Lieberman, R.L, Petty, J.T.
Deposit date:2022-08-04
Release date:2023-08-02
Last modified:2024-05-22
Method:NEUTRON DIFFRACTION (2.1 Å)
Cite:Mapping H + in the Nanoscale (A 2 C 4 ) 2 -Ag 8 Fluorophore.
J Phys Chem Lett, 13, 2022
8X4F
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BU of 8x4f by Molmil
Solution NMR structure of a DNA hairpin formed by pure CTG repeats
Descriptor: DNA (5'-D(*GP*CP*TP*GP*CP*TP*GP*CP*TP*GP*CP*TP*GP*C)-3'), SODIUM ION
Authors:Guo, P, Wan, L, Han, D.
Deposit date:2023-11-15
Release date:2024-02-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:High-Resolution NMR Structures of Intrastrand Hairpins Formed by CTG Trinucleotide Repeats.
Acs Chem Neurosci, 15, 2024
1BCE
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BU of 1bce by Molmil
INTRAMOLECULAR TRIPLEX, NMR, 10 STRUCTURES
Descriptor: DNA (5'-D(*AP*AP*GP*GP*AP*A)-3'), DNA (5'-D(*TP*TP*CP*CP*TP*T)-3')
Authors:Asensio, J.L, Brown, T, Lane, A.N.
Deposit date:1998-04-29
Release date:1998-08-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Comparison of the solution structures of intramolecular DNA triple helices containing adjacent and non-adjacent CG.C+ triplets.
Nucleic Acids Res., 26, 1998
1BCB
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BU of 1bcb by Molmil
INTRAMOLECULAR TRIPLEX, NMR, 10 STRUCTURES
Descriptor: DNA (5'-D(*AP*GP*AP*AP*GP*A)-3'), DNA (5'-D(*TP*CP*TP*TP*CP*T)-3')
Authors:Asensio, J.L, Brown, T, Lane, A.N.
Deposit date:1998-04-29
Release date:1998-08-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Comparison of the solution structures of intramolecular DNA triple helices containing adjacent and non-adjacent CG.C+ triplets.
Nucleic Acids Res., 26, 1998
7Y0D
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BU of 7y0d by Molmil
Cryo-EM structure of the Mycobacterium smegmatis DNA integrity scanning protein (MsDisA).
Descriptor: DNA integrity scanning protein DisA
Authors:Gautam, S, Vinothkumar, K.R, Chatterji, D.
Deposit date:2022-06-04
Release date:2023-02-08
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Regulatory mechanisms of c-di-AMP synthase (MsDisA) protein from Mycobacterium smegmatis revealed by a structure - function analysis.
Protein Sci., 32, 2023
6A5M
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BU of 6a5m by Molmil
Crystal structure of Arabidopsis thaliana SUVH6 in complex with SAM, form 2
Descriptor: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6, S-ADENOSYLMETHIONINE, ...
Authors:Li, X, Du, J.
Deposit date:2018-06-24
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Mechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8RW2
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BU of 8rw2 by Molmil
Structure of a chair-type antiparallel quadruplex-duplex hybrid at pH 6
Descriptor: DNA (33-MER)
Authors:Vianney, Y.M, Weisz, K.
Deposit date:2024-02-02
Release date:2024-03-27
Last modified:2024-06-05
Method:SOLUTION NMR
Cite:A pH-Responsive Topological Switch Based on a DNA Quadruplex-Duplex Hybrid.
Chemistry, 30, 2024
7W0X
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BU of 7w0x by Molmil
Tetrameric antiparallel G-quadruplex formed by natural human telomeric sequence
Descriptor: DNA (5'-D(*GP*GP*GP*TP*TP*A)-3')
Authors:Jing, H.T, Fu, W.Q.
Deposit date:2021-11-18
Release date:2022-01-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure of an alternating antiparallel tetrameric G-quadruplex assembled by the single-repeat of human telomeric DNA d(GGGTTA)
To Be Published
8S1W
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BU of 8s1w by Molmil
Structure of a quadruplex-duplex hybrid with a (-pd+l) loop progression
Descriptor: DNA (33-MER)
Authors:Vianney, Y.M, Jana, J, Weisz, K.
Deposit date:2024-02-16
Release date:2024-03-27
Last modified:2024-06-05
Method:SOLUTION NMR
Cite:A pH-Responsive Topological Switch Based on a DNA Quadruplex-Duplex Hybrid.
Chemistry, 30, 2024
6X5D
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BU of 6x5d by Molmil
Structure of Dickerson-Drew Dodecamer with 2'-MeSe-ara-T modification
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*(UWJ)P*CP*GP*CP*G)-3'), MAGNESIUM ION
Authors:Chen, C, Fang, Z, Huang, Z.
Deposit date:2020-05-25
Release date:2021-06-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:2'-Beta-Selenium Atom on Thymidine to Control Beta-Form DNA Conformation and Large Crystal Formation
Cryst.Growth Des., 22, 2022
6HP7
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BU of 6hp7 by Molmil
ARBITRIUM PEPTIDE RECEPTOR FROM SPBETA PHAGE in complex with 43 mer DNA
Descriptor: DNA (43-MER), PHOSPHATE ION, SPBc2 prophage-derived uncharacterized protein YopK
Authors:Marina, A, Gallego del Sol, F.
Deposit date:2018-09-19
Release date:2019-02-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Deciphering the Molecular Mechanism Underpinning Phage Arbitrium Communication Systems.
Mol.Cell, 74, 2019
156D
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BU of 156d by Molmil
REFINED SOLUTION STRUCTURE OF THE DIMERIC QUADRUPLEX FORMED FROM THE OXYTRICHA TELOMERIC OLIGONUCLEOTIDE D(GGGGTTTTGGGG)
Descriptor: DNA (5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3')
Authors:Schultze, P, Smith, F.W, Feigon, J.
Deposit date:1994-01-17
Release date:1994-04-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Refined solution structure of the dimeric quadruplex formed from the Oxytricha telomeric oligonucleotide d(GGGGTTTTGGGG).
Structure, 2, 1994
8X1Z
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BU of 8x1z by Molmil
HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y:DNA:E-CFCP-TP ternary complex
Descriptor: DNA/RNA (38-MER), E-CFCP-triphosphate, GLYCEROL, ...
Authors:Yasutake, Y, Hattori, S.I, Mitsuya, H.
Deposit date:2023-11-09
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Deviated binding of anti-HBV nucleoside analog E-CFCP-TP to the reverse transcriptase active site attenuates the effect of drug-resistant mutations.
Sci Rep, 14, 2024
8X21
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BU of 8x21 by Molmil
HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/L74V:DNA:ETV-TP ternary complex
Descriptor: DNA/RNA (38-MER), GLYCEROL, HIV-1 RT p51 subunit, ...
Authors:Yasutake, Y, Hattori, S.I, Mitsuya, H.
Deposit date:2023-11-09
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Deviated binding of anti-HBV nucleoside analog E-CFCP-TP to the reverse transcriptase active site attenuates the effect of drug-resistant mutations.
Sci Rep, 14, 2024
8X20
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BU of 8x20 by Molmil
HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/L74V:DNA:E-CFCP-TP ternary complex
Descriptor: DNA/RNA (38-MER), E-CFCP-triphosphate, GLYCEROL, ...
Authors:Yasutake, Y, Hattori, S.I, Mitsuya, H.
Deposit date:2023-11-09
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Deviated binding of anti-HBV nucleoside analog E-CFCP-TP to the reverse transcriptase active site attenuates the effect of drug-resistant mutations.
Sci Rep, 14, 2024
3GZ6
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BU of 3gz6 by Molmil
Crystal structure of Shewanella oneidensis NrtR complexed with a 27mer DNA
Descriptor: DNA (27-MER), MutT/nudix family protein, SODIUM ION
Authors:Huang, N, Zhang, H.
Deposit date:2009-04-06
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Structure and function of an ADP-ribose-dependent transcriptional regulator of NAD metabolism
Structure, 17, 2009
1JYH
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BU of 1jyh by Molmil
Crystal Structure of the Escherichia coli SbmC protein (AKA Gyrase Inhibitory Protein GyrI, AKA YeeB)
Descriptor: DNA Gyrase inhibitory protein
Authors:Romanowski, M.J, Gibney, S.A, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2001-09-12
Release date:2002-04-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the Escherichia coli SbmC protein that protects cells from the DNA replication inhibitor microcin B17.
Proteins, 47, 2002
1B3P
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BU of 1b3p by Molmil
5'-D(*GP*GP*AP*GP*GP*AP*T)-3'
Descriptor: DNA (5'-D(*GP*GP*AP*GP*GP*AP*T)-3')
Authors:Kettani, A, Bouaziz, S, Skripkin, E, Majumdar, A, Wang, W, Jones, R.A, Patel, D.J.
Deposit date:1998-12-14
Release date:1999-08-31
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Interlocked mismatch-aligned arrowhead DNA motifs.
Structure Fold.Des., 7, 1999
2MS9
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BU of 2ms9 by Molmil
Solution structure of a G-quadruplex
Descriptor: DNA (28-MER)
Authors:Chung, W.J, Heddi, B, Schmitt, E, Lim, K.W, Mechulam, Y, Phan, A.T.
Deposit date:2014-07-25
Release date:2015-02-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of a left-handed DNA G-quadruplex
Proc.Natl.Acad.Sci.USA, 2015
7DPE
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BU of 7dpe by Molmil
RNA methyltransferase METTL4
Descriptor: DNA (5'-D(*GP*CP*CP*GP*CP*GP*TP*GP*AP*TP*CP*AP*CP*GP*CP*GP*GP*C)-3'), GLYCEROL, Methyltransferase-like protein 2, ...
Authors:Luo, Q, Ma, J.B.
Deposit date:2020-12-18
Release date:2021-12-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.751 Å)
Cite:Structure of RNA m6A methyltransferase METTL4 in complex with DNA at 2.75 Angstroms resolutioon
To Be Published

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