PDB: 224931 resultsInfo pagesStatus searchChemie searchBIRD

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2L8B	TraI (381-569) Descriptor: Protein traI Authors: Wright, N.T, Raththagala, M.U, Edwards, S, Krueger, S, Schildbach, J.F. Deposit date: 2011-01-07 Release date: 2012-01-11 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution structure and small angle scattering analysis of TraI (381-569). Proteins, 80, 2012
2L8C	NMR Spectroscopy and Molecular Dynamics Simulation of r(CCGCUGCGG)2 Reveal a Dynamic UU Internal Loop Found in Myotonic Dystrophy Type 1 - UU pair with zero hydrogen bond pairs Descriptor: RNA (5'-R(*CP*CP*GP*CP*UP*GP*CP*GP*G)-3') Authors: Parkesh, R, Fountain, M.A, Disney, M.D. Deposit date: 2011-01-07 Release date: 2011-02-23 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: NMR Spectroscopy and Molecular Dynamics Simulation of r(CCGCUGCGG)(2) Reveal a Dynamic UU Internal Loop Found in Myotonic Dystrophy Type 1. Biochemistry, 50, 2011
2L8D	Structure/function of the LBR Tudor domain Descriptor: Lamin-B receptor Authors: Liokatis, S, Edlich, C, Soupsana, K, Giannios, I, Sattler, M, Georgatos, S.D, Politou, A.S. Deposit date: 2011-01-10 Release date: 2011-11-09 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution structure and molecular interactions of lamin B receptor tudor domain. J.Biol.Chem., 287, 2012
2L8E	Solution NMR structure of FCS domain of Human Polyhomeotic Homolog 1 (HPH1) Descriptor: Polyhomeotic-like protein 1, ZINC ION Authors: Ilangovan, U, Kim, C. Deposit date: 2011-01-11 Release date: 2011-12-21 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: 1H, 15N and 13C assigned chemical shifts of FCS domain from human polyhomeotic homolog 1 To be Published
2L8F	Structure of a 4X4 Nucleotide RNA Internal Loop from an R2 Retrotransposon Descriptor: RNA (5'-R(*CP*GP*GP*AP*GP*GP*AP*CP*AP*CP*U)-3'), RNA (5'-R(*GP*UP*GP*AP*AP*GP*CP*CP*CP*GP*U)-3') Authors: Lerman, Y, Kennedy, S.D, Turner, D.H. Deposit date: 2011-01-11 Release date: 2011-08-31 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: NMR structure of a 4 x 4 nucleotide RNA internal loop from an R2 retrotransposon: Identification of a three purine-purine sheared pair motif and comparison to MC-SYM predictions. Rna, 17, 2011
2L8H	Chemical probe bound to HIV TAR RNA Descriptor: 4-methoxynaphthalen-2-amine, ARGININE, HIV TAR RNA Authors: Davidson, A, Begley, D, Lau, C, Varani, G. Deposit date: 2011-01-12 Release date: 2011-03-23 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: A Small-Molecule Probe Induces a Conformation in HIV TAR RNA Capable of Binding Drug-Like Fragments. J.Mol.Biol., 410, 2011
2L8I	A biocompatible backbone modification? - Structure and dynamics of a triazole-linked DNA duplex Descriptor: DNA (5'-D(*CP*GP*AP*CP*G*(2L8)P*TP*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*AP*AP*AP*CP*GP*TP*CP*G)-3') Authors: El-Sagheer, A, Brown, T, Ernsting, N, Dehmel, L, Griesinger, C, Mugge, C. Deposit date: 2011-01-13 Release date: 2011-12-28 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structure and Dynamics of Triazole-Linked DNA: Biocompatibility Explained. Chemistry, 17, 2011
2L8J	GABARAPL-1 NBR1-LIR complex structure Descriptor: Gamma-aminobutyric acid receptor-associated protein-like 1, NBR1-LIR peptide Authors: Rogov, V.V, Rozenknop, A, Rogova, N.Y, Loehr, F, Guentert, P, Dikic, I, Doetsch, V. Deposit date: 2011-01-17 Release date: 2011-05-11 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Characterization of the Interaction of GABARAPL-1 with the LIR Motif of NBR1. J.Mol.Biol., 410, 2011
2L8K	NMR Structure of the Arterivirus nonstructural protein 7 alpha (nsp7 alpha) Descriptor: Non-structural protein 7 Authors: Conte, M.R, Gaudin, C, Manolaridis, I, Tucker, P.W, Kelly, G. Deposit date: 2011-01-19 Release date: 2011-07-06 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structure and Genetic Analysis of the Arterivirus Nonstructural Protein 7{alpha}. J.Virol., 85, 2011
2L8L	Structure of an engineered splicing intein mutant based on Mycobacterium tuberculosis RecA Descriptor: Endonuclease PI-MtuI Authors: Du, Z, Wang, C. Deposit date: 2011-01-19 Release date: 2012-01-04 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: pK(a) coupling at the intein active site: implications for the coordination mechanism of protein splicing with a conserved aspartate. J.Am.Chem.Soc., 133, 2011
2L8M	Reduced and CO-bound cytochrome P450cam (CYP101A1) Descriptor: CAMPHOR, CARBON MONOXIDE, CHLORIDE ION, ... Authors: Pochapsky, T.C, Pochapsky, S.S, Dang, M, Asciutto, E, Madura, J. Deposit date: 2011-01-19 Release date: 2011-02-16 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Experimentally Restrained Molecular Dynamics Simulations for Characterizing the Open States of Cytochrome P450(cam). Biochemistry, 50, 2011
2L8N	NMR structure of the cytidine repressor DNA binding domain in presence of operator half-site DNA Descriptor: Transcriptional repressor CytR Authors: Moody, C.L, Tretyachenko-Ladokhina, V, Senear, D.F, Cocco, M.J. Deposit date: 2011-01-20 Release date: 2011-06-29 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Multiple Conformations of the Cytidine Repressor DNA-Binding Domain Coalesce to One upon Recognition of a Specific DNA Surface. Biochemistry, 50, 2011
2L8O	Solution structure of Chr148 from Cytophaga hutchinsonii, Northeast Structural Genomics Consortium Target Chr148 Descriptor: Activator of Hsp90 ATPase homologue 1-like C-terminal domain-containing protein Authors: Liu, Y, Lee, D, Ciccosanti, C, Nair, L, Rost, B, Acton, T, Xiao, R, Everett, J, Montelione, G, Prestegard, J, Northeast Structural Genomics Consortium (NESG) Deposit date: 2011-01-21 Release date: 2011-03-02 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution structure of Chr148 from Cytophaga hutchinsonii. Northeast Structural Genomics Consortium Target Chr148 To be Published
2L8P	Solution Structure of a DNA Duplex Containing the Potent Anti-Poxvirus Agent Cidofovir Descriptor: DNA (5'-D(*CP*GP*CP*AP*TP*GP*(L8P)P*TP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*AP*GP*CP*AP*TP*GP*CP*G)-3') Authors: Julien, O, Beadle, J.R, Magee, W.C, Chatterjee, S, Hostetler, K.Y, Evans, D.H, Sykes, B.D. Deposit date: 2011-01-22 Release date: 2011-02-23 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Solution structure of a DNA duplex containing the potent anti-poxvirus agent cidofovir. J.Am.Chem.Soc., 133, 2011
2L8Q	Solution Structure of a control DNA Duplex Descriptor: DNA (5'-D(*CP*GP*CP*AP*TP*GP*CP*TP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*AP*GP*CP*AP*TP*GP*CP*G)-3') Authors: Julien, O, Beadle, J.R, Magee, W.C, Chatterjee, S, Hostetler, K.Y, Evans, D.H, Sykes, B.D. Deposit date: 2011-01-22 Release date: 2011-02-23 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Solution structure of a DNA duplex containing the potent anti-poxvirus agent cidofovir. J.Am.Chem.Soc., 133, 2011
2L8R	Solution structure of human protein C6orf130 in complex with ADP-ribose Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Uncharacterized protein C6orf130 Authors: Lytle, B.L, Peterson, F.C, Volkman, B.F, Center for Eukaryotic Structural Genomics (CESG) Deposit date: 2011-01-22 Release date: 2011-02-23 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Orphan Macrodomain Protein (Human C6orf130) Is an O-Acyl-ADP-ribose Deacylase: SOLUTION STRUCTURE AND CATALYTIC PROPERTIES. J.Biol.Chem., 286, 2011
2L8S	Solution NMR Structure of Transmembrane and Cytosolic Regions of Integrin Alpha1 in Detergent Micelles Descriptor: Integrin alpha-1 Authors: Lai, C, Liu, X, Tian, C. Deposit date: 2011-01-24 Release date: 2012-02-01 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Integrin Alpha1 Has a Long Helix, Extending from the Transmembrane Region to the Cytoplasmic Tail in Detergent Micelles Plos One, 8, 2013
2L8T	Staphylococcus aureus pathogenicity island 1 protein gp6, an internal scaffold in size determination Descriptor: Transposon Tn557 toxic shock syndrome toxin-1 Authors: Dearborn, A.D, Spilman, M.S, Damle, P.K, Chang, J.R, Monroe, E.B, Saad, J.S, Christie, G.E, Dokland, T. Deposit date: 2011-01-24 Release date: 2011-08-17 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: The Staphylococcus aureus Pathogenicity Island 1 Protein gp6 Functions as an Internal Scaffold during Capsid Size Determination. J.Mol.Biol., 412, 2011
2L8U	NMR Spectroscopy and Molecular Dynamics Simulation of r(CCGCUGCGG)2 Reveal a Dynamic UU Internal Loop Found in Myotonic Dystrophy Type 1 - UU pair with one hydrogen bond pair Descriptor: RNA (5'-R(*CP*CP*GP*CP*UP*GP*CP*GP*G)-3') Authors: Parkesh, R, Fountain, M.A, Disney, M.D. Deposit date: 2011-01-25 Release date: 2011-02-23 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: NMR Spectroscopy and Molecular Dynamics Simulation of r(CCGCUGCGG)(2) Reveal a Dynamic UU Internal Loop Found in Myotonic Dystrophy Type 1. Biochemistry, 50, 2011
2L8V	Solution NMR structure of the phycobilisome linker polypeptide domain of CpcC (20-153) from Thermosynechococcus elongatus, Northeast Structural Genomics Consortium Target TeR219A Descriptor: Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod Authors: Ramelot, T.A, Yang, Y, Cort, J.R, Lee, D, Ciccosanti, C, Hamilton, K, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG) Deposit date: 2011-01-26 Release date: 2011-02-09 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution NMR structure of the phycobilisome linker polypeptide domain of CpcC (20-153) from Thermosynechococcus elongatus, Northeast Structural Genomics Consortium Target TeR219A To be Published
2L8W	r(CCGCUGCGG)2 UU Internal Loop Found in Myotonic Dystrophy Type 1 - UU pair with two hydrogen bond pairs Descriptor: RNA (5'-R(*CP*CP*GP*CP*UP*GP*CP*GP*G)-3') Authors: Parkesh, R, Fountain, M, Disney, M. Deposit date: 2011-01-26 Release date: 2011-02-23 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: NMR Spectroscopy and Molecular Dynamics Simulation of r(CCGCUGCGG)(2) Reveal a Dynamic UU Internal Loop Found in Myotonic Dystrophy Type 1. Biochemistry, 50, 2011
2L8X	Spatial structure of antimicrobial peptide Arenicin-2 dimer in DPC micelles Descriptor: Arenicin-2 Authors: Shenkarev, Z.O, Trunov, K.I, Paramonov, A.S, Arseniev, A.S. Deposit date: 2011-01-27 Release date: 2011-12-14 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Molecular mechanism of action of beta-hairpin antimicrobial peptide arenicin: oligomeric structure in dodecylphosphocholine micelles and pore formation in planar lipid bilayers Biochemistry, 50, 2011
2L8Y	Solution structure of the E. coli outer membrane protein RcsF (periplasmatic domain) Descriptor: Protein rcsF Authors: Rogov, V.V, Rogova, N.Y, Bernhard, F, Lohr, F, Doetsch, V. Deposit date: 2011-01-27 Release date: 2011-04-06 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: A disulfide bridge network within the soluble periplasmic domain determines structure and function of the outer membrane protein RCSF. J.Biol.Chem., 286, 2011
2L90	Solution structure of murine myristoylated msrA Descriptor: MYRISTIC ACID, Peptide methionine sulfoxide reductase Authors: Gruschus, J.M, Lim, J, Piszczek, G, Levine, R.L, Tjandra, N. Deposit date: 2011-01-27 Release date: 2012-01-11 Last modified: 2012-08-01 Method: SOLUTION NMR Cite: Characterization and solution structure of mouse myristoylated methionine sulfoxide reductase A. J.Biol.Chem., 287, 2012
2L91	Structure of the Integrin beta3 (A711P,K716A) Transmembrane Segment Descriptor: Integrin beta-3 Authors: Schmidt, T, Ulmer, T.S. Deposit date: 2011-01-27 Release date: 2011-12-21 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Basic amino-acid side chains regulate transmembrane integrin signalling. Nature, 481, 2012

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