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6TUU
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BU of 6tuu by Molmil
Leishmania infantum Rad51 surrogate LiRadA10 in complex with 5,6,7,8-tetrahydro-2-naphthoic acid
Descriptor: 5,6,7,8-tetrahydronaphthalene-2-carboxylic acid, CHLORIDE ION, DNA repair and recombination protein RadA, ...
Authors:Pantelejevs, T, Hyvonen, M.
Deposit date:2020-01-08
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Development of dedicated crystallographic systems for structure-guided drug discovery
To Be Published
6U9X
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BU of 6u9x by Molmil
Structure of T. brucei MERS1-RNA complex
Descriptor: Mitochondrial edited mRNA stability factor 1, RNA (5'-R(*GP*AP*GP*AP*GP*GP*GP*GP*GP*UP*U)-3')
Authors:Schumacher, M.A.
Deposit date:2019-09-09
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of MERS1, the 5' processing enzyme of mitochondrial mRNAs inTrypanosoma brucei.
Rna, 26, 2020
6B5X
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BU of 6b5x by Molmil
Beta-Lactamase, unmixed shards crystal form
Descriptor: Beta-lactamase, PHOSPHATE ION
Authors:Pandey, S.
Deposit date:2017-09-29
Release date:2018-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Enzyme intermediates captured "on the fly" by mix-and-inject serial crystallography.
BMC Biol., 16, 2018
6B6F
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BU of 6b6f by Molmil
Beta-Lactamase, mixed with Ceftriaxone, needles crystal form, 2sec
Descriptor: Beta-lactamase, Ceftriaxone
Authors:Pandey, S, Schmidt, M.
Deposit date:2017-10-01
Release date:2018-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Enzyme intermediates captured "on the fly" by mix-and-inject serial crystallography.
BMC Biol., 16, 2018
2P86
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BU of 2p86 by Molmil
The high resolution crystal structure of rhodesain, the major cathepsin L protease from T. brucei rhodesiense, bound to inhibitor K11002
Descriptor: 1,2-ETHANEDIOL, 3-[[N-[MORPHOLIN-N-YL]-CARBONYL]-PHENYLALANINYL-AMINO]-5- PHENYL-PENTANE-1-SULFONYLBENZENE, Cysteine protease
Authors:Brinen, L.S, Marion, R.
Deposit date:2007-03-21
Release date:2008-04-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:THE high resolution structure of rhodesain, the major cathepsin L protease from trypanosoma brucei rhodesiense, illustrates the basis for differences in inhibition profiles from other papain family cysteine proteases
To be Published
5R85
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BU of 5r85 by Molmil
PanDDA analysis group deposition INTERLEUKIN-1 BETA -- Fragment Z1262246195 in complex with INTERLEUKIN-1 BETA
Descriptor: 3,3,3-tris(fluoranyl)-1-piperazin-1-yl-propan-1-one, Interleukin-1 beta, SULFATE ION
Authors:De Nicola, G.F, Nichols, C.E.
Deposit date:2020-03-03
Release date:2020-04-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Mining the PDB for Tractable Cases Where X-ray Crystallography Combined with Fragment Screens Can Be Used to Systematically Design Protein-Protein Inhibitors: Two Test Cases Illustrated by IL1 beta-IL1R and p38 alpha-TAB1 Complexes.
J.Med.Chem., 63, 2020
4KS0
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BU of 4ks0 by Molmil
Pyruvate kinase (PYK) from Trypanosoma cruzi in the presence of Magnesium, oxalate and F26BP
Descriptor: 2,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, OXALATE ION, ...
Authors:Morgan, H.P, Zhong, W, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2013-05-17
Release date:2014-11-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of pyruvate kinases display evolutionarily divergent allosteric strategies.
R Soc Open Sci, 1, 2014
5S8V
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BU of 5s8v by Molmil
PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
Descriptor: 4-(furan-2-carbonyl)-N-(propan-2-yl)piperazine-1-carboxamide, PH-interacting protein
Authors:Grosjean, H, Aimon, A, Hassel-Hart , S, Krojer, T, Talon, R, Douangamath, A, Koekemoer, L, Biggin, P.C, Spencer, J, von Delft, F.
Deposit date:2021-01-22
Release date:2021-02-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Crystal Structures of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in space group C2 soaked with crude reaction mixtures
To Be Published
2M6Y
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BU of 2m6y by Molmil
The solution structure of the J-domain of human DnaJA1
Descriptor: DnaJ homolog subfamily A member 1
Authors:Stark, J.L, Mehla, K, Chaika, N, Acton, T.B, Xiao, R, Singh, P.K, Montelione, G.T, Powers, R, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-04-14
Release date:2013-06-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and function of human DnaJ homologue subfamily a member 1 (DNAJA1) and its relationship to pancreatic cancer.
Biochemistry, 53, 2014
6P5R
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BU of 6p5r by Molmil
Structure of T. brucei MERS1-GDP complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Mitochondrial edited mRNA stability factor 1
Authors:Schumacher, M.A.
Deposit date:2019-05-30
Release date:2019-11-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structures of MERS1, the 5' processing enzyme of mitochondrial mRNAs inTrypanosoma brucei.
Rna, 26, 2020
4JIB
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BU of 4jib by Molmil
Crystal structure of of PDE2-inhibitor complex
Descriptor: 1-(2-hydroxyethyl)-3-(2-methylbutan-2-yl)-5-[4-(2-methyl-1H-imidazol-1-yl)phenyl]-6,7-dihydropyrazolo[4,3-e][1,4]diazepin-8(1H)-one, MAGNESIUM ION, ZINC ION, ...
Authors:Pandit, J.
Deposit date:2013-03-05
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Discovery of potent, selective, bioavailable phosphodiesterase 2 (PDE2) inhibitors active in an osteoarthritis pain model, Part I: Transformation of selective pyrazolodiazepinone phosphodiesterase 4 (PDE4) inhibitors into selective PDE2 inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
6BQ0
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BU of 6bq0 by Molmil
Structure of human monoacylglycerol lipase bound to a covalent inhibitor
Descriptor: 1-({(1R,5S,6r)-6-[1-(4-fluorophenyl)-1H-pyrazol-3-yl]-3-azabicyclo[3.1.0]hexane-3-carbonyl}oxy)pyrrolidine-2,5-dione, Monoglyceride lipase
Authors:Pandit, J.
Deposit date:2017-11-27
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of Trifluoromethyl Glycol Carbamates as Potent and Selective Covalent Monoacylglycerol Lipase (MAGL) Inhibitors for Treatment of Neuroinflammation.
J. Med. Chem., 61, 2018
4TOY
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BU of 4toy by Molmil
Structure of 35O22 Fab, a HIV-1 neutralizing antibody
Descriptor: 35O22 Fab Heavy chain, 35O22 Fab Light chain
Authors:Pancera, M, Kwong, P.D.
Deposit date:2014-06-06
Release date:2014-09-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Broad and potent HIV-1 neutralization by a human antibody that binds the gp41-gp120 interface.
Nature, 515, 2014
4KCU
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BU of 4kcu by Molmil
Pyruvate kinase (PYK) from Trypanosoma brucei soaked with D-Malate
Descriptor: 2,6-di-O-phosphono-beta-D-fructofuranose, D-MALATE, MAGNESIUM ION, ...
Authors:Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2013-04-24
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Pyruvate kinases have an intrinsic and conserved decarboxylase activity.
Biochem.J., 458, 2014
3TIK
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BU of 3tik by Molmil
Sterol 14-alpha demethylase (CYP51) from Trypanosoma brucei in complex with the tipifarnib derivative 6-((4-chlorophenyl)(methoxy)(1-methyl-1H-imidazol-5-yl)methyl)-4-(2,6-difluorophenyl)-1-methylquinolin-2(1H)-one
Descriptor: 6-[(R)-(4-chlorophenyl)(methoxy)(1-methyl-1H-imidazol-5-yl)methyl]-4-(2,6-difluorophenyl)-1-methylquinolin-2(1H)-one, PROTOPORPHYRIN IX CONTAINING FE, sterol 14-alpha demethylase (CYP51)
Authors:Hargrove, T.Y, Wawrzak, Z, Kraus, J.M, Gelb, M.H, Buckner, F.S, Waterman, M.R, Lepesheva, G.I.
Deposit date:2011-08-20
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Pharmacological characterization, structural studies, and in vivo activities of anti-chagas disease lead compounds derived from tipifarnib.
Antimicrob.Agents Chemother., 56, 2012
2N7P
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BU of 2n7p by Molmil
Solution structure of PDZ domain
Descriptor: Putative uncharacterized protein
Authors:Mei, S.
Deposit date:2015-09-17
Release date:2015-10-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of Q388A3 PDZ domain from Trypanosoma brucei and its interaction with OMP-like peptide
To be Published
6B5T
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BU of 6b5t by Molmil
Structure of PfCSP peptide 29 with human antibody CIS42
Descriptor: AMMONIUM ION, CIS42 Fab Heavy chain, CIS42 Fab Light chain, ...
Authors:Pancera, M, Weidle, C.
Deposit date:2017-09-29
Release date:2018-03-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (2.222 Å)
Cite:A human monoclonal antibody prevents malaria infection by targeting a new site of vulnerability on the parasite.
Nat. Med., 24, 2018
7TAN
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BU of 7tan by Molmil
Structure of VRK1 C-terminal tail bound to nucleosome core particle
Descriptor: Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, Histone H3.2, ...
Authors:Spangler, C.J, Budziszewski, G.R, McGinty, R.K.
Deposit date:2021-12-21
Release date:2022-05-04
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Multivalent DNA and nucleosome acidic patch interactions specify VRK1 mitotic localization and activity.
Nucleic Acids Res., 50, 2022
8ALS
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BU of 8als by Molmil
The apo-crystal structure of a variant form of the 28-kDa Schistosoma haematobium glutathione transferase
Descriptor: Glutathione S-transferase class-mu 28 kDa isozyme, SODIUM ION
Authors:Pandian, R, Makumbe, H.H, Sayed, Y, Achilonu, I.A.
Deposit date:2022-08-01
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The apo-crystal structure of a variant form of the 28-kDa Schistosoma haematobium glutathione transferase
To Be Published
6Y1E
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BU of 6y1e by Molmil
Crystal structure of human glutathione transferase P1-1 (hGSTP1-1) that was co-crystallised in the presence of indanyloxyacetic acid-94 (IAA-94)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[[6,7-bis(chloranyl)-2-cyclopentyl-2-methyl-1-oxidanylidene-3~{H}-inden-5-yl]oxy]ethanoic acid, GLUTATHIONE, ...
Authors:Pandian, R, Worth, R, Thangaraj, V, Sayed, Y, Dirr, H.W.
Deposit date:2020-02-12
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.402 Å)
Cite:The interaction of IAA-94 with the soluble conformation of the CLIC1 protein and its structural homolog hGSTP1-1
To Be Published
8AIH
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BU of 8aih by Molmil
Crystal Structure of Enterococcus faecium Nicotinate Nucleotide Adenylyltransferase at 1.9 Angstroms Resolution
Descriptor: DIHYDROGENPHOSPHATE ION, Probable nicotinate-nucleotide adenylyltransferase, SULFATE ION
Authors:Pandian, R, Jeje, O.A, Sayed, Y, Achilonu, I.A.
Deposit date:2022-07-26
Release date:2023-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Obtaining high yield recombinant Enterococcus faecium nicotinate nucleotide adenylyltransferase for X-ray crystallography and biophysical studies.
Int.J.Biol.Macromol., 250, 2023
8AII
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BU of 8aii by Molmil
High Resolution Crystal Structure of Enterococcus faecium Nicotinate Nucleotide Adenylyltransferase Complexed with Adenine
Descriptor: ADENINE, MAGNESIUM ION, Probable nicotinate-nucleotide adenylyltransferase, ...
Authors:Pandian, R, Jeje, O.A, Sayed, Y, Achilonu, I.A.
Deposit date:2022-07-26
Release date:2023-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Obtaining high yield recombinant Enterococcus faecium nicotinate nucleotide adenylyltransferase for X-ray crystallography and biophysical studies.
Int.J.Biol.Macromol., 250, 2023
8BHZ
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BU of 8bhz by Molmil
The apo-crystal structure of a variant form of the 28-kDa Schistosoma haematobium glutathione transferase in orthorhombic form
Descriptor: Glutathione S-transferase class-mu 28 kDa isozyme
Authors:Pandian, R, Mfeka, S.M, Onisuru, O, Sayed, Y, Achilonu, I.A.
Deposit date:2022-11-01
Release date:2022-11-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Biophysical and biochemical characterization of 28-kDa glutathione transferase from Schistosoma haematobium
To Be Published
6QPW
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BU of 6qpw by Molmil
Structural basis of cohesin ring opening
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Sister chromatid cohesion protein 1, ...
Authors:Panne, D, Muir, K.W, Li, Y, Weis, F.
Deposit date:2019-02-15
Release date:2020-02-05
Last modified:2020-03-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The structure of the cohesin ATPase elucidates the mechanism of SMC-kleisin ring opening.
Nat.Struct.Mol.Biol., 27, 2020
7UO6
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BU of 7uo6 by Molmil
NMR structure of Pheromone-binding protein 2 in Ostrinia furnacalis
Descriptor: Pheromone binding protein 2
Authors:Ayyappan, S, Mohanty, S.
Deposit date:2022-04-12
Release date:2023-02-15
Method:SOLUTION NMR
Cite:Ostrinia furnacalis PBP2 solution NMR structure: Insight into ligand binding and release mechanisms.
Protein Sci., 31, 2022

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