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4DT2
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BU of 4dt2 by Molmil
Crystal structure of red kidney bean purple acid phosphatase in complex with Maybridge fragment CC27209
Descriptor: (2,2-dimethyl-2,3-dihydro-1-benzofuran-7-yl)methanol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Feder, D, Hussein, W.M, Clayton, D.J, Kan, M, Schenk, G, McGeary, R.P, Guddat, L.W.
Deposit date:2012-02-20
Release date:2012-09-19
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Identification of purple acid phosphatase inhibitors by fragment-based screening: promising new leads for osteoporosis therapeutics.
Chem.Biol.Drug Des., 80, 2012
7JT1
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BU of 7jt1 by Molmil
70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Carbone, C.E, Korostelev, A.A.
Deposit date:2020-08-16
Release date:2020-11-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:ArfB can displace mRNA to rescue stalled ribosomes
Nat Commun, 11, 2020
5HL6
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BU of 5hl6 by Molmil
Crystal Structure of a Putative GAF sensor protein from Burkholderia vietnamiensis
Descriptor: 1,2-ETHANEDIOL, Putative GAF sensor protein
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-01-14
Release date:2016-01-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8499 Å)
Cite:Crystal Structure of a Putative GAF sensor protein from Burkholderia vietnamiensis
to be published
5WTC
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BU of 5wtc by Molmil
Structure of human PARP1 catalytic domain bound to a quinazoline-2,4(1H,3H)-dione inhibitor
Descriptor: 1-[[4-fluoranyl-3-[4-[2,2,2-tris(fluoranyl)ethyl]piperazin-1-yl]carbonyl-phenyl]methyl]quinazoline-2,4-dione, Poly [ADP-ribose] polymerase 1
Authors:Cao, R, Wang, Y.L, Zhou, J, Huang, N, Xu, B.L.
Deposit date:2016-12-11
Release date:2017-01-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of human PARP1 catalytic domain bound to a quinazoline-2,4(1H,3H)-dione inhibitor
To Be Published
9HCP
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BU of 9hcp by Molmil
Crystal structure of human TRF1 TRFH domain in complex with compound 15
Descriptor: 1,2-ETHANEDIOL, 2-(difluoromethoxy)benzene-1-sulfonamide, CALCIUM ION, ...
Authors:Casale, G, Le Bihan, Y.-V, Van Montfort, R.L.M, Guettler, S.
Deposit date:2024-11-11
Release date:2025-11-19
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of first-in-class inhibitors of the TRF1-TIN2 protein-protein interaction by fragment screening
To Be Published
6D6B
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BU of 6d6b by Molmil
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 11
Descriptor: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 2-nitrobenzoate, Transcriptional activator protein LasR
Authors:Dong, S.H, Nair, S.K.
Deposit date:2018-04-20
Release date:2018-08-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
6DB8
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BU of 6db8 by Molmil
Structural basis for promiscuous binding and activation of fluorogenic dyes by DIR2s RNA aptamer
Descriptor: 2-[(Z)-(3-methyl-1,3-benzoxazol-2(3H)-ylidene)methyl]-3-(3-sulfopropyl)-1,3-benzothiazol-3-ium, Fab-Heavy chain, Fab-Light chain, ...
Authors:Shao, Y, Shelke, S.A, Laski, A, Piccirilli, J.A.
Deposit date:2018-05-02
Release date:2018-11-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.86541343 Å)
Cite:Structural basis for activation of fluorogenic dyes by an RNA aptamer lacking a G-quadruplex motif.
Nat Commun, 9, 2018
4XE0
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BU of 4xe0 by Molmil
Idelalisib bound to the p110 subunit of PI3K delta
Descriptor: 5-fluoro-3-phenyl-2-[(1S)-1-(7H-purin-6-ylamino)propyl]quinazolin-4(3H)-one, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform
Authors:Somoza, J.R, Villasenor, A.
Deposit date:2014-12-20
Release date:2015-02-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.434 Å)
Cite:Structural, Biochemical, and Biophysical Characterization of Idelalisib Binding to Phosphoinositide 3-Kinase delta.
J.Biol.Chem., 290, 2015
9HCW
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BU of 9hcw by Molmil
Crystal structure of human TRF1 TRFH domain in complex with compound 52
Descriptor: 1-(methylsulfonylamino)cyclohexane-1-carboxylic acid, Telomeric repeat-binding factor 1
Authors:Casale, G, Le Bihan, Y.-V, van Montfort, R.L.M, Guettler, S.
Deposit date:2024-11-11
Release date:2025-11-19
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Discovery of first-in-class inhibitors of the TRF1-TIN2 protein-protein interaction by fragment screening
To Be Published
5AD3
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BU of 5ad3 by Molmil
Bivalent binding to BET bromodomains
Descriptor: 3-methoxy-N-[2-[4-[1-(3-methoxy-[1,2,4]triazolo[4,3-b]pyridazin-6-yl)-4-piperidyl]phenoxy]ethyl]-N-methyl-[1,2,4]triazolo[4,3-b]pyridazin-6-amine, BROMODOMAIN-CONTAINING PROTEIN 4
Authors:Waring, M.J, Chen, H, Rabow, A.A, Walker, G, Bobby, R, Boiko, S, Bradbury, R.H, Callis, R, Dale, I, Daniels, D, Flavell, L, Holdgate, G, Jowitt, T.A, Kikhney, A, McAlister, M, Ogg, D, Patel, J, Petteruti, P, Robb, G.R, Robers, M, Stratton, N, Svergun, D.I, Wang, W, Whittaker, D.
Deposit date:2015-08-19
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Potent and Selective Bivalent Inhibitors of Bet Bromodomains
Nat.Chem.Biol., 12, 2016
6D6C
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BU of 6d6c by Molmil
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 12
Descriptor: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 2-methoxybenzoate, HISTIDINE, Transcriptional activator protein LasR
Authors:Dong, S.H, Nair, S.K.
Deposit date:2018-04-20
Release date:2018-08-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
7AM0
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BU of 7am0 by Molmil
GqqA- a novel type of quorum quenching acylases
Descriptor: PHENYLALANINE, Prephenate dehydratase
Authors:Werner, N, Betzel, C.
Deposit date:2020-10-07
Release date:2021-08-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Komagataeibacter europaeus GqqA is the prototype of a novel bifunctional N-Acyl-homoserine lactone acylase with prephenate dehydratase activity.
Sci Rep, 11, 2021
7T91
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BU of 7t91 by Molmil
Crystal structure of Zinc finger motif 1 and 2 of GLI1 DNA binding region
Descriptor: Isoform 2 of Zinc finger protein GLI1, ZINC ION
Authors:Wu, M, Zhang, S, Augelli-Szanfran, C.E, Boohaker, R.J.
Deposit date:2021-12-17
Release date:2022-12-21
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure Characterization of Zinc Finger Motif 1 and 2 of GLI1 DNA Binding Region
Int J Mol Sci, 25, 2024
7DSX
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BU of 7dsx by Molmil
Structure of a human NHE1-CHP1 complex under pH 7.5, bound by cariporide
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, Calcineurin B homologous protein 1, N-[bis(azanyl)methylidene]-3-methylsulfonyl-4-propan-2-yl-benzamide, ...
Authors:Dong, Y, Gao, Y, Li, B, Zhang, X.C, Zhao, Y.
Deposit date:2021-01-03
Release date:2021-06-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and mechanism of the human NHE1-CHP1 complex.
Nat Commun, 12, 2021
7SU6
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BU of 7su6 by Molmil
DIHYDRONEOPTERIN ALDOLASE (DHNA) Lys98Ala FROM YERSINIA PESTIS CO-CRYSTALLIZED with 7,8-dihydroneopterin
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-7,8-DIHYDRO-6-(1,2,3-TRIHYDROXYPROPYL)-4(1H)-PTERIDINONE, 7,8-dihydroneopterin aldolase
Authors:Bourne, C.R.
Deposit date:2021-11-16
Release date:2022-12-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:DIHYDRONEOPTERIN ALDOLASE (DHNA) Lys98Ala FROM YERSINIA PESTIS CO-CRYSTALLIZED with 7,8-dihydroneopterin
To Be Published
7SU7
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BU of 7su7 by Molmil
Dihydroneopterin aldolase (DHNA) from Yersinia pestis co-crystallized with product
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-AMINO-6-HYDROXYMETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE, ...
Authors:Bourne, C.R.
Deposit date:2021-11-16
Release date:2022-12-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Dihydroneopterin aldolase (DHNA) from Yersinia pestis co-crystallized with product
To Be Published
2V35
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BU of 2v35 by Molmil
Porcine Pancreatic Elastase in complex with inhibitor JM54
Descriptor: (2R)-3-{[(BENZYLAMINO)CARBONYL]AMINO}-2-HYDROXYPROPANOIC ACID, ELASTASE-1, GLYCEROL, ...
Authors:Oliveira, T.F, Mulchande, J, Martins, L, Moreira, R, Iley, J, Archer, M.
Deposit date:2007-06-12
Release date:2008-06-24
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The Efficiency of C-4 Substituents in Activating the Beta-Lactam Scaffold Towards Serine Proteases and Hydroxide Ion.
Org.Biomol.Chem., 5, 2007
4BAL
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BU of 4bal by Molmil
Thaumatin from Thaumatococcus daniellii structure in complex with the europium tris-hydroxymethyltriazoledipicolinate complex at 1.30 A resolution.
Descriptor: 4-(4-(hydroxymethyl)-1h-1,2,3-triazol-1-yl)pyridine-2,6-dicarboxylic acid, EUROPIUM (III) ION, THAUMATIN-1
Authors:Talon, R, Kahn, R, Gautier, A, Nauton, L, Girard, E.
Deposit date:2012-09-14
Release date:2012-11-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.298 Å)
Cite:Clicked Europium Dipicolinate Complexes for Protein X-Ray Structure Determination.
Chem.Commun.(Camb.), 48, 2012
7T4I
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BU of 7t4i by Molmil
Crystal Structure of wild type EGFR in complex with TAK-788
Descriptor: Epidermal growth factor receptor, propan-2-yl 2-[[4-[2-(dimethylamino)ethyl-methyl-amino]-2-methoxy-5-(propanoylamino)phenyl]amino]-4-(1-methylindol-3-yl)pyrimidine-5-carboxylate
Authors:Skene, R.J, Lane, W.
Deposit date:2021-12-10
Release date:2022-12-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Discovery of mobocertinib, a potent, oral inhibitor of EGFR exon 20 insertion mutations in non-small cell lung cancer.
Bioorg.Med.Chem.Lett., 80, 2022
4MC3
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BU of 4mc3 by Molmil
Hedycaryol synthase in complex with Nerolidol
Descriptor: (3R,6E)-3,7,11-trimethyldodeca-1,6,10-trien-3-ol, Putative sesquiterpene cyclase
Authors:Baer, P, Rabe, P, Cirton, C, Oliveira Mann, C, Kaufmann, N, Groll, M, Dickschat, J.
Deposit date:2013-08-21
Release date:2014-01-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Hedycaryol synthase in complex with nerolidol reveals terpene cyclase mechanism.
Chembiochem, 15, 2014
6T1O
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BU of 6t1o by Molmil
Crystal structure of MLLT1 (ENL) YEATS domain in complexed with benzimidazole-amide derivative 6
Descriptor: 1,2-ETHANEDIOL, 4-iodanyl-~{N}-[2-(piperidin-1-ylmethyl)-3~{H}-benzimidazol-5-yl]benzamide, Protein ENL
Authors:Chaikuad, A, Heidenreich, D, Moustakim, M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Fedorov, O, Brennan, P.E, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2019-10-04
Release date:2019-11-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insights into Interaction Mechanisms of Alternative Piperazine-urea YEATS Domain Binders in MLLT1.
Acs Med.Chem.Lett., 10, 2019
9KMF
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BU of 9kmf by Molmil
The Crystal Structure of dsPETase01 from Biortus
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha/beta hydrolase, ...
Authors:Wan, T, Wang, F, Lv, Z, Lin, D, Pan, W, Shang, H, Sun, J.
Deposit date:2024-11-16
Release date:2025-11-19
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Crystal Structure of dsPETase01 from Biortus
To Be Published
9FVG
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BU of 9fvg by Molmil
Crystal structure of 14-3-3 sigma in complex with Tau pS214 peptide and covalent stabilizer AO184
Descriptor: 1-(3-bromanyl-4-methyl-phenyl)-2-(4-ethylphenyl)imidazole, 14-3-3 protein sigma, Microtubule-associated protein tau
Authors:van den Oetelaar, M.C.M, Scheele, J.J.A, Ottmann, C, Brunsveld, L.
Deposit date:2024-06-27
Release date:2025-07-09
Last modified:2025-07-16
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Site-selective stabilization of the 14-3-3/tau protein-protein interaction
To Be Published
4XNE
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BU of 4xne by Molmil
Crystal structure of ERK2 in complex with an inhibitor
Descriptor: 1-phenyl-1H-1,2,4-triazole-3,5-diamine, Mitogen-activated protein kinase 1, SULFATE ION
Authors:Gelin, M, Allemand, F, Labesse, G, Guichou, J.F.
Deposit date:2015-01-15
Release date:2015-08-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Combining `dry' co-crystallization and in situ diffraction to facilitate ligand screening by X-ray crystallography.
Acta Crystallogr.,Sect.D, 71, 2015
1ZLX
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BU of 1zlx by Molmil
The apo structure of human glycinamide ribonucleotide transformylase
Descriptor: GLYCEROL, Phosphoribosylglycinamide formyltransferase
Authors:Dahms, T.E, Sainz, G, Giroux, E.L, Caperelli, C.A, Smith, J.L.
Deposit date:2005-05-09
Release date:2005-08-23
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The apo and ternary complex structures of a chemotherapeutic target: human glycinamide ribonucleotide transformylase.
Biochemistry, 44, 2005

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