Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1MKV
DownloadVisualize
BU of 1mkv by Molmil
CARBOXYLIC ESTER HYDROLASE COMPLEX (PLA2 + TRANSITION STATE ANALOG COMPLEX)
Descriptor: 1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, CALCIUM ION, PHOSPHOLIPASE A2
Authors:Sundaralingam, M.
Deposit date:1997-09-13
Release date:1998-03-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure of the complex of bovine pancreatic phospholipase A2 with a transition-state analogue.
Acta Crystallogr.,Sect.D, 54, 1998
3QDR
DownloadVisualize
BU of 3qdr by Molmil
Structural characterization of the interaction of colicin A, colicin N, and TolB with the TolAIII translocon
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Colicin-A, Protein tolA
Authors:Li, C.
Deposit date:2011-01-19
Release date:2012-01-25
Last modified:2012-06-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural Evidence That Colicin A Protein Binds to a Novel Binding Site of TolA Protein in Escherichia coli Periplasm.
J.Biol.Chem., 287, 2012
4UM3
DownloadVisualize
BU of 4um3 by Molmil
Engineered Ls-AChBP with alpha4-alpha4 binding pocket in complex with NS3920
Descriptor: 1-(6-bromopyridin-3-yl)-1,4-diazepane, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINE BINDING PROTEIN, ...
Authors:Shahsavar, A, Kastrup, J.S, Balle, T, Gajhede, M.
Deposit date:2014-05-14
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Achbp Engineered to Mimic the Alpha4-Alpha4 Binding Pocket in Alpha4Beta2 Nicotinic Acetylcholine Receptors Reveals Interface Specific Interactions Important for Binding and Activity
Mol.Pharmacol., 88, 2015
1EVQ
DownloadVisualize
BU of 1evq by Molmil
THE CRYSTAL STRUCTURE OF THE THERMOPHILIC CARBOXYLESTERASE EST2 FROM ALICYCLOBACILLUS ACIDOCALDARIUS
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SERINE HYDROLASE
Authors:De Simone, G, Galdiero, S, Manco, G, Lang, D, Rossi, M, Pedone, C.
Deposit date:2000-04-20
Release date:2000-11-22
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A snapshot of a transition state analogue of a novel thermophilic esterase belonging to the subfamily of mammalian hormone-sensitive lipase.
J.Mol.Biol., 303, 2000
7E7E
DownloadVisualize
BU of 7e7e by Molmil
The co-crystal structure of ACE2 with Fab
Descriptor: Processed angiotensin-converting enzyme 2, ZINC ION, h11B11-Fab
Authors:Xiao, J.Y, Zhang, Y.
Deposit date:2021-02-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:A broadly neutralizing humanized ACE2-targeting antibody against SARS-CoV-2 variants.
Nat Commun, 12, 2021
4UM1
DownloadVisualize
BU of 4um1 by Molmil
Engineered Ls-AChBP with alpha4-alpha4 binding pocket in complex with NS3573
Descriptor: 1-(5-ethoxypyridin-3-yl)-1,4-diazepane, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINE-BINDING PROTEIN
Authors:Shahsavar, A, Kastrup, J.S, Balle, T, Gajhede, M.
Deposit date:2014-05-14
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Achbp Engineered to Mimic the Alpha4-Alpha4 Binding Pocket in Alpha4Beta2 Nicotinic Acetylcholine Receptors Reveals Interface Specific Interactions Important for Binding and Activity
Mol.Pharmacol., 88, 2015
1F33
DownloadVisualize
BU of 1f33 by Molmil
THE STRUCTURAL BASIS FOR DNA PROTECTION BY E. COLI DPS PROTEIN
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA PROTECTION DURING STARVATION PROTEIN
Authors:Luo, J, Liu, D, White, M.A, Fox, R.O.
Deposit date:2000-05-31
Release date:2003-06-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Structural Basis for DNA Protection by E. coli Dps Protein
To be Published
1F30
DownloadVisualize
BU of 1f30 by Molmil
THE STRUCTURAL BASIS FOR DNA PROTECTION BY E. COLI DPS PROTEIN
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA PROTECTION DURING STARVATION PROTEIN, ZINC ION
Authors:Luo, J, Liu, D, White, M.A, Fox, R.O.
Deposit date:2000-05-31
Release date:2003-06-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:The Structural Basis for DNA Protection by E. coli Dps Protein
To be Published
3IMM
DownloadVisualize
BU of 3imm by Molmil
Crystal structure of Putative glycosyl hydrolase (YP_001301887.1) from Parabacteroides distasonis ATCC 8503 at 2.00 A resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Putative secreted glycosylhydrolase, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-08-10
Release date:2009-08-18
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Putative glycosyl hydrolase (YP_001301887.1) from Parabacteroides distasonis ATCC 8503 at 2.00 A resolution
To be published
1FHF
DownloadVisualize
BU of 1fhf by Molmil
THE STRUCTURE OF SOYBEAN PEROXIDASE
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Henriksen, A, Mirza, O, Indiana, C, Welinder, K, Teilum, K, Gajhede, M.
Deposit date:2000-08-01
Release date:2001-02-14
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of soybean seed coat peroxidase: a plant peroxidase with unusual stability and haem-apoprotein interactions.
Protein Sci., 10, 2001
3SNV
DownloadVisualize
BU of 3snv by Molmil
Crystal structure of Symfoil-4T Permutation #1: de novo designed beta-trefoil architecture with symmetric primary structure
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, Symfoil-4T/Permutation #1 synthetic protein
Authors:Blaber, M, Longo, L, Lee, J.
Deposit date:2011-06-29
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Folding pathway redundancy in symmetric protein architecture
To be Published
7F8T
DownloadVisualize
BU of 7f8t by Molmil
Re-refinement of the 2XRY X-ray structure of archaeal class II CPD photolyase from Methanosarcina mazei
Descriptor: Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Maestre-Reyna, M, Yang, C.-H, Huang, W.C, Nango, E, Gusti-Ngurah-Putu, E.-P, Franz-Badur, S, Wu, W.-J, Wu, H.-Y, Wang, P.-H, Liao, J.-H, Lee, C.-C, Huang, K.-F, Chang, Y.-K, Weng, J.-H, Sugahara, M, Owada, S, Joti, Y, Tanaka, R, Tono, K, Kiontke, S, Yamamoto, J, Iwata, S, Essen, L.-O, Bessho, Y, Tsai, M.-D.
Deposit date:2021-07-02
Release date:2022-03-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
Nat.Chem., 14, 2022
3U4Y
DownloadVisualize
BU of 3u4y by Molmil
The crystal structure of a functionally unknown protein (Dtox_1751) from Desulfotomaculum acetoxidans DSM 771.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, uncharacterized protein
Authors:Tan, K, Bigelow, L, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-10-10
Release date:2011-10-26
Method:X-RAY DIFFRACTION (2.994 Å)
Cite:The crystal structure of a functionally unknown protein (Dtox_1751) from Desulfotomaculum acetoxidans DSM 771.
To be Published
1G8F
DownloadVisualize
BU of 1g8f by Molmil
ATP SULFURYLASE FROM S. CEREVISIAE
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, CADMIUM ION, ...
Authors:Ullrich, T.C, Blaesse, M, Huber, R.
Deposit date:2000-11-17
Release date:2001-05-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of ATP sulfurylase from Saccharomyces cerevisiae, a key enzyme in sulfate activation.
EMBO J., 20, 2001
5FHM
DownloadVisualize
BU of 5fhm by Molmil
Crystal structure of the GluA2 ligand-binding domain (S1S2J) in complex with (S)-2-Amino-3-(5-(2-(3-(aminomethyl)benzyl)-2H-tetrazol-5-yl)-3-hydroxyisoxazol-4-yl)propanoic acid at resolution 1.55 A resolution
Descriptor: (2~{S})-3-[5-[2-[[3-(aminomethyl)phenyl]methyl]-1,2,3,4-tetrazol-5-yl]-3-oxidanyl-1,2-oxazol-4-yl]-2-azanyl-propanoic acid, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Kastrup, J.S, Frydenvang, K, Al-musaed, A.
Deposit date:2015-12-22
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Tweaking Subtype Selectivity and Agonist Efficacy at (S)-2-Amino-3-(3-hydroxy-5-methyl-isoxazol-4-yl)propionic acid (AMPA) Receptors in a Small Series of BnTetAMPA Analogues.
J.Med.Chem., 59, 2016
4X6O
DownloadVisualize
BU of 4x6o by Molmil
FACTOR XIA IN COMPLEX WITH THE INHIBITOR methyl (4-{4-chloro-2-[(1S)-1-({3-[5-chloro-2-(1H-tetrazol-1-yl)phenyl]propanoyl}amino)-2-phenylethyl]-1H-imidazol-5-yl}phenyl)carbamate
Descriptor: 1,2-ETHANEDIOL, Coagulation factor XI, light chain, ...
Authors:Wei, A.
Deposit date:2014-12-08
Release date:2015-02-18
Last modified:2015-04-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-based design of inhibitors of coagulation factor XIa with novel P1 moieties.
Bioorg.Med.Chem.Lett., 25, 2015
1G5A
DownloadVisualize
BU of 1g5a by Molmil
AMYLOSUCRASE FROM NEISSERIA POLYSACCHAREA
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AMYLOSUCRASE, ...
Authors:Skov, L.K, Mirza, O, Henriksen, A, De Montalk, G.P, Remaud-Simeon, M, Sarcabal, P, Willemot, R.-M, Monsan, P, Gajhede, M.
Deposit date:2000-10-31
Release date:2001-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Amylosucrase, A Glucan-synthesizing Enzyme from the alpha-Amylase Family
J.Biol.Chem., 276, 2001
1G94
DownloadVisualize
BU of 1g94 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE TERNARY COMPLEX BETWEEN PSYCHROPHILIC ALPHA AMYLASE FROM PSEUDOALTEROMONAS HALOPLANCTIS IN COMPLEX WITH A HEPTA-SACCHARIDE AND A TRIS MOLECULE
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4,6-dideoxy-4-{[(1S,5R,6S)-3-formyl-5,6-dihydroxy-4-oxocyclohex-2-en-1-yl]amino}-alpha-D-xylo-hex-5-enopyranose-(1-4)-alpha-D-glucopyranose, 4,6-dideoxy-4-{[(1S,5R,6S)-3-formyl-5,6-dihydroxy-4-oxocyclohex-2-en-1-yl]amino}-alpha-D-xylo-hex-5-enopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Aghajari, N, Roth, M, Haser, R.
Deposit date:2000-11-22
Release date:2001-12-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystallographic evidence of a transglycosylation reaction: ternary complexes of a psychrophilic alpha-amylase.
Biochemistry, 41, 2002
1G8G
DownloadVisualize
BU of 1g8g by Molmil
ATP SULFURYLASE FROM S. CEREVISIAE: THE BINARY PRODUCT COMPLEX WITH APS
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ADENOSINE-5'-PHOSPHOSULFATE, ...
Authors:Ullrich, T.C, Blaesse, M, Huber, R.
Deposit date:2000-11-17
Release date:2001-05-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of ATP sulfurylase from Saccharomyces cerevisiae, a key enzyme in sulfate activation.
EMBO J., 20, 2001
1G5Q
DownloadVisualize
BU of 1g5q by Molmil
EPID H67N COMPLEXED WITH SUBSTRATE PEPTIDE DSYTC
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, EPIDERMIN MODIFYING ENZYME EPID, FLAVIN MONONUCLEOTIDE, ...
Authors:Blaesse, M, Kupke, T, Huber, R, Steinbacher, S.
Deposit date:2000-11-02
Release date:2001-05-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Crystal structure of the peptidyl-cysteine decarboxylase EpiD complexed with a pentapeptide substrate.
EMBO J., 19, 2000
1GNG
DownloadVisualize
BU of 1gng by Molmil
Glycogen synthase kinase-3 beta (GSK3) complex with FRATtide peptide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FRATTIDE, GLYCOGEN SYNTHASE KINASE-3 BETA, ...
Authors:Bax, B, Carter, P.S, Lewis, C, Guy, A.R, Bridges, A, Tanner, R, Pettman, G, Mannix, C, Culbert, A.A, Brown, M.J.B, Smith, D.G, Reith, A.D.
Deposit date:2001-10-04
Release date:2002-10-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Structure of Phosphorylated Gsk-3Beta Complexed with a Peptide, Frattide, that Inhibits Beta-Catenin Phosphorylation
Structure, 9, 2001
3Q7X
DownloadVisualize
BU of 3q7x by Molmil
Crystal structure of Symfoil-4P/PV1: de novo designed beta-trefoil architecture with symmetric primary structure, primitive version 1
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, de novo designed beta-trefoil architecture with symmetric primary structure
Authors:Blaber, M, Lee, J.
Deposit date:2011-01-05
Release date:2012-01-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein.
Proc.Natl.Acad.Sci.USA, 110, 2013
1GKA
DownloadVisualize
BU of 1gka by Molmil
The molecular basis of the coloration mechanism in lobster shell. beta-crustacyanin at 3.2 A resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ASTAXANTHIN, ...
Authors:Cianci, M, Rizkallah, P.J, Olczak, A, Raftery, J, Chayen, N.E, Zagalsky, P.F, Helliwell, J.R.
Deposit date:2001-08-10
Release date:2002-08-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.23 Å)
Cite:The Molecular Basis of the Coloration Mechanism in Lobster Shell: Beta -Crustacyanin at 3.2-A Resolution
Proc.Natl.Acad.Sci.USA, 99, 2002
1GXT
DownloadVisualize
BU of 1gxt by Molmil
Hydrogenase Maturation Protein HypF "acylphosphatase-like" N-terminal domain (HypF-ACP) in complex with Sulfate
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, HYDROGENASE MATURATION PROTEIN HYPF, ...
Authors:Rosano, C, Zuccotti, S, Stefani, M, Bucciantini, M, Ramponi, G, Bolognesi, M.
Deposit date:2002-04-11
Release date:2002-09-12
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Crystal Structure and Anion Binding in the Prokaryotic Hydrogenase Maturation Factor Hypf Acylphosphatase-Like Domain
J.Mol.Biol., 321, 2002
3TIQ
DownloadVisualize
BU of 3tiq by Molmil
Crystal structure of Staphylococcus aureus SasG G51-E-G52 module
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, Surface protein G
Authors:Gruszka, D.T, Wojdyla, J.A, Turkenburg, J.P, Potts, J.R.
Deposit date:2011-08-21
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8739 Å)
Cite:Staphylococcal biofilm-forming protein has a contiguous rod-like structure.
Proc.Natl.Acad.Sci.USA, 109, 2012

222624

건을2024-07-17부터공개중

PDB statisticsPDBj update infoContact PDBjnumon