PDB: 82203 resultsInfo pagesStatus searchChemie searchBIRD

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3U8N	Crystal structure of the acetylcholine binding protein (AChBP) from Lymnaea stagnalis in complex with NS3950 (1-(6-bromo-5-ethoxypyridin-3-yl)-1,4-diazepane) Descriptor: 1-(6-bromo-5-ethoxypyridin-3-yl)-1,4-diazepane, 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine-binding protein, ... Authors: Rohde, L.A.H, Ahring, P.K, Jensen, M.L, Nielsen, E.O, Peters, D, Helgstrand, C, Krintel, C, Harpsoe, K, Gajhede, M, Kastrup, J.S, Balle, T. Deposit date: 2011-10-17 Release date: 2011-12-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Intersubunit bridge formation governs agonist efficacy at nicotinic acetylcholine alpha 4 beta 2 receptors: unique role of halogen bonding revealed. J.Biol.Chem., 287, 2012
4K7P	Generation and Characterization of a Unique Reagent that Recognizes a Panel of Recombinant Human Monoclonal Antibody Therapeutics in the Presence of Endogenous Human IgG Descriptor: antibody 10C4 Fab fragment heavy chain, antibody 10C4 Fab fragment light chain, antibody rhumAb6 Fab fragment heavy chain, ... Authors: Eigenbrot, C, Shia, S. Deposit date: 2013-04-17 Release date: 2013-08-07 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Generation and characterization of a unique reagent that recognizes a panel of recombinant human monoclonal antibody therapeutics in the presence of endogenous human IgG. MAbs, 5, 2013
3U8M	Crystal structure of the acetylcholine binding protein (AChBP) from Lymnaea stagnalis in complex with NS3920 (1-(6-bromopyridin-3-yl)-1,4-diazepane) Descriptor: 1-(6-bromopyridin-3-yl)-1,4-diazepane, Acetylcholine-binding protein, SULFATE ION Authors: Rohde, L.A.H, Ahring, P.K, Jensen, M.L, Nielsen, E.O, Peters, D, Helgstrand, C, Krintel, C, Harpsoe, K, Gajhede, M, Kastrup, J.S, Balle, T. Deposit date: 2011-10-17 Release date: 2011-12-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Intersubunit bridge formation governs agonist efficacy at nicotinic acetylcholine alpha 4 beta 2 receptors: unique role of halogen bonding revealed. J.Biol.Chem., 287, 2012
1DTX	CRYSTAL STRUCTURE OF ALPHA-DENDROTOXIN FROM THE GREEN MAMBA VENOM AND ITS COMPARISON WITH THE STRUCTURE OF BOVINE PANCREATIC TRYPSIN INHIBITOR Descriptor: ALPHA-DENDROTOXIN, SULFATE ION Authors: Skarzynski, T. Deposit date: 1991-04-29 Release date: 1992-01-15 Last modified: 2019-12-25 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure of alpha-dendrotoxin from the green mamba venom and its comparison with the structure of bovine pancreatic trypsin inhibitor. J.Mol.Biol., 224, 1992
3U8L	Crystal structure of the acetylcholine binding protein (AChBP) from Lymnaea stagnalis in complex with NS3570 (1-(5-phenylpyridin-3-yl)-1,4-diazepane) Descriptor: 1-(5-phenylpyridin-3-yl)-1,4-diazepane, Acetylcholine-binding protein, SULFATE ION Authors: Rohde, L.A.H, Ahring, P.K, Jensen, M.L, Nielsen, E.O, Peters, D, Helgstrand, C, Krintel, C, Harpsoe, K, Gajhede, M, Kastrup, J.S, Balle, T. Deposit date: 2011-10-17 Release date: 2011-12-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.32 Å) Cite: Intersubunit bridge formation governs agonist efficacy at nicotinic acetylcholine alpha 4 beta 2 receptors: unique role of halogen bonding revealed. J.Biol.Chem., 287, 2012
4C1W	Carbohydrate binding domain from Streptococcus pneumoniae NanA sialidase complexed with 3'-sialyllactose Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, NEURAMINIDASE Authors: Yang, L, Connaris, H, Potter, J.A, Taylor, G.L. Deposit date: 2013-08-14 Release date: 2014-08-27 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.84 Å) Cite: Prevention of Influenza by Targeting Host Receptors Using Engineered Proteins. Proc.Natl.Acad.Sci.USA, 111, 2014
3U8J	Crystal structure of the acetylcholine binding protein (AChBP) from Lymnaea stagnalis in complex with NS3531 (1-(pyridin-3-yl)-1,4-diazepane) Descriptor: 1-(pyridin-3-yl)-1,4-diazepane, 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine-binding protein, ... Authors: Rohde, L.A.H, Ahring, P.K, Jensen, M.L, Nielsen, E.O, Peters, D, Helgstrand, C, Krintel, C, Harpsoe, K, Gajhede, M, Kastrup, J.S, Balle, T. Deposit date: 2011-10-17 Release date: 2011-12-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Intersubunit bridge formation governs agonist efficacy at nicotinic acetylcholine alpha 4 beta 2 receptors: unique role of halogen bonding revealed. J.Biol.Chem., 287, 2012
8A3N	Geissoschizine synthase from Catharanthus roseus - binary complex with NADP+ Descriptor: Geissoschizine synthase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ZINC ION Authors: Langley, C, Tatsis, E, Hong, B, Nakamura, Y, Kamileen, M.O, Paetz, C, Stevenson, C.E.M, Basquin, J, Lawson, D.M, Caputi, L, O'Connor, S.E. Deposit date: 2022-06-08 Release date: 2022-10-19 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2 Å) Cite: Expansion of the Catalytic Repertoire of Alcohol Dehydrogenases in Plant Metabolism. Angew.Chem.Int.Ed.Engl., 61, 2022
7PFP	Full-length cryo-EM structure of the native human uromodulin (UMOD)/Tamm-Horsfall protein (THP) filament Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Uromodulin, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Jovine, L, Xu, C, Stsiapanava, A, Carroni, M, Tunyasuvunakool, K, Jumper, J, Wu, B. Deposit date: 2021-08-11 Release date: 2022-03-16 Last modified: 2022-03-30 Method: ELECTRON MICROSCOPY (6.1 Å) Cite: Structure of the decoy module of human glycoprotein 2 and uromodulin and its interaction with bacterial adhesin FimH. Nat.Struct.Mol.Biol., 29, 2022
7Q3N	Cryo-EM of the complex between human uromodulin (UMOD)/Tamm-Horsfall protein (THP) and the FimH lectin domain from uropathogenic E. coli Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Type 1 fimbiral adhesin FimH, ... Authors: Jovine, L, Xu, C, Stsiapanava, A, Carroni, M, Tunyasuvunakool, K, Jumper, J, Wu, B. Deposit date: 2021-10-28 Release date: 2022-03-16 Last modified: 2022-03-30 Method: ELECTRON MICROSCOPY (7.4 Å) Cite: Structure of the decoy module of human glycoprotein 2 and uromodulin and its interaction with bacterial adhesin FimH. Nat.Struct.Mol.Biol., 29, 2022
3RH1	X-ray Structure of a cis-proline (P114) to alanine variant of Ribonuclease A Descriptor: CHLORIDE ION, Ribonuclease pancreatic Authors: Merlino, A, Balsamo, A, Mazzarella, L, Sica, F. Deposit date: 2011-04-11 Release date: 2012-02-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Chain termini cross-talk in the swapping process of bovine pancreatic ribonuclease. Biochimie, 94, 2012
8B1V	Dihydroprecondylocarpine acetate synthase 2 from Tabernanthe iboga Descriptor: Dihydroprecondylocarpine acetate synthase 2, ZINC ION, precondylocarpine acetate Authors: Langley, C, Basquin, J, Caputi, L, O'Connor, S.E. Deposit date: 2022-09-12 Release date: 2022-10-19 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.882 Å) Cite: Expansion of the Catalytic Repertoire of Alcohol Dehydrogenases in Plant Metabolism. Angew.Chem.Int.Ed.Engl., 61, 2022
4QFD	Co-crystal structure of compound 2 (3-(7-hydroxy-2-oxo-4-phenyl-2H-chromen-6-yl)propanoic acid) and FAD bound to human DAAO at 2.85A Descriptor: 3-(7-hydroxy-2-oxo-4-phenyl-2H-chromen-6-yl)propanoic acid, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ... Authors: Edwards, T.E, Chun, L, Arakaki, T.L. Deposit date: 2014-05-20 Release date: 2014-07-16 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Novel human D-amino acid oxidase inhibitors stabilize an active-site lid-open conformation. Biosci.Rep., 34, 2014
8B25	Dihydroprecondylocarpine acetate synthase 2 from Tabernanthe iboga - stemmadenine acetate bound structure Descriptor: 1,2-ETHANEDIOL, Dihydroprecondylocarpine acetate synthase 2, SULFATE ION, ... Authors: Langley, C, Basquin, J, Caputi, L, O'Connor, S.E. Deposit date: 2022-09-13 Release date: 2022-10-19 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.24 Å) Cite: Expansion of the Catalytic Repertoire of Alcohol Dehydrogenases in Plant Metabolism. Angew.Chem.Int.Ed.Engl., 61, 2022
8B26	Dihydroprecondylocarpine acetate synthase 2 from Tabernanthe iboga Descriptor: Dihydroprecondylocarpine acetate synthase 2, ZINC ION Authors: Langley, C, Basquin, J, Caputi, L, O'Connor, S.E. Deposit date: 2022-09-13 Release date: 2022-10-19 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.42 Å) Cite: Expansion of the Catalytic Repertoire of Alcohol Dehydrogenases in Plant Metabolism. Angew.Chem.Int.Ed.Engl., 61, 2022
8B27	Dihydroprecondylocarpine acetate synthase from Catharanthus roseus Descriptor: Dehydroprecondylocarpine acetate synthase, SULFATE ION Authors: Langley, C, Basquin, J, Caputi, L, O'Connor, S.E. Deposit date: 2022-09-13 Release date: 2022-11-02 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Expansion of the Catalytic Repertoire of Alcohol Dehydrogenases in Plant Metabolism. Angew.Chem.Int.Ed.Engl., 61, 2022
4QNP	Crystal structure of the 2009 pandemic H1N1 influenza virus neuraminidase with a neutralizing antibody Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... Authors: Wan, H.Q, Yang, H, Shore, D.A, Garten, R.J, Couzens, L, Gao, J, Jiang, L.L, Carney, P.J, Villanueva, J, Stevens, J, Eichelberger, M.C. Deposit date: 2014-06-18 Release date: 2015-02-11 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural characterization of a protective epitope spanning A(H1N1)pdm09 influenza virus neuraminidase monomers. Nat Commun, 6, 2015
3OLD	Crystal structure of alpha-amylase in complex with acarviostatin I03 Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-AMINO-4-HYDROXYMETHYL-CYCLOHEX-4-ENE-1,2,3-TRIOL, ... Authors: Qin, X, Ren, L. Deposit date: 2010-08-26 Release date: 2011-04-13 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2 Å) Cite: Structures of human pancreatic alpha-amylase in complex with acarviostatins: Implications for drug design against type II diabetes J.Struct.Biol., 174, 2011
3MLC	Crystal structure of FG41MSAD inactivated by 3-chloropropiolate Descriptor: 3-chloro-3-oxopropanoic acid, FG41 Malonate Semialdehyde Decarboxylase Authors: Guo, Y, Serrano, H, Poelarends, G.J, Johnson Jr, W.H, Hackert, M.L, Whitman, C.P. Deposit date: 2010-04-16 Release date: 2011-04-06 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.224 Å) Cite: Kinetic, Mutational, and Structural Analysis of Malonate Semialdehyde Decarboxylase from Coryneform Bacterium Strain FG41: Mechanistic Implications for the Decarboxylase and Hydratase Activities. Biochemistry, 52, 2013
3RID	X-ray structure of the C-terminal swapped dimer of P114A variant of Ribonuclease A Descriptor: 2'-DEOXYCYTIDINE-2'-DEOXYGUANOSINE-3',5'-MONOPHOSPHATE, PHOSPHATE ION, Ribonuclease pancreatic Authors: Merlino, A, Balsamo, A, Mazzarella, L, Sica, F. Deposit date: 2011-04-13 Release date: 2012-02-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.18 Å) Cite: Chain termini cross-talk in the swapping process of bovine pancreatic ribonuclease. Biochimie, 94, 2012
4RCK	Crystal Structure of Uncharacterized Membrane Spanning Protein from Vibrio fischeri Descriptor: Hypothetical membrane spanning protein, MAGNESIUM ION Authors: Kim, Y, Tesar, C, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) Deposit date: 2014-09-16 Release date: 2014-11-26 Method: X-RAY DIFFRACTION (2.999 Å) Cite: Crystal Structure of Uncharacterized Membrane Spanning Protein from Vibrio fischeri To be Published
4J50	Crystal Structure of an Expanded RNA CAG Repeat Descriptor: PHOSPHATE ION, RNA (5'-R(*UP*UP*GP*GP*GP*CP*CP*AP*GP*CP*AP*GP*CP*AP*GP*GP*UP*CP*C)-3') Authors: Park, H, Disney, M.D. Deposit date: 2013-02-07 Release date: 2013-02-20 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.65 Å) Cite: A dynamic structural model of expanded RNA CAG repeats: a refined X-ray structure and computational investigations using molecular dynamics and umbrella sampling simulations. J.Am.Chem.Soc., 135, 2013
7NT9	Trimeric SARS-CoV-2 spike ectodomain in complex with biliverdin (closed conformation) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ... Authors: Rosa, A, Pye, V.E, Nans, A, Cherepanov, P. Deposit date: 2021-03-09 Release date: 2021-04-28 Last modified: 2021-06-09 Method: ELECTRON MICROSCOPY (3.36 Å) Cite: SARS-CoV-2 can recruit a heme metabolite to evade antibody immunity. Sci Adv, 7, 2021
7NTA	Trimeric SARS-CoV-2 spike ectodomain in complex with biliverdin (one RBD erect) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ... Authors: Rosa, A, Pye, V.E, Nans, A, Cherepanov, P. Deposit date: 2021-03-09 Release date: 2021-04-28 Last modified: 2021-06-09 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: SARS-CoV-2 can recruit a heme metabolite to evade antibody immunity. Sci Adv, 7, 2021
7NTC	Trimeric SARS-CoV-2 spike ectodomain bound to P008_056 Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ... Authors: Rosa, A, Pye, V.E, Nans, A, Cherepanov, P. Deposit date: 2021-03-09 Release date: 2021-04-28 Last modified: 2021-06-09 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: SARS-CoV-2 can recruit a heme metabolite to evade antibody immunity. Sci Adv, 7, 2021

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