PDB: 222415 resultsInfo pagesStatus searchChemie searchBIRD

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4EG3	Trypanosoma brucei methionyl-tRNA synthetase in complex with product methionyl-adenylate Descriptor: GLYCEROL, Methionyl-tRNA synthetase, putative, ... Authors: Koh, C.Y, Kim, J.E, Shibata, S, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J. Deposit date: 2012-03-30 Release date: 2012-09-12 Last modified: 2017-11-15 Method: X-RAY DIFFRACTION (2.94 Å) Cite: Distinct States of Methionyl-tRNA Synthetase Indicate Inhibitor Binding by Conformational Selection. Structure, 20, 2012
4EHV	Human p38 MAP kinase in complex with NP-F10 and RL87 Descriptor: (1R,5S)-3-(4-chlorobenzoyl)-1,2,3,4,5,6-hexahydro-8H-1,5-methanopyrido[1,2-a][1,5]diazocin-8-one, Mitogen-activated protein kinase 14, N~4~-cyclopropyl-2-phenylquinazoline-4,7-diamine Authors: Over, B, Gruetter, C, Waldmann, H, Rauh, D. Deposit date: 2012-04-04 Release date: 2012-12-05 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Natural-product-derived fragments for fragment-based ligand discovery. Nat Chem, 5, 2012
4EI8	Crystal structure of Bacillus cereus TubZ, apo-form Descriptor: Plasmid replication protein RepX Authors: Hayashi, I, Hoshino, S. Deposit date: 2012-04-05 Release date: 2012-08-15 Last modified: 2014-07-23 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Filament formation of the FtsZ/tubulin-like protein TubZ from the Bacillus cereus pXO1 plasmid. J.Biol.Chem., 287, 2012
4KRA	Salmonella typhi OmpF complex with Ciprofloxacin Descriptor: 1-CYCLOPROPYL-6-FLUORO-4-OXO-7-PIPERAZIN-1-YL-1,4-DIHYDROQUINOLINE-3-CARBOXYLIC ACID, Outer membrane protein F Authors: Madhuranayaki, T, Balasubramaniam, D, Krishnaswamy, S. Deposit date: 2013-05-16 Release date: 2014-05-28 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (3.32 Å) Cite: Salmonella typhi OmpF complex with Ciprofloxacin To be published
4EIF	Crystal structure of cytochrome c6C L50Q mutant from Synechococcus sp. PCC 7002 Descriptor: CHLORIDE ION, Cytochrome c6, HEME C, ... Authors: Krzywda, S, Bialek, W, Zatwarnicki, P, Jaskolski, M, Szczepaniak, A. Deposit date: 2012-04-05 Release date: 2013-04-10 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.04 Å) Cite: Cytochrome c6 and c6C from Synechococcus sp. PCC 7002 - structure and function. To be Published
4KRO	Nanobody/VHH domain EgA1 in complex with the extracellular region of EGFR Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cetuximab heavy chain, ... Authors: Ferguson, K.M, Schmitz, K.R. Deposit date: 2013-05-16 Release date: 2013-08-28 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.054 Å) Cite: Structural Evaluation of EGFR Inhibition Mechanisms for Nanobodies/VHH Domains. Structure, 21, 2013
4KA7	Structure of Organellar OligoPeptidase (E572Q) in complex with an endogenous substrate Descriptor: CHLORIDE ION, GLYCEROL, Oligopeptidase A, ... Authors: Berntsson, R.P.-A, Kmiec, B, Teixeira, P.F, Svensson, L.M, Bakali, A, Glaser, E, Stenmark, P. Deposit date: 2013-04-22 Release date: 2013-09-18 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Organellar oligopeptidase (OOP) provides a complementary pathway for targeting peptide degradation in mitochondria and chloroplasts. Proc. Natl. Acad. Sci. U.S.A., 110, 2013
4KAN	Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 2-(2,5-dimethyl-1,3-thiazol-4-yl)acetic acid Descriptor: (2,5-dimethyl-1,3-thiazol-4-yl)acetic acid, ADENOSINE, POTASSIUM ION, ... Authors: Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) Deposit date: 2013-04-22 Release date: 2013-05-22 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 2-(2,5-dimethyl-1,3-thiazol-4-yl)acetic acid To be Published
4EQP	Crystal structure of Staphylococcal nuclease variant Delta+PHS I72D at cryogenic temperature Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease Authors: Robinson, A.C, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B. Deposit date: 2012-04-19 Release date: 2012-05-02 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Crystal structure of Staphylococcal nuclease variant Delta+PHS I72D at cryogenic temperature To be Published
4EQN	Crystal structure of Staphylococcal nuclease variant Delta+PHS V23E/I72K at cryogenic temperature Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease Authors: Robinson, A.C, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B. Deposit date: 2012-04-19 Release date: 2012-05-02 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of Staphylococcal nuclease variant Delta+PHS V23E/I72K at cryogenic temperature To be Published
4EQW	Crystal Structure of the Y361F, Y419F Mutant of Staphylococcus aureus CoADR Descriptor: CHLORIDE ION, COENZYME A, Coenzyme A disulfide reductase, ... Authors: Edwards, J.S, Wallace, B.D, Wallen, J.R, Claiborne, A, Redinbo, M.R. Deposit date: 2012-04-19 Release date: 2012-10-17 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Turnover-Dependent Covalent Inactivation of Staphylococcus aureus Coenzyme A-Disulfide Reductase by Coenzyme A-Mimetics: Mechanistic and Structural Insights. Biochemistry, 51, 2012
4ESP	Crystal Structure of Peanut Allergen Ara h 5 Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, Profilin Authors: Wang, Y, Zhang, Y.Z. Deposit date: 2012-04-23 Release date: 2013-03-06 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.1 Å) Cite: Crystal Structure of Peanut ( Arachis hypogaea ) Allergen Ara h 5. J.Agric.Food Chem., 61, 2013
4EU1	Structure of a mitochondrial aspartate aminotransferase from Trypanosoma brucei Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Mitochondrial aspartate aminotransferase Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2012-04-25 Release date: 2012-05-16 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structures of aspartate aminotransferases from Trypanosoma brucei, Leishmania major and Giardia lamblia. Acta Crystallogr F Struct Biol Commun, 71, 2015
4EVO	Crystal structure of Staphylococcal nuclease variant NVIAGA/E122G at cryogenic temperature Descriptor: PHOSPHATE ION, Thermonuclease Authors: Doctrow, B.M, Schlessman, J.L, Garcia-Moreno E, B, Heroux, A. Deposit date: 2012-04-26 Release date: 2012-05-23 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Local flexibility as a determinant of pKa values of surface ionizable groups in proteins To be Published
4EXR	Crystal structure of a putative lipoprotein (CD1622) from Clostridium difficile 630 at 1.85 A resolution Descriptor: PHOSPHATE ION, Putative lipoprotein, SODIUM ION Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2012-04-30 Release date: 2012-06-27 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Crystal structure of a putative lipoprotein (CD1622) from Clostridium difficile 630 at 1.85 A resolution To be published
4KRF	Structure of Human Argonaute-1 let-7 complex Descriptor: Protein argonaute-1, RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*UP*U)-3') Authors: Faehnle, C.R, Elkayam, E, Joshua-Tor, L. Deposit date: 2013-05-16 Release date: 2013-06-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.101 Å) Cite: The making of a slicer: activation of human argonaute-1. Cell Rep, 3, 2013
4EG7	Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor Chem 1331 Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, METHIONINE, ... Authors: Koh, C.Y, Kim, J.E, Shibata, S, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J. Deposit date: 2012-03-30 Release date: 2012-09-12 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.747 Å) Cite: Distinct States of Methionyl-tRNA Synthetase Indicate Inhibitor Binding by Conformational Selection. Structure, 20, 2012
4EFA	Crystal Structure of the Heterotrimeric EGChead Peripheral Stalk Complex of the Yeast Vacuolar ATPase - second conformation Descriptor: SULFATE ION, V-type proton ATPase subunit C, V-type proton ATPase subunit E, ... Authors: Oot, R.A, Huang, L.S, Berry, E.A, Wilkens, S. Deposit date: 2012-03-29 Release date: 2012-10-10 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.8163 Å) Cite: Crystal Structure of the Yeast Vacuolar ATPase Heterotrimeric EGC(head) Peripheral Stalk Complex. Structure, 20, 2012
4EFV	Crystal structure of OIF from Llama seminal plasma Descriptor: CHLORIDE ION, Ovulation-inducing factor (OIF), PHOSPHATE ION Authors: Van Straaten, K.E, Leduc, Y.A, Ratto, M.H, Valderrama, X.P, Delbaere, T.J, Pierson, R.A, Adams, G.P. Deposit date: 2012-03-30 Release date: 2012-08-22 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.32 Å) Cite: The nerve of ovulation-inducing factor in semen. Proc.Natl.Acad.Sci.USA, 109, 2012
4EG5	Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor Chem 1312 Descriptor: 2-({3-[(3,5-dichlorobenzyl)amino]propyl}amino)quinolin-4(1H)-one, DIMETHYL SULFOXIDE, GLYCEROL, ... Authors: Koh, C.Y, Kim, J.E, Shibata, S, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J. Deposit date: 2012-03-30 Release date: 2012-09-12 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Distinct States of Methionyl-tRNA Synthetase Indicate Inhibitor Binding by Conformational Selection. Structure, 20, 2012
4EH8	Human p38 MAP kinase in complex with NP-F7 and RL87 Descriptor: Mitogen-activated protein kinase 14, N~4~-cyclopropyl-2-phenylquinazoline-4,7-diamine, [3-(benzyloxy)phenyl]methanol Authors: Over, B, Gruetter, C, Waldmann, H, Rauh, D. Deposit date: 2012-04-02 Release date: 2012-12-05 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Natural-product-derived fragments for fragment-based ligand discovery. Nat Chem, 5, 2012
4NUZ	Crystal structure of a glycosynthase mutant (D233Q) of EndoS, an endo-beta-N-acetyl-glucosaminidase from Streptococcus pyogenes Descriptor: CALCIUM ION, Endo-beta-N-acetylglucosaminidase F2 Authors: Trastoy, B, Guenther, S, Snyder, G.A, Sundberg, E.J. Deposit date: 2013-12-04 Release date: 2014-04-09 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.905 Å) Cite: Crystal structure of Streptococcus pyogenes EndoS, an immunomodulatory endoglycosidase specific for human IgG antibodies. Proc.Natl.Acad.Sci.USA, 111, 2014
4NWS	Crystal structure of PSLssmKate, a photoswitchable LSSmKate variant Descriptor: fluorescent protein Authors: Malashkevich, V.N, Piatkevich, K, Almo, S.C, Verkhusha, V. Deposit date: 2013-12-06 Release date: 2014-09-17 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Crystal structure of PSLssmKate, a photoswitchable LSSmKate variant TO BE PUBLISHED
4NN2	Protein Crystal Structure of Human Borjeson-Forssman-Lehmann Syndrome Associated Protein PHF6 Descriptor: GLYCEROL, PHD finger protein 6, ZINC ION Authors: Liu, Z, Li, F, Zhang, J, Mei, Y, Wu, J, Shi, Y. Deposit date: 2013-11-16 Release date: 2014-02-26 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.472 Å) Cite: Crystal Structure of the second extended PHD domain of human PHF6 protein J.Biol.Chem., 2014
4NR4	Crystal structure of the bromodomain of human CREBBP in complex with an isoxazolyl-benzimidazole ligand Descriptor: 1,2-ETHANEDIOL, 1-(4-chlorobenzyl)-5-(3,5-dimethyl-1,2-oxazol-4-yl)-1H-benzimidazole, CREB-binding protein, ... Authors: Filippakopoulos, P, Picaud, S, Felletar, I, Hay, D, Fedorov, O, Martin, S, von Delft, F, Brennan, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC) Deposit date: 2013-11-26 Release date: 2013-12-18 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.69 Å) Cite: Crystal structure of the bromodomain of human CREBBP in complex with an isoxazolyl-benzimidazole ligand TO BE PUBLISHED

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