PDB: 923 resultsInfo pagesStatus searchChemie searchBIRD

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2HFC	Structure of S65T Y66F R96A GFP variant in precursor state Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-06-23 Release date: 2007-03-27 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.2 Å) Cite: The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis J.Am.Chem.Soc., 129, 2007
2HCG	Structure of S65T Y66F GFP variant after cyclization, carbon-carbon bond cleavage, and oxygen incorporation reactions Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-06-16 Release date: 2007-03-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.35 Å) Cite: The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis J.Am.Chem.Soc., 129, 2007
2H9W	Green fluorescent protein ground states: the influence of a second protonation site near the chromophore Descriptor: Green fluorescent protein, SULFATE ION Authors: Garau, G. Deposit date: 2006-06-12 Release date: 2007-04-24 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.82 Å) Cite: Green Fluorescent Protein Ground States: The Influence of a Second Protonation Site near the Chromophore. Biochemistry, 46, 2007
2H8Q	Crystal Structure of a Redshifted Mutant (K83M) of the Red Fluorescent Protein dRFP583/dsRed Descriptor: Red fluorescent protein drFP583 Authors: Yarbrough, C.A, Remington, S.J. Deposit date: 2006-06-07 Release date: 2006-08-22 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Novel Chromophores and Buried Charges Control Color in mFruits(,). Biochemistry, 45, 2006
2H6V	Spectroscopic and structural study of the heterotropic linkage between halide and proton ion binding to GFP proteins- E2(GFP) APO FORM Descriptor: Green fluorescent protein, SODIUM ION Authors: Garau, G. Deposit date: 2006-06-01 Release date: 2007-05-15 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (1.47 Å) Cite: Spectroscopic and Structural Study of Proton and Halide Ion Cooperative Binding to GFP Biophys.J., 93, 2007
2H5P	Crystal structure of mStrawberry at pH 9.5 Descriptor: mStrawberry Authors: Shu, X, Remington, S.J. Deposit date: 2006-05-26 Release date: 2006-08-22 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (1.21 Å) Cite: Novel Chromophores and Buried Charges Control Color in mFruits Biochemistry, 45, 2006
2H5O	Crystal structure of mOrange Descriptor: MAGNESIUM ION, mOrange Authors: Shu, X, Remington, S.J. Deposit date: 2006-05-26 Release date: 2006-08-22 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (1.08 Å) Cite: Novel Chromophores and Buried Charges Control Color in mFruits Biochemistry, 45, 2006
2H5Q	Crystal structure of mCherry Descriptor: mCherry Authors: Shu, X, Remington, S.J. Deposit date: 2006-05-26 Release date: 2006-08-22 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (1.36 Å) Cite: Novel Chromophores and Buried Charges Control Color in mFruits Biochemistry, 45, 2006
2H5R	Crystal structure of mStrawberry at pH 10.5 Descriptor: mStrawberry Authors: Shu, X, Remington, S.J. Deposit date: 2006-05-26 Release date: 2006-08-22 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Novel Chromophores and Buried Charges Control Color in mFruits Biochemistry, 45, 2006
2GX2	Crystal structural and functional analysis of GFP-like fluorescent protein Dronpa Descriptor: MAGNESIUM ION, fluorescent protein Dronpa Authors: Hwang, K.Y, Nam, K.-H, Park, S.-Y, Sugiyama, K. Deposit date: 2006-05-08 Release date: 2007-05-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural characterization of the photoswitchable fluorescent protein Dronpa-C62S Biochem.Biophys.Res.Commun., 354, 2007
2GX0	Crystal structural and functional analysis of GFP-like fluorescent protein Descriptor: fluorescent protein Dronpa Authors: Hwang, K.Y, Nam, K.-H, Park, S.-Y, Sugiyama, K. Deposit date: 2006-05-08 Release date: 2007-05-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural characterization of the photoswitchable fluorescent protein Dronpa-C62S Biochem.Biophys.Res.Commun., 354, 2007
2GW3	Crystal structure of stony coral fluorescent protein Kaede, green form Descriptor: Kaede, NICKEL (II) ION Authors: Hayashi, I, Mizuno, H, Miyawaki, A, Ikura, M. Deposit date: 2006-05-03 Release date: 2007-05-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Crystallographic evidence for water-assisted photo-induced peptide cleavage in the stony coral fluorescent protein Kaede. J.Mol.Biol., 372, 2007
2GW4	Crystal structure of stony coral fluorescent protein Kaede, red form Descriptor: Kaede, NICKEL (II) ION Authors: Hayashi, I, Mizuno, H, Miyawako, A, Ikura, M. Deposit date: 2006-05-03 Release date: 2007-05-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystallographic evidence for water-assisted photo-induced peptide cleavage in the stony coral fluorescent protein Kaede. J.Mol.Biol., 372, 2007
2G6X	Crystal structure of a novel green fluorescent protein from marine copepod Pontellina plumata Descriptor: green fluorescent protein 2 Authors: Evdokimov, A.G, Pokross, M.E, Chudakov, D.M. Deposit date: 2006-02-26 Release date: 2006-03-28 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural basis for the fast maturation of Arthropoda green fluorescent protein. Embo Rep., 7, 2006
2G6Y	Crystal structure of the novel green fluorescent protein from marine copepod Pontellina plumata Descriptor: green fluorescent protein 2 Authors: Evdokimov, A.G, Pokross, M.E, Chudakov, D.M. Deposit date: 2006-02-26 Release date: 2006-03-28 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis for the fast maturation of Arthropoda green fluorescent protein. Embo Rep., 7, 2006
2G6E	Structure of cyclized F64L S65A Y66S GFP variant Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P. Deposit date: 2006-02-24 Release date: 2006-04-18 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation. J.Am.Chem.Soc., 128, 2006
2G5Z	Structure of S65G Y66S GFP variant after spontaneous peptide hydrolysis and decarboxylation Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-02-23 Release date: 2006-04-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation. J.Am.Chem.Soc., 128, 2006
2G3O	The 2.1A crystal structure of copGFP Descriptor: green fluorescent protein 2 Authors: Wilmann, P.G. Deposit date: 2006-02-20 Release date: 2006-08-15 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (2.1 Å) Cite: The 2.1A crystal structure of copGFP, a representative member of the copepod clade within the green fluorescent protein superfamily J.Mol.Biol., 359, 2006
2G3D	Structure of S65G Y66A GFP variant after spontaneous peptide hydrolysis Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P. Deposit date: 2006-02-17 Release date: 2006-04-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation. J.Am.Chem.Soc., 128, 2006
2G2S	Structure of S65G Y66S GFP variant after spontaneous peptide hydrolysis Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P. Deposit date: 2006-02-16 Release date: 2006-04-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation. J.Am.Chem.Soc., 128, 2006
2G16	Structure of S65A Y66S GFP variant after backbone fragmentation Descriptor: Green fluorescent protein Authors: Barondeau, D.P. Deposit date: 2006-02-13 Release date: 2006-04-18 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation. J.Am.Chem.Soc., 128, 2006
2FZU	Reduced enolate chromophore intermediate for GFP variant Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-02-10 Release date: 2006-03-14 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (1.25 Å) Cite: Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis. J.Am.Chem.Soc., 128, 2006
2FWQ	Reduced enolate chromophore intermediate for Y66H GFP variant Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-02-02 Release date: 2006-03-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis. J.Am.Chem.Soc., 128, 2006
2DDD	Unique behavior of a histidine responsible for an engineered green-to-red photoconversion process Descriptor: MAGNESIUM ION, SODIUM ION, photoconvertible fluorescent protein Authors: Shimizu, H, Tsutsui, H, Nukina, N, Miyawaki, A. Deposit date: 2006-01-27 Release date: 2006-03-07 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.55 Å) Cite: The E1 mechanism in photo-induced beta-elimination reactions for green-to-red conversion of fluorescent proteins Chem.Biol., 16, 2009
2DDC	Unique behavior of a histidine responsible for an engineered green-to-red photoconversion process Descriptor: MAGNESIUM ION, SODIUM ION, photoconvertible fluorescent protein Authors: Shimizu, H, Tsutsui, H, Nukina, N, Miyawaki, A. Deposit date: 2006-01-27 Release date: 2006-03-07 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.55 Å) Cite: The E1 mechanism in photo-induced beta-elimination reactions for green-to-red conversion of fluorescent proteins. Chem.Biol., 16, 2009

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