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1JG3	Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with adenosine & VYP(ISP)HA substrate Descriptor: ADENOSINE, CHLORIDE ION, SODIUM ION, ... Authors: Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O. Deposit date: 2001-06-22 Release date: 2001-11-16 Last modified: 2011-07-27 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate. J.Mol.Biol., 313, 2001
1TEV	Crystal structure of the human UMP/CMP kinase in open conformation Descriptor: SULFATE ION, UMP-CMP kinase Authors: Segura-Pena, D, Sekulic, N, Ort, S, Konrad, M, Lavie, A. Deposit date: 2004-05-25 Release date: 2004-06-22 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Substrate-induced Conformational Changes in Human UMP/CMP Kinase. J.Biol.Chem., 279, 2004
4JLA	Crystal Structure of Adenylate kinase with 2 ADP's in the active site Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase Authors: Cho, Y.-J, Kern, D. Deposit date: 2013-03-12 Release date: 2014-06-25 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.12 Å) Cite: The energy landscape of adenylate kinase during catalysis. Nat.Struct.Mol.Biol., 22, 2015
8C7I	Crystal structure of the PS2 assembly factor Psb32 from the cyanobactium Thermosyncechococcus vestitus (formerly elongatus) Descriptor: Green fluorescent protein,Tll0404 protein Authors: Liauw, P, Gasper, R, Nowaczyk, M.M, Hofmann, E. Deposit date: 2023-01-16 Release date: 2024-01-31 Method: X-RAY DIFFRACTION (2.12 Å) Cite: Cryo-EM analysis of a novel photosystem II assembly intermediate that binds Psb32 To Be Published
5Y03	Galectin-13/Placental Protein 13 variant R53H crystal structure Descriptor: Galactoside-binding soluble lectin 13 Authors: Wang, Y, Su, J. Deposit date: 2017-07-14 Release date: 2018-01-31 Method: X-RAY DIFFRACTION (2.12 Å) Cite: Galectin-13, a different prototype galectin, does not bind beta-galacto-sides and forms dimers via intermolecular disulfide bridges between Cys-136 and Cys-138. Sci Rep, 8, 2018
7A8C	rsGreen0.7-K206A-F145S in the green-off state Descriptor: Green fluorescent protein, TRIETHYLENE GLYCOL Authors: De Zitter, E, Dedecker, P, Van Meervelt, L. Deposit date: 2020-08-30 Release date: 2021-02-17 Last modified: 2021-05-05 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*. Angew.Chem.Int.Ed.Engl., 60, 2021
1EMB	GREEN FLUORESCENT PROTEIN (GFP) FROM AEQUOREA VICTORIA, GLN 80 REPLACED WITH ARG Descriptor: GREEN FLUORESCENT PROTEIN Authors: Brejc, K, Sixma, T. Deposit date: 1997-01-08 Release date: 1997-06-16 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Structural basis for dual excitation and photoisomerization of the Aequorea victoria green fluorescent protein. Proc.Natl.Acad.Sci.USA, 94, 1997
1UKY	SUBSTRATE SPECIFICITY AND ASSEMBLY OF CATALYTIC CENTER DERIVED FROM TWO STRUCTURES OF LIGATED URIDYLATE KINASE Descriptor: ADENOSINE-5'-DIPHOSPHATE, URIDYLATE KINASE Authors: Mueller-Dieckmann, H.-J, Schulz, G.E. Deposit date: 1994-07-13 Release date: 1995-01-26 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Substrate specificity and assembly of the catalytic center derived from two structures of ligated uridylate kinase. J.Mol.Biol., 246, 1995
2PLK	Crystal structure of lysine/ornithine decarboxylase complexed with cadaverine from Vibrio vulnificus Descriptor: (4-{(E)-[(5-AMINOPENTYL)IMINO]METHYL}-5-HYDROXY-6-METHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, lysine/ornithine decarboxylase Authors: Lee, J, Goldsmith, E.J, Phillips, M.A. Deposit date: 2007-04-19 Release date: 2007-07-10 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.14 Å) Cite: Phylogenetic diversity and the structural basis of substrate specificity in the beta/alpha-barrel fold basic amino acid decarboxylases. J.Biol.Chem., 282, 2007
1F09	CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q WITH TWO BOUND IODIDES Descriptor: GREEN FLUORESCENT PROTEIN, IODIDE ION Authors: Wachter, R.M, Yarbrough, D, Kallio, K, Remington, S.J. Deposit date: 2000-05-15 Release date: 2000-11-17 Last modified: 2021-11-03 Method: X-RAY DIFFRACTION (2.14 Å) Cite: Crystallographic and energetic analysis of binding of selected anions to the yellow variants of green fluorescent protein. J.Mol.Biol., 301, 2000
5BTT	Switching GFP fluorescence using genetically encoded phenyl azide chemistry through two different non-native post-translational modifications routes at the same position. Descriptor: GLYCEROL, Green fluorescent protein, SULFATE ION Authors: Hartley, A.M, Worthy, H.L, Reddington, S.C, Rizkallah, P.J, Jones, D.D. Deposit date: 2015-06-03 Release date: 2016-07-13 Last modified: 2017-05-10 Method: X-RAY DIFFRACTION (2.14 Å) Cite: Molecular basis for functional switching of GFP by two disparate non-native post-translational modifications of a phenyl azide reaction handle. Chem Sci, 7, 2016
7BZB	Crystal structure of plant sesterterpene synthase AtTPS18 Descriptor: MAGNESIUM ION, PYROPHOSPHATE, Terpenoid synthase 18 Authors: Li, J.X, Wang, G.D, Zhang, P. Deposit date: 2020-04-27 Release date: 2020-09-23 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.148 Å) Cite: Molecular Basis for Sesterterpene Diversity Produced by Plant Terpene Synthases. Plant Commun., 1, 2020
7A7U	rsGreen1 in the green-on state Descriptor: Green fluorescent protein Authors: De Zitter, E, Dedecker, P, Van Meervelt, L. Deposit date: 2020-08-30 Release date: 2021-02-17 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*. Angew.Chem.Int.Ed.Engl., 60, 2021
7R4X	Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Pellegrino, S, Dent, K.C, Spikes, T, Warren, A.J. Deposit date: 2022-02-09 Release date: 2023-02-22 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.15 Å) Cite: Cryo-EM reconstruction of the human 40S ribosomal subunit at 2.15 angstrom resolution. Nucleic Acids Res., 51, 2023
3K1K	Green fluorescent protein bound to enhancer nanobody Descriptor: Enhancer, Green Fluorescent Protein Authors: Kirchhofer, A, Helma, J, Schmidthals, K, Frauer, C, Cui, S, Karcher, A, Pellis, M, Muyldermans, S, Delucci, C.C, Cardoso, M.C, Leonhardt, H, Hopfner, K.-P, Rothbauer, U. Deposit date: 2009-09-28 Release date: 2009-12-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Modulation of protein properties in living cells using nanobodies Nat.Struct.Mol.Biol., 17, 2010
4Z4M	Crystal structure of GFP-TAX1BP1 UBZ2 domain fusion protein Descriptor: Green fluorescent protein,Tax1-binding protein 1, ZINC ION Authors: Rohaim, A, Kawasaki, M, Wakatsuki, S. Deposit date: 2015-04-02 Release date: 2016-04-06 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.15 Å) Cite: A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1. Febs J., 283, 2016
8FFA	Crystal structure of Apo Dps protein (PA0962) from Pseudomonas aeruginosa (cubic form) Descriptor: Probable dna-binding stress protein Authors: Lovell, S, Kashipathy, M.M, Battaile, K.P, Rivera, M. Deposit date: 2022-12-08 Release date: 2023-03-08 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Pseudomonas aeruginosa Dps (PA0962) Functions in H 2 O 2 Mediated Oxidative Stress Defense and Exhibits In Vitro DNA Cleaving Activity. Int J Mol Sci, 24, 2023
8DHY	N-terminal fragment of MsbA fused to GFP in complex with copper(II) Descriptor: COPPER (II) ION, Fusion protein of MsbA N-terminal fragment and GFP,Green fluorescent protein Authors: Schrecke, S.R, Zhang, T, Lyu, J, Laganowsky, A. Deposit date: 2022-06-28 Release date: 2022-12-07 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structural basis for lipid and copper regulation of the ABC transporter MsbA. Nat Commun, 13, 2022
1SZR	A Dimer interface mutant of ornithine decarboxylase reveals structure of gem diamine intermediate Descriptor: N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], N~2~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-ORNITHINE, Ornithine decarboxylase, ... Authors: Jackson, L.K, Baldwin, J, Goldsmith, E.J, Phillips, M.A. Deposit date: 2004-04-06 Release date: 2004-10-26 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Multiple active site conformations revealed by distant site mutation in ornithine decarboxylase Biochemistry, 43, 2004
2AR7	Crystal structure of human adenylate kinase 4, AK4 Descriptor: Adenylate kinase 4 Authors: Filippakopoulos, P, Turnbull, A.P, Fedorov, O, Weigelt, J, Bunkoczi, G, Ugochukwu, E, Debreczeni, J, Niesen, F, von Delft, F, Edwards, A, Arrowsmith, C, Sundstrom, M, Structural Genomics Consortium (SGC) Deposit date: 2005-08-19 Release date: 2005-12-06 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Crystal structure of human adenylate kinase 4, AK4 To be Published
4KZD	Crystal structure of an RNA aptamer in complex with fluorophore and Fab Descriptor: 4-(3,5-difluoro-4-hydroxybenzyl)-1,2-dimethyl-1H-imidazol-5-ol, BL3-6 Fab antibody, heavy chain, ... Authors: Huang, H, Suslov, N.B, Li, N, Koldobskaya, Y, Rice, P.A, Piccirilli, J.A. Deposit date: 2013-05-29 Release date: 2014-06-18 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.186 Å) Cite: A G-quadruplex-containing RNA activates fluorescence in a GFP-like fluorophore. Nat.Chem.Biol., 10, 2014
6WV3	Human VKOR with warfarin Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, S-WARFARIN, Vitamin K epoxide reductase, ... Authors: Liu, S, Sukumar, N, Li, W. Deposit date: 2020-05-05 Release date: 2020-11-11 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.197 Å) Cite: Structural basis of antagonizing the vitamin K catalytic cycle for anticoagulation. Science, 371, 2021
3ZUF	Padron off (non-fluorescent) Btrans Descriptor: FLUORESCENT PROTEIN DRONPA Authors: REGIS Faro, A, Carpentier, P, Bourgeois, D. Deposit date: 2011-07-18 Release date: 2011-08-10 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Low-Temperature Chromophore Isomerization Reveals the Photoswitching Mechanism of the Fluorescent Protein Padron. J.Am.Chem.Soc., 133, 2011
3TF4	ENDO/EXOCELLULASE:CELLOTRIOSE FROM THERMOMONOSPORA Descriptor: CALCIUM ION, T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMAIN AND CELLULOSE-BINDING DOMAIN, beta-D-glucopyranose, ... Authors: Sakon, J, Wilson, D.B, Karplus, P.A. Deposit date: 1997-05-30 Release date: 1997-09-04 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structure and mechanism of endo/exocellulase E4 from Thermomonospora fusca. Nat.Struct.Biol., 4, 1997
8G0I	High Affinity nanobodies against GFP Descriptor: CHLORIDE ION, Green fluorescent protein, LaG24 Nanobody, ... Authors: Ketaren, N.E, Rout, M.P, Almo, S. Deposit date: 2023-01-31 Release date: 2024-03-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: High Affinity nanobodies against GFP To Be Published

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