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4CA9
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BU of 4ca9 by Molmil
Structure of the Nucleoplasmin-like N-terminal domain of Drosophila FKBP39
Descriptor: 39 KDA FK506-BINDING NUCLEAR PROTEIN
Authors:Artero, J, Forsyth, T, Callow, P, Watson, A.A, Zhang, W, Laue, E.D, Edlich-Muth, C, Przewloka, M.
Deposit date:2013-10-07
Release date:2014-10-29
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The Pentameric Nucleoplasmin Fold is Present in Drosophila Fkbp39 and a Large Number of Chromatin-Related Proteins.
J.Mol.Biol., 427, 2015
8IF5
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BU of 8if5 by Molmil
AFB1-AF26 APTAMER COMPLEX
Descriptor: AFB1 DNA aptamer (26-MER), AFLATOXIN B1
Authors:Xu, G.H, Wang, C, Li, C.G.
Deposit date:2023-02-17
Release date:2023-07-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for high-affinity recognition of aflatoxin B1 by a DNA aptamer.
Nucleic Acids Res., 51, 2023
3F2E
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BU of 3f2e by Molmil
Crystal structure of Yellowstone SIRV coat protein C-terminus
Descriptor: CITRIC ACID, SIRV coat protein
Authors:Taurog, R.E, Szymczyna, B.R, Williamson, J.R, Johnson, J.E.
Deposit date:2008-10-29
Release date:2009-04-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.668 Å)
Cite:Synergy of NMR, computation, and X-ray crystallography for structural biology.
Structure, 17, 2009
5HAW
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BU of 5haw by Molmil
structures of the NO factor SlmA bound to DNA and the cytoskeletal cell division protein FtsZ
Descriptor: DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*C)-3'), FtsZ CTT, Nucleoid occlusion factor SlmA
Authors:Schumacher, M.A, Zeng, W.
Deposit date:2015-12-31
Release date:2016-04-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structures of the nucleoid occlusion protein SlmA bound to DNA and the C-terminal domain of the cytoskeletal protein FtsZ.
Proc.Natl.Acad.Sci.USA, 113, 2016
5HBY
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BU of 5hby by Molmil
RNA primer-template complex with 2-methylimidazole-activated monomer analogue-3 binding sites
Descriptor: MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*C)-3'), [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-(3-methyl-1~{H}-pyrazol-4-yl)phosphinic acid
Authors:Zhang, W, Tam, C.P, Wang, J, Szostak, J.W.
Deposit date:2016-01-03
Release date:2016-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Unusual Base-Pairing Interactions in Monomer-Template Complexes.
ACS Cent Sci, 2, 2016
6A28
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BU of 6a28 by Molmil
Crystal structure of PprA W183R mutant form 2
Descriptor: DNA repair protein PprA, SULFATE ION
Authors:Adachi, M, Shibazaki, C, Shimizu, R, Arai, S, Satoh, K, Narumi, I, Kuroki, R.
Deposit date:2018-06-09
Release date:2018-12-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.193 Å)
Cite:Extended structure of pleiotropic DNA repair-promoting protein PprA from Deinococcus radiodurans.
FASEB J., 33, 2019
6EC0
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BU of 6ec0 by Molmil
Crystal structure of the wild-type heterocomplex between coil 1B domains of human intermediate filament proteins keratin 1 (KRT1) and keratin 10 (KRT10)
Descriptor: CADMIUM ION, COBALT (II) ION, Keratin 1, ...
Authors:Eldirany, S.A, Lomakin, I.B, Bunick, C.G.
Deposit date:2018-08-07
Release date:2019-05-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.983 Å)
Cite:Human keratin 1/10-1B tetramer structures reveal a knob-pocket mechanism in intermediate filament assembly.
Embo J., 38, 2019
4OI0
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BU of 4oi0 by Molmil
bound to ssRNA dinucleotide GC, ADP, AlF4-, and Mg2+(transition state, data set I)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NONAETHYLENE GLYCOL, ...
Authors:Dikfidan, A, Loll, B, Zeymer, C, Clausen, T, Meinhart, A.
Deposit date:2014-01-18
Release date:2014-05-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:RNA specificity and regulation of catalysis in the eukaryotic polynucleotide kinase clp1.
Mol.Cell, 54, 2014
8QJG
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BU of 8qjg by Molmil
Crystal structure of cytochrome domain 2 from PgcA
Descriptor: 1,2-ETHANEDIOL, HEME C, Lipoprotein cytochrome c, ...
Authors:Nash, B.W, Edwards, M.J, Clarke, T.A.
Deposit date:2023-09-13
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Tethered heme domains in a triheme cytochrome allow for increased electron transport distances.
Protein Sci., 33, 2024
8EKY
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BU of 8eky by Molmil
Cryo-EM structure of the human PRDX4-ErP46 complex
Descriptor: Peroxiredoxin-4, Thioredoxin domain-containing protein 5
Authors:Su, C.C.
Deposit date:2022-09-22
Release date:2023-05-03
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:High-resolution structural-omics of human liver enzymes.
Cell Rep, 42, 2023
6NKX
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BU of 6nkx by Molmil
Ternary complex crystal structure of K289M variant of DNA polymerase Beta with "hot-spot sequence" with dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*AP*CP*AP*AP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Batra, V.K, Wilson, S.H.
Deposit date:2019-01-07
Release date:2020-01-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Revealing an Internal Stabilization Deficiency in the DNA Polymerase beta K289M Cancer Variant through the Combined Use of Chemical Biology and X-ray Crystallography.
Biochemistry, 59, 2020
1NZ5
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BU of 1nz5 by Molmil
The Horse heart myoglobin variant K45E/K63E complexed with Manganese
Descriptor: MANGANESE (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hunter, C.L, Maurus, R, Mauk, M.R, Lee, H, Raven, E.L, Tong, H, Nguyen, N, Smith, S, Brayer, G.D, Mauk, A.G.
Deposit date:2003-02-15
Release date:2003-04-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Introduction and characterization of a functionally linked metal ion binding site at the exposed heme edge of myoglobin
Proc.Natl.Acad.Sci.USA, 100, 2003
5MGX
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BU of 5mgx by Molmil
The structure of FKBP38 in complex with the MEEVD tetratricopeptide binding-motif of Hsp90
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP8, yeast HSP90 C-terminus
Authors:Roe, S.M, Blundell, K.L, Prodromou, C.
Deposit date:2016-11-22
Release date:2017-03-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:The structure of FKBP38 in complex with the MEEVD tetratricopeptide binding-motif of Hsp90.
PLoS ONE, 12, 2017
8EKW
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BU of 8ekw by Molmil
Cryo-EM structure of human PRDX4
Descriptor: Peroxiredoxin-4
Authors:Su, C.C.
Deposit date:2022-09-22
Release date:2023-05-03
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:High-resolution structural-omics of human liver enzymes.
Cell Rep, 42, 2023
4GKL
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BU of 4gkl by Molmil
Crystal structure of a noncanonic maltogenic alpha-amylase AmyB from Thermotoga neapolitana
Descriptor: Alpha-amylase
Authors:Ha, N.C, Jun, S.Y, Kim, J.S.
Deposit date:2012-08-13
Release date:2013-02-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a novel alpha-amylase AmyB from Thermotoga neapolitana that produces maltose from the nonreducing end of polysaccharides
Acta Crystallogr.,Sect.D, 69, 2013
6B2X
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BU of 6b2x by Molmil
Apo YiuA Crystal Form 1
Descriptor: CHLORIDE ION, SODIUM ION, Solute-binding periplasmic protein of iron/siderophore ABC transporter
Authors:Radka, C.D, DeLucas, L.J, Aller, S.G.
Deposit date:2017-09-20
Release date:2017-11-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:The crystal structure of the Yersinia pestis iron chaperone YiuA reveals a basic triad binding motif for the chelated metal.
Acta Crystallogr D Struct Biol, 73, 2017
7T5H
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BU of 7t5h by Molmil
Structure of rabies virus phosphoprotein C-terminal domain, wild type
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, Phosphoprotein, ...
Authors:Zhan, J, Metcalfe, R.D, Gooley, P.R, Griffin, M.D.W.
Deposit date:2021-12-12
Release date:2022-04-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular Basis of Functional Effects of Phosphorylation of the C-Terminal Domain of the Rabies Virus P Protein.
J.Virol., 96, 2022
6NKR
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BU of 6nkr by Molmil
Ternary complex crystal structure of K289M variant of DNA polymerase Beta with dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Batra, V.K, Wilson, S.H.
Deposit date:2019-01-07
Release date:2020-01-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Revealing an Internal Stabilization Deficiency in the DNA Polymerase beta K289M Cancer Variant through the Combined Use of Chemical Biology and X-ray Crystallography.
Biochemistry, 59, 2020
6NKU
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BU of 6nku by Molmil
Ternary complex crystal structure of DNA polymerase Beta with "hot-spot sequence" with dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*AP*CP*AP*AP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Batra, V.K, Wilson, S.H.
Deposit date:2019-01-07
Release date:2020-01-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Revealing an Internal Stabilization Deficiency in the DNA Polymerase beta K289M Cancer Variant through the Combined Use of Chemical Biology and X-ray Crystallography.
Biochemistry, 59, 2020
6BVV
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BU of 6bvv by Molmil
Nipah virus W protein C-terminus in complex with Importin alpha 3
Descriptor: Importin subunit alpha-3, Protein W
Authors:Smith, K.M, Tsimbalyuk, S, Edwards, M.R, Aragao, D, Cross, E.M, Basler, C.F, Forwood, J.K.
Deposit date:2017-12-13
Release date:2018-07-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for importin alpha 3 specificity of W proteins in Hendra and Nipah viruses.
Nat Commun, 9, 2018
4YRW
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BU of 4yrw by Molmil
rat xanthine oxidoreductase, C-terminal deletion protein variant
Descriptor: BICARBONATE ION, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Okamoto, K.
Deposit date:2015-03-16
Release date:2015-04-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The C-terminal peptide plays a role in the formation of an intermediate form during the transition between xanthine dehydrogenase and xanthine oxidase
Febs J., 282, 2015
1OAG
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BU of 1oag by Molmil
Ascorbate peroxidase from soybean cytosol
Descriptor: ASCORBATE PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Sharp, K.H, Raven, E.L, Moody, P.C.E.
Deposit date:2003-01-13
Release date:2003-03-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of the Ascorbate Peroxidase-Ascorbate Complex
Nat.Struct.Biol., 10, 2003
1BI4
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BU of 1bi4 by Molmil
CATALYTIC DOMAIN OF HIV-1 INTEGRASE
Descriptor: INTEGRASE
Authors:Maignan, S, Guilloteau, J.P, Zhou-Liu, Q, Clement-Mella, C, Mikol, V.
Deposit date:1998-06-22
Release date:1998-11-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of the catalytic domain of HIV-1 integrase free and complexed with its metal cofactor: high level of similarity of the active site with other viral integrases.
J.Mol.Biol., 282, 1998
5IVL
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BU of 5ivl by Molmil
CshA Helicase
Descriptor: DEAD-box ATP-dependent RNA helicase CshA, SULFATE ION
Authors:Huen, J, Lin, C.-L, Yi, W.-L, Li, C.-L, Yuan, H.
Deposit date:2016-03-21
Release date:2017-03-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights into a Unique Dimeric DEAD-Box Helicase CshA that Promotes RNA Decay.
Structure, 25, 2017
5IW3
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BU of 5iw3 by Molmil
anti-CD20 monoclonal antibody Fc fragment
Descriptor: ACETATE ION, Ig gamma-1 chain C region, SULFATE ION, ...
Authors:Tang, C, Chen, Z.
Deposit date:2016-03-21
Release date:2017-03-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of anti-CD20 monoclonal antibody Fc fragment at 2.05 Angstroms resolution
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