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437D
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BU of 437d by Molmil
CRYSTAL STRUCTURE OF AN RNA PSEUDOKNOT FROM BEET WESTERN YELLOW VIRUS INVOLVED IN RIBOSOMAL FRAMESHIFTING
Descriptor: MAGNESIUM ION, RNA PSEUDOKNOT, SODIUM ION
Authors:Su, L, Chen, L, Egli, M, Berger, J.M, Rich, A.
Deposit date:1998-11-24
Release date:1998-12-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot.
Nat.Struct.Biol., 6, 1999
6FV5
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BU of 6fv5 by Molmil
QTRT2, the non-catalytic subunit of murine tRNA-Guanine Transglycosylase
Descriptor: DI(HYDROXYETHYL)ETHER, MALONATE ION, Queuine tRNA-ribosyltransferase accessory subunit 2, ...
Authors:Behrens, C, Heine, A, Reuter, K.
Deposit date:2018-03-01
Release date:2018-06-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.179 Å)
Cite:Homodimer Architecture of QTRT2, the Noncatalytic Subunit of the Eukaryotic tRNA-Guanine Transglycosylase.
Biochemistry, 57, 2018
8J9S
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BU of 8j9s by Molmil
leucine zipper complex of AIMP1 and AIMP2
Descriptor: Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, Aminoacyl tRNA synthase complex-interacting multifunctional protein 2, IODIDE ION
Authors:Kim, D.K, Kang, B.S.
Deposit date:2023-05-04
Release date:2024-05-08
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Assembly of human multi-tRNA synthetase complex through leucine zipper motifs
To Be Published
2RP0
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BU of 2rp0 by Molmil
Refined solution structure of the PEMV-1 mRNA pseudoknot, 28 lowest energy structures
Descriptor: PEMV-1 mRNA pseudoknot
Authors:Cornish, P.V, Hennig, M, Giedroc, D.P.
Deposit date:2008-04-25
Release date:2009-03-31
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Frameshifting RNA pseudoknots: Structure and mechanism.
Virus Res., 139, 2009
2RP1
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BU of 2rp1 by Molmil
Refined solution structure of the PEMV-1 mRNA pseudoknot, regularized average structure
Descriptor: PEMV-1 mRNA pseudoknot
Authors:Cornish, P.V, Hennig, M, Giedroc, D.P.
Deposit date:2008-04-25
Release date:2009-03-31
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Frameshifting RNA pseudoknots: Structure and mechanism.
Virus Res., 139, 2009
2PI5
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BU of 2pi5 by Molmil
T7 RNA polymerase complexed with a phi10 promoter
Descriptor: 5'-D(*CP*TP*TP*C*CP*TP*AP*TP*AP*GP*TP*GP*AP*GP*TP*CP*GP*TP*AP*TP*TP*A)-3', 5'-D(*TP*AP*AP*TP*AP*CP*GP*AP*CP*TP*CP*AP*CP*T)-3', DNA-directed RNA polymerase
Authors:Kennedy, W.P, Momand, J.R, Yin, Y.W.
Deposit date:2007-04-12
Release date:2007-06-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mechanism for de novo RNA synthesis and initiating nucleotide specificity by t7 RNA polymerase.
J.Mol.Biol., 370, 2007
5UF3
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BU of 5uf3 by Molmil
Structure Effects of the Four-Adenine Loop of the Coliphage GA Replicase RNA Operator
Descriptor: phage GA operator RNA hairpin
Authors:Chang, A.T, Tran, M, DeJong, E, Nikonowicz, E.P.
Deposit date:2017-01-03
Release date:2017-05-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and Dynamics of the Tetra-A Loop and (A-A)-U Sequence Motif within the Coliphage GA Replicase RNA Operator.
Biochemistry, 56, 2017
1LNT
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BU of 1lnt by Molmil
Crystal Structure of the Highly Conserved RNA Internal Loop of SRP
Descriptor: 5'-R(*CP*GP*GP*AP*AP*GP*CP*AP*GP*(CBV)P*GP*C)-3', 5'-R(*GP*CP*GP*UP*CP*AP*GP*GP*UP*CP*(CBV)P*G)-3', CALCIUM ION, ...
Authors:Deng, J, Xiong, Y, Pan, B, Sundaralingam, M.
Deposit date:2002-05-03
Release date:2003-06-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of an RNA dodecamer containing a fragment from SRP domain IV of Escherichia coli.
Acta Crystallogr.,Sect.D, 59, 2003
2QH3
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BU of 2qh3 by Molmil
Solution structure of the U64 H/ACA snoRNA 3' terminal hairpin loop
Descriptor: Human U64 H/ACA snoRNA
Authors:Feigon, J, Theimer, C.A, Chim, N, Breece, K.E.
Deposit date:2007-06-29
Release date:2007-09-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural and functional characterization of human telomerase RNA processing and cajal body localization signals.
Mol.Cell, 27, 2007
2PO4
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BU of 2po4 by Molmil
X-ray crystal structure of polymerase domain of the bacteriophage N4 virion RNA polymerase
Descriptor: Virion RNA polymerase
Authors:Murakami, K.S, Davydova, E.K, Rothman-Denes, L.B.
Deposit date:2007-04-25
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystal structure of polymerase domain of the bacteriophage N4 virion RNA polymerase
Proc.Natl.Acad.Sci.USA, 15, 2008
1K9W
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BU of 1k9w by Molmil
HIV-1(MAL) RNA Dimerization Initiation Site
Descriptor: HIV-1 DIS(Mal)UU RNA, MAGNESIUM ION
Authors:Ennifar, E, Walter, P, Ehresmann, B, Ehresmann, C, Dumas, P.
Deposit date:2001-10-31
Release date:2001-11-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structures of coaxially stacked kissing complexes of the HIV-1 RNA dimerization initiation site.
Nat.Struct.Biol., 8, 2001
2LWK
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BU of 2lwk by Molmil
Solution structure of small molecule-influenza RNA complex
Descriptor: 6,7-dimethoxy-2-(piperazin-1-yl)quinazolin-4-amine, RNA (32-MER)
Authors:Lee, M.-K, Varani, G, Choi, B.-S, Pellecchia, M, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-08-01
Release date:2012-08-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A novel small-molecule binds to the influenza A virus RNA promoter and inhibits viral replication.
Chem.Commun.(Camb.), 50, 2014
7BXY
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BU of 7bxy by Molmil
mRNA interferase from Bacillus cereus
Descriptor: mRNA interferase
Authors:Kang, S.M.
Deposit date:2020-04-21
Release date:2021-04-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:mRNA interferase from Bacillus cereus
To Be Published
1O15
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BU of 1o15 by Molmil
THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, REGULARIZED MEAN STRUCTURE, REFINEMENT WITH TORSION ANGLE AND BASE-BASE POSITIONAL DATABASE POTENTIALS AND DIPOLAR COUPLINGS
Descriptor: THEOPHYLLINE, THEOPHYLLINE-BINDING RNA
Authors:Clore, G.M, Kuszewski, J.
Deposit date:2002-10-21
Release date:2003-02-18
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Improving the Accuracy of NMR Structures of RNA by Means of Conformational Database Potentials of Mean Force as Assessed by Complete Dipolar Coupling Cross-Validation
J.Am.Chem.Soc., 125, 2003
2QH2
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BU of 2qh2 by Molmil
Solution structure of the CR7 terminal hairpin loop from human telomerase RNA
Descriptor: Human telomerase RNA CR7 terminal hairpin loop
Authors:Feigon, J, Theimer, C.A, Chim, N, Breece, K.E.
Deposit date:2007-06-29
Release date:2007-09-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural and functional characterization of human telomerase RNA processing and cajal body localization signals.
Mol.Cell, 27, 2007
6BY4
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BU of 6by4 by Molmil
Single-State 14-mer UUCG Tetraloop calculated from Exact NOEs
Descriptor: RNA (5'-R(P*GP*GP*CP*AP*CP*UP*UP*CP*GP*GP*UP*GP*CP*C)-3')
Authors:Nichols, P.J, Henen, M.A, Born, A, Strotz, D, Guntert, P, Vogeli, B.
Deposit date:2017-12-19
Release date:2018-06-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:High-resolution small RNA structures from exact nuclear Overhauser enhancement measurements without additional restraints.
Commun Biol, 1, 2018
6BY5
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BU of 6by5 by Molmil
Two-State 14-mer UUCG Tetraloop calculated from Exact NOEs (State one: Conformers 1-5, State Two: Conformers 6-10)
Descriptor: RNA (5'-R(P*GP*GP*CP*AP*CP*UP*UP*CP*GP*GP*UP*GP*CP*C)-3')
Authors:Nichols, P.J, Henen, M.A, Born, A, Strotz, D, Guntert, P, Vogeli, B.
Deposit date:2017-12-19
Release date:2018-06-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:High-resolution small RNA structures from exact nuclear Overhauser enhancement measurements without additional restraints.
Commun Biol, 1, 2018
2PL3
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BU of 2pl3 by Molmil
Human DEAD-box RNA helicase DDX10, DEAD domain in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ETHANOL, MAGNESIUM ION, ...
Authors:Karlberg, T, Lehtio, L, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hallberg, B.M, Hammarstrom, M, Johansson, I, Kallas, A, Kotenyova, T, Moche, M, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
Deposit date:2007-04-19
Release date:2007-05-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Comparative Structural Analysis of Human DEAD-Box RNA Helicases.
Plos One, 5, 2010
4KGM
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BU of 4kgm by Molmil
Bacterial tRNA(HIS) Guanylyltransferase (Thg1)-Like Protein in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Hyde, S.J, Rao, B.S, Eckenroth, B.E, Jackman, J.E, Doublie, S.
Deposit date:2013-04-29
Release date:2013-08-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.361 Å)
Cite:Structural Studies of a Bacterial tRNA(HIS) Guanylyltransferase (Thg1)-Like Protein, with Nucleotide in the Activation and Nucleotidyl Transfer Sites.
Plos One, 8, 2013
4FNJ
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BU of 4fnj by Molmil
Utilizing the GAAA tetraloop/receptor to facilitate crystal packing and structure determination of a CUG RNA helix
Descriptor: MAGNESIUM ION, RNA (35-MER)
Authors:Coonrod, L.A, Lohman, J.R, Berglund, J.A.
Deposit date:2012-06-19
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Utilizing the GAAA Tetraloop/Receptor To Facilitate Crystal Packing and Determination of the Structure of a CUG RNA Helix.
Biochemistry, 51, 2012
4KGK
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BU of 4kgk by Molmil
Bacterial tRNA(HIS) Guanylyltransferase (Thg1)-Like Protein in complex with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Thg1-like uncharacterized protein
Authors:Hyde, S.J, Rao, B.S, Eckenroth, B.E, Jackman, J.E, Doublie, S.
Deposit date:2013-04-29
Release date:2013-08-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural Studies of a Bacterial tRNA(HIS) Guanylyltransferase (Thg1)-Like Protein, with Nucleotide in the Activation and Nucleotidyl Transfer Sites.
Plos One, 8, 2013
2P6N
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BU of 2p6n by Molmil
Human DEAD-box RNA helicase DDX41, helicase domain
Descriptor: ATP-dependent RNA helicase DDX41
Authors:Karlberg, T, Ogg, D, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hallberg, B.M, Hammarstrom, M, Johansson, I, Kotenyova, T, Lehtio, L, Moche, M, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
Deposit date:2007-03-19
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Comparative Structural Analysis of Human DEAD-Box RNA Helicases.
Plos One, 5, 2010
5ZY9
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BU of 5zy9 by Molmil
Structural basis for a tRNA synthetase
Descriptor: (1R,2R)-2-[(2S,4E,6E,8R,9S,11R,13S,15S,16S)-7-cyano-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxooxacyclooctadeca-4,6-dien-2-yl]cyclopentanecarboxylic acid, Threonyl-tRNA synthase, ZINC ION
Authors:Zhang, J.
Deposit date:2018-05-23
Release date:2019-06-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for inhibition of translational functions on a tRNA synthetase
To Be Published
8SLF
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BU of 8slf by Molmil
Crystal Structure of Glycine tRNA ligase from Mycobacterium thermoresistibile (AMP bound)
Descriptor: ADENOSINE MONOPHOSPHATE, Glycine--tRNA ligase, MAGNESIUM ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-04-21
Release date:2023-05-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of Glycine tRNA ligase from Mycobacterium thermoresistibile (AMP bound)
To be published
8SLG
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BU of 8slg by Molmil
Crystal Structure of Glycine tRNA ligase from Mycobacterium thermoresistibile (glycyl adenylate bound)
Descriptor: 5'-O-(glycylsulfamoyl)adenosine, GLYCEROL, Glycine--tRNA ligase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-04-21
Release date:2023-05-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of Glycine tRNA ligase from Mycobacterium thermoresistibile (glycyl adenylate bound)
To be published

222415

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