PDB: 41454 resultsInfo pagesStatus searchChemie searchBIRD

---

1ORO	A FLEXIBLE LOOP AT THE DIMER INTERFACE IS A PART OF THE ACTIVE SITE OF THE ADJACENT MONOMER OF ESCHERICHIA COLI OROTATE PHOSPHORIBOSYLTRANSFERASE Descriptor: OROTATE PHOSPHORIBOSYLTRANSFERASE, SULFATE ION Authors: Henriksen, A, Aghajari, N, Jensen, K.F, Gajhede, M. Deposit date: 1995-09-11 Release date: 1996-04-03 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.4 Å) Cite: A flexible loop at the dimer interface is a part of the active site of the adjacent monomer of Escherichia coli orotate phosphoribosyltransferase. Biochemistry, 35, 1996
8CEF	Asymmetric Dimerization in a Transcription Factor Superfamily is Promoted by Allosteric Interactions with DNA Descriptor: DNA (26-MER), Nuclear receptor DNA binding domain, ZINC ION Authors: Patel, A.K.M, Shaik, T.B, McEwen, A.G, Moras, D, Klaholz, B.P, Billas, I.M.L. Deposit date: 2023-02-01 Release date: 2023-08-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.486 Å) Cite: Asymmetric dimerization in a transcription factor superfamily is promoted by allosteric interactions with DNA. Nucleic Acids Res., 51, 2023
3CXH	Structure of yeast complex III with isoform-2 cytochrome c bound and definition of a minimal core interface for electron transfer. Descriptor: (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate, (1R)-2-(phosphonooxy)-1-[(tridecanoyloxy)methyl]ethyl pentadecanoate, (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(heptanoyloxy)methyl]ethyl octadecanoate, ... Authors: Solmaz, S.R.N, Hunte, C. Deposit date: 2008-04-24 Release date: 2008-05-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structure of complex III with bound cytochrome c in reduced state and definition of a minimal core interface for electron transfer. J.Biol.Chem., 283, 2008
3CX5	Structure of complex III with bound cytochrome c in reduced state and definition of a minimal core interface for electron transfer. Descriptor: (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate, (1R)-2-(phosphonooxy)-1-[(tridecanoyloxy)methyl]ethyl pentadecanoate, (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(heptanoyloxy)methyl]ethyl octadecanoate, ... Authors: Solmaz, S.R.N, Hunte, C. Deposit date: 2008-04-23 Release date: 2008-05-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structure of complex III with bound cytochrome c in reduced state and definition of a minimal core interface for electron transfer. J.Biol.Chem., 283, 2008
4B4N	CPSF6 defines a conserved capsid interface that modulates HIV-1 replication Descriptor: CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6, GAG PROTEIN Authors: Price, A.J, James, L.C. Deposit date: 2012-07-31 Release date: 2012-09-19 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.813 Å) Cite: Cpsf6 Defines a Conserved Capsid Interface that Modulates HIV-1 Replication. Plos Pathog., 8, 2012
3SXU	Structure of the E. coli SSB-DNA polymerase III interface Descriptor: DNA polymerase III subunit chi, DNA polymerase III subunit psi, SSB peptide Authors: Marceau, A.H, Keck, J.L. Deposit date: 2011-07-15 Release date: 2011-09-21 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structure of the SSB-DNA polymerase III interface and its role in DNA replication. Embo J., 30, 2011
8BFY	ABC transporter binding protein CebE from Streptomyces scabiei in complex with cellotriose Descriptor: CITRIC ACID, GLYCEROL, Putative secreted cellobiose-binding (Transport system associated), ... Authors: Rigali, S, Jourdan, S, Kerff, F. Deposit date: 2022-10-27 Release date: 2023-02-01 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Common scab disease: structural basis of elicitor recognition in pathogenic Streptomyces species. Microbiol Spectr, 11, 2023
4TGL	CATALYSIS AT THE INTERFACE: THE ANATOMY OF A CONFORMATIONAL CHANGE IN A TRIGLYCERIDE LIPASE Descriptor: DIETHYL PHOSPHONATE, TRIACYL-GLYCEROL ACYLHYDROLASE Authors: Derewenda, U, Brzozowski, A.M, Lawson, D, Derewenda, Z.S. Deposit date: 1991-07-29 Release date: 1993-07-15 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Catalysis at the interface: the anatomy of a conformational change in a triglyceride lipase. Biochemistry, 31, 1992
3LDA	Yeast Rad51 H352Y Filament Interface Mutant Descriptor: CHLORIDE ION, DNA repair protein RAD51 Authors: Villanueva, N.L, Chen, J, Morrical, S.W, Rould, M.A. Deposit date: 2010-01-12 Release date: 2010-04-21 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Insights into the mechanism of Rad51 recombinase from the structure and properties of a filament interface mutant. Nucleic Acids Res., 38, 2010
1N0J	The Structure of Human Mitochondrial MN3+ Superoxide Dismutase Reveals a Novel Tetrameric Interface of Two 4-Helix Bundles Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn] Authors: Borgstahl, G.E.O, Parge, H.E, Tainer, J.A. Deposit date: 2002-10-14 Release date: 2002-11-06 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.2 Å) Cite: The Structure of Human Mitochondrial Mn3+ Superoxide Dismutase Reveals a Novel Tetrameric Interface of Two 4-Helix Bundles Cell(Cambridge,Mass.), 71, 1992
4LC5	Structural basis of substrate specificity of CDA superfamily guanine deaminase Descriptor: 1,2-ETHANEDIOL, 9-METHYLGUANINE, Cytidine and deoxycytidylate deaminase zinc-binding region, ... Authors: Bitra, A, Biswas, A, Anand, R. Deposit date: 2013-06-21 Release date: 2014-01-22 Method: X-RAY DIFFRACTION (1.97 Å) Cite: Structural basis of the substrate specificity of cytidine deaminase superfamily Guanine deaminase Biochemistry, 52, 2013
1R9F	Crystal structure of p19 complexed with 19-bp small interfering RNA Descriptor: 5'-R(*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*AP*UP*U)-3', 5'-R(*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3', Core protein P19, ... Authors: Ye, K, Malinina, L, Patel, D.J. Deposit date: 2003-10-28 Release date: 2004-01-27 Last modified: 2021-10-27 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Recognition of small interfering RNA by a viral suppressor of RNA Nature, 426, 2003
5UK0	CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 2 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ... Authors: Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N. Deposit date: 2017-01-19 Release date: 2017-05-31 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (4.8 Å) Cite: CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface. J. Mol. Biol., 429, 2017
3M79	A tetrameric Zn-bound cytochrome cb562 complex with covalently and non-covalently stabilized interfaces crystallized in the presence of Cu(II) and Zn(II) Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Soluble cytochrome b562, ZINC ION Authors: Brodin, J.D, Tezcan, F.A. Deposit date: 2010-03-16 Release date: 2010-06-16 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Evolution of metal selectivity in templated protein interfaces. J.Am.Chem.Soc., 132, 2010
5UK1	CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 3 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ... Authors: Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N. Deposit date: 2017-01-19 Release date: 2017-05-31 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (4.8 Å) Cite: CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface. J. Mol. Biol., 429, 2017
5UK2	CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 4 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ... Authors: Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N. Deposit date: 2017-01-19 Release date: 2017-05-31 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (4.8 Å) Cite: CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface. J. Mol. Biol., 429, 2017
5UJZ	CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 1 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ... Authors: Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N. Deposit date: 2017-01-19 Release date: 2017-05-31 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (4.8 Å) Cite: CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface. J. Mol. Biol., 429, 2017
2Q1E	Altered dimer interface decreases stability in an amyloidogenic kappa1 Bence Jones protein. Descriptor: Amyloidogenic immunoglobulin light chain protein AL-09, SULFATE ION Authors: Thompson, J.R, Ramirez-Alvarado, M, Baden, E.M. Deposit date: 2007-05-24 Release date: 2008-04-08 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Altered dimer interface decreases stability in an amyloidogenic protein. J.Biol.Chem., 283, 2008
3Q3F	Engineering Domain-Swapped Binding Interfaces by Mutually Exclusive Folding: Insertion of Ubiquitin into position 103 of Barnase Descriptor: Ribonuclease/Ubiquitin chimeric protein, SULFATE ION Authors: Ha, J.-H, Karchin, J.M, Walker-Kopp, N, Huang, L.-S, Berry, E.A, Loh, S.N. Deposit date: 2010-12-21 Release date: 2012-01-25 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.169 Å) Cite: Engineering domain-swapped binding interfaces by mutually exclusive folding. J.Mol.Biol., 416, 2012
2RBK	X-ray Crystallographic Structures Show Conservation of a Trigonal-Bipyramidal Intermediate in a Phosphoryl-transfer Superfamily. Descriptor: MAGNESIUM ION, Putative uncharacterized protein, oxido(dioxo)vanadium Authors: Lu, Z, Dunaway-Mariano, D, Allen, K.N. Deposit date: 2007-09-19 Release date: 2008-04-22 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1 Å) Cite: The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state. Proc.Natl.Acad.Sci.Usa, 105, 2008
5C3C	Structural characterization of a newly identified component of alpha-carboxysomes: The AAA+ domain Protein cso-CbbQ Descriptor: ADENOSINE-5'-DIPHOSPHATE, CbbQ/NirQ/NorQ domain protein Authors: Sutter, M, Kerfeld, C.A. Deposit date: 2015-06-17 Release date: 2015-11-18 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural Characterization of a Newly Identified Component of alpha-Carboxysomes: The AAA+ Domain Protein CsoCbbQ. Sci Rep, 5, 2015
1UR5	Stabilization of a Tetrameric Malate Dehydrogenase by Introduction of a Disulfide Bridge at the Dimer/Dimer Interface Descriptor: CADMIUM ION, CHLORIDE ION, MALATE DEHYDROGENASE, ... Authors: Bjork, A, Dalhus, B, Mantzilas, D, Eijsink, V.G.H, Sirevag, R. Deposit date: 2003-10-27 Release date: 2003-11-05 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Stabilization of a Tetrameric Malate Dehydrogenase by Introduction of a Disulfide Bridge at the Dimer-Dimer Interface J.Mol.Biol., 334, 2003
2RB5	X-ray Crystallographic Structures Show Conservation of a Trigonal-Bipyramidal Intermediate in a Phosphoryl-transfer Superfamily. Descriptor: MAGNESIUM ION, Putative uncharacterized protein, trioxido(oxo)tungsten Authors: Lu, Z, Dunaway-Mariano, D, Allen, K.N. Deposit date: 2007-09-18 Release date: 2008-04-22 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.03 Å) Cite: The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state. Proc.Natl.Acad.Sci.Usa, 105, 2008
2RAR	X-ray Crystallographic Structures Show Conservation of a Trigonal-Bipyramidal Intermediate in a Phosphoryl-transfer Superfamily. Descriptor: MAGNESIUM ION, Putative uncharacterized protein, oxido(dioxo)vanadium Authors: Lu, Z, Dunaway-Mariano, D, Allen, K.N. Deposit date: 2007-09-17 Release date: 2008-04-22 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.52 Å) Cite: The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state. Proc.Natl.Acad.Sci.Usa, 105, 2008
2RAV	X-ray Crystallographic Structures Show Conservation of a Trigonal-Bipyramidal Intermediate in a Phosphoryl-transfer Superfamily. Descriptor: MAGNESIUM ION, Putative uncharacterized protein, trioxido(oxo)tungsten Authors: Lu, Z, Dunaway-Mariano, D, Allen, K.N. Deposit date: 2007-09-17 Release date: 2008-04-22 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.07 Å) Cite: The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state. Proc.Natl.Acad.Sci.Usa, 105, 2008

<14151617181920212223242526272829>