Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1S2I
DownloadVisualize
BU of 1s2i by Molmil
Purine 2'deoxyribosyltransferase + bromopurine
Descriptor: 6-BROMO-7H-PURINE, purine trans deoxyribosylase
Authors:Anand, R, Kaminski, P.A, Ealick, S.E.
Deposit date:2004-01-08
Release date:2004-03-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structures of purine 2'-deoxyribosyltransferase, substrate complexes, and the ribosylated enzyme intermediate at 2.0 A resolution.
Biochemistry, 43, 2004
2FTC
DownloadVisualize
BU of 2ftc by Molmil
Structural Model for the Large Subunit of the Mammalian Mitochondrial Ribosome
Descriptor: 39S ribosomal protein L11, mitochondrial, 39S ribosomal protein L12, ...
Authors:Mears, J.A, Sharma, M.R, Gutell, R.R, Richardson, P.E, Agrawal, R.K, Harvey, S.C.
Deposit date:2006-01-24
Release date:2006-04-11
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (12.1 Å)
Cite:A Structural Model for the Large Subunit of the Mammalian Mitochondrial Ribosome
J.Mol.Biol., 358, 2006
1W79
DownloadVisualize
BU of 1w79 by Molmil
Crystal structure of the DD-transpeptidase-carboxypeptidase from Actinomadura R39
Descriptor: D-alanyl-D-alanine carboxypeptidase, MAGNESIUM ION, SULFATE ION
Authors:Sauvage, E, Herman, R, Petrella, S, Duez, C, Frere, J.M, Charlier, P.
Deposit date:2004-08-31
Release date:2005-06-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the Actinomadura R39 DD-peptidase reveals new domains in penicillin-binding proteins.
J. Biol. Chem., 280, 2005
1VTF
DownloadVisualize
BU of 1vtf by Molmil
STRUCTURE OF 5'-D(*(BRO)CP*GP*(BRO)CP*G)-3' IN COMPLEX WITH PROFLAVINE
Descriptor: DNA (5'-D(*(BRO)CP*GP*(BRO)CP*G)-3'), PROFLAVIN
Authors:Westhof, E, Hosur, M.V, Sundaralingam, M.
Deposit date:1988-12-13
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Nonintercalative binding of proflavin to Z-DNA: structure of a complex between d(5BrC-G-5BrC-G) and proflavin.
Biochemistry, 27, 1988
1R8U
DownloadVisualize
BU of 1r8u by Molmil
NMR structure of CBP TAZ1/CITED2 complex
Descriptor: CREB-binding protein, Cbp/p300-interacting transactivator 2, ZINC ION
Authors:De Guzman, R.N, Martinez-Yamout, M, Dyson, H.J, Wright, P.E.
Deposit date:2003-10-28
Release date:2004-03-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Interaction of the TAZ1 domain of the CREB-binding protein with the activation domain of CITED2: regulation by competition between intrinsically unstructured ligands for non-identical binding sites.
J.Biol.Chem., 279, 2004
3G1F
DownloadVisualize
BU of 3g1f by Molmil
Crystal structure of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with 5,6-dihydroorotidine 5'-monophosphate
Descriptor: 5,6-dihydroorotidine 5'-monophosphate, Orotidine 5'-phosphate decarboxylase
Authors:Fedorov, A.A, Fedorov, E.V, Chan, K.K, Gerlt, J.A, Almo, S.C.
Deposit date:2009-01-29
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanism of the orotidine 5'-monophosphate decarboxylase-catalyzed reaction: evidence for substrate destabilization.
Biochemistry, 48, 2009
1R4W
DownloadVisualize
BU of 1r4w by Molmil
Crystal structure of Mitochondrial class kappa glutathione transferase
Descriptor: GLUTATHIONE, Glutathione S-transferase, mitochondrial
Authors:Ladner, J.E, Parsons, J.F, Rife, C.L, Gilliland, G.L, Armstrong, R.N.
Deposit date:2003-10-08
Release date:2004-02-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Parallel Evolutionary Pathways for Glutathione Transferases: Structure and Mechanism of the Mitochondrial Class Kappa Enzyme rGSTK1-1
Biochemistry, 43, 2004
1OR2
DownloadVisualize
BU of 1or2 by Molmil
APOLIPOPROTEIN E3 (APOE3) TRUNCATION MUTANT 165
Descriptor: APOLIPOPROTEIN E
Authors:Rupp, B, Segelke, B.W, Forstner, M.
Deposit date:1999-03-25
Release date:2000-04-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Conformational flexibility in the apolipoprotein E amino-terminal domain structure determined from three new crystal forms: implications for lipid binding.
Protein Sci., 9, 2000
7MC4
DownloadVisualize
BU of 7mc4 by Molmil
Crystal structure of a single-chain E/F type bilin lyase-isomerase MpeQ
Descriptor: Bilin Lyase-Isomerase
Authors:Yang, X, Kumarapperuma, I.
Deposit date:2021-04-01
Release date:2022-02-23
Last modified:2022-04-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure and molecular mechanism of an E/F type bilin lyase-isomerase.
Structure, 30, 2022
7MMI
DownloadVisualize
BU of 7mmi by Molmil
Crystal structure of HCV NS3/4A D168A protease in complex with NR02-23
Descriptor: (2S)-1,1,1-trifluoropropan-2-yl {(2R,4S,6S,12Z,13aS,14aR,16aS)-2-[(7-methoxy-3-methylquinoxalin-2-yl)oxy]-14a-[(1-methylcyclopropane-1-sulfonyl)carbamoyl]-5,16-dioxo-1,2,3,5,6,7,8,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-6-yl}carbamate, NS3/4A protease, ZINC ION
Authors:Zephyr, J, Schiffer, C.A.
Deposit date:2021-04-29
Release date:2022-03-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Deciphering the Molecular Mechanism of HCV Protease Inhibitor Fluorination as a General Approach to Avoid Drug Resistance.
J.Mol.Biol., 434, 2022
3G1H
DownloadVisualize
BU of 3g1h by Molmil
Crystal structure of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with 5,6-dihydrouridine 5'-monophosphate
Descriptor: 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
Authors:Fedorov, A.A, Fedorov, E.V, Chan, K.K, Gerlt, J.A, Almo, S.C.
Deposit date:2009-01-29
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanism of the orotidine 5'-monophosphate decarboxylase-catalyzed reaction: evidence for substrate destabilization.
Biochemistry, 48, 2009
5I2X
DownloadVisualize
BU of 5i2x by Molmil
Crystal Structure of TPP1 K170del
Descriptor: Adrenocortical dysplasia protein homolog
Authors:Nandakumar, J, Smith, E.
Deposit date:2016-02-09
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional consequences of a disease mutation in the telomere protein TPP1.
Proc.Natl.Acad.Sci.USA, 113, 2016
1R9X
DownloadVisualize
BU of 1r9x by Molmil
Bacterial cytosine deaminase D314G mutant.
Descriptor: Cytosine deaminase, FE (III) ION, GLYCEROL, ...
Authors:Mahan, S.D, Ireton, G.C, Stoddard, B.L, Black, M.E.
Deposit date:2003-10-31
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Random mutagenesis and selection of Escherichia coli cytosine deaminase for cancer gene therapy.
Protein Eng.Des.Sel., 17, 2004
3SH0
DownloadVisualize
BU of 3sh0 by Molmil
Crystal Structure of E. coli undecaprenyl pyrophosphate synthase in complex with BPH-1065
Descriptor: 2-(dodecyloxy)-6-hydroxybenzoic acid, Undecaprenyl pyrophosphate synthase
Authors:Cao, R, Liu, Y.-L, Oldfield, E.
Deposit date:2011-06-15
Release date:2012-12-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Antibacterial drug leads targeting isoprenoid biosynthesis.
Proc.Natl.Acad.Sci.USA, 110, 2013
2MPU
DownloadVisualize
BU of 2mpu by Molmil
Structural and Functional analysis of the Hordeum vulgare L. HvGR-RBP1 protein, a glycine-rich RNA binding protein implicated in the regulation of barley leaf senescence and environmental adaptation
Descriptor: RBP1
Authors:Mason, K.E, Tripet, B.P, Eilers, B.J, Powell, P, Fischer, A.M, Copie, V.
Deposit date:2014-06-02
Release date:2014-12-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Biochemical Analysis of the Hordeum vulgare L. HvGR-RBP1 Protein, a Glycine-Rich RNA-Binding Protein Involved in the Regulation of Barley Plant Development and Stress Response.
Biochemistry, 53, 2014
7MCH
DownloadVisualize
BU of 7mch by Molmil
Crystal structure of a single-chain E/F type bilin lyase-isomerase MpeQ in space group C2221
Descriptor: bilin lyase-isomerase
Authors:Yang, X, Kumarapperuma, I.
Deposit date:2021-04-02
Release date:2022-08-24
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure and molecular mechanism of an E/F type bilin lyase-isomerase.
Structure, 30, 2022
1S2L
DownloadVisualize
BU of 1s2l by Molmil
Purine 2'deoxyribosyltransferase native structure
Descriptor: purine trans deoxyribosylase
Authors:Anand, R, Kaminski, P.A, Ealick, S.E.
Deposit date:2004-01-08
Release date:2004-03-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of purine 2'-deoxyribosyltransferase, substrate complexes, and the ribosylated enzyme intermediate at 2.0 A resolution.
Biochemistry, 43, 2004
1S2G
DownloadVisualize
BU of 1s2g by Molmil
Purine 2'deoxyribosyltransferase + 2'-deoxyadenosine
Descriptor: (2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol, purine trans deoxyribosylase
Authors:Anand, R, Kaminski, P.A, Ealick, S.E.
Deposit date:2004-01-08
Release date:2004-03-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of purine 2'-deoxyribosyltransferase, substrate complexes, and the ribosylated enzyme intermediate at 2.0 A resolution.
Biochemistry, 43, 2004
2FT3
DownloadVisualize
BU of 2ft3 by Molmil
Crystal structure of the biglycan dimer core protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Biglycan, CITRATE ANION
Authors:Scott, P.G, Dodd, C.M, Bergmann, E.M.
Deposit date:2006-01-23
Release date:2006-03-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal Structure of the Biglycan Dimer and Evidence That Dimerization Is Essential for Folding and Stability of Class I Small Leucine-rich Repeat Proteoglycans.
J.Biol.Chem., 281, 2006
2Y2Y
DownloadVisualize
BU of 2y2y by Molmil
Oxidised form of E. coli CsgC
Descriptor: ACETATE ION, CURLI PRODUCTION PROTEIN CSGC
Authors:Taylor, J.D, Salgado, P.S, Constable, S.C, Cota, E, Mathews, S.J.
Deposit date:2010-12-16
Release date:2011-09-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Atomic Resolution Insights Into Curli Fiber Biogenesis.
Structure, 19, 2011
1OD6
DownloadVisualize
BU of 1od6 by Molmil
The Crystal Structure of Phosphopantetheine adenylyltransferase from Thermus Thermophilus in complex with 4'-phosphopantetheine
Descriptor: 4'-PHOSPHOPANTETHEINE, PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE, SULFATE ION
Authors:Takahashi, H, Inagaki, E, Miyano, M, Tahirov, T.H.
Deposit date:2003-02-13
Release date:2003-03-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and Implications for the Thermal Stability of Phosphopantetheine Adenylyltransferase from Thermus Thermophilus.
Acta Crystallogr.,Sect.D, 60, 2004
1W8Y
DownloadVisualize
BU of 1w8y by Molmil
Crystal structure of the nitrocefin acyl-DD-peptidase from Actinomadura R39.
Descriptor: (2R)-2-{(1R)-2-OXO-1-[(2-THIENYLACETYL)AMINO]ETHYL}-5,6-DIHYDRO-2H-1,3-THIAZINE-4-CARBOXYLIC ACID, D-alanyl-D-alanine carboxypeptidase, MAGNESIUM ION, ...
Authors:Sauvage, E, Herman, R, Petrella, S, Duez, C, Frere, J.M, Charlier, P.
Deposit date:2004-10-01
Release date:2005-06-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the Actinomadura R39 Dd- Peptidase Reveals New Domains in Penicillin- Binding Proteins.
J.Biol.Chem., 280, 2005
5FED
DownloadVisualize
BU of 5fed by Molmil
EGFR kinase domain in complex with a covalent aminobenzimidazole inhibitor.
Descriptor: Epidermal growth factor receptor, ~{N}-[7-methyl-1-[(3~{R})-1-propanoylazepan-3-yl]benzimidazol-2-yl]-3-(trifluoromethyl)benzamide
Authors:DiDonato, M, Spraggon, G.
Deposit date:2015-12-16
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.651 Å)
Cite:Discovery of (R,E)-N-(7-Chloro-1-(1-[4-(dimethylamino)but-2-enoyl]azepan-3-yl)-1H-benzo[d]imidazol-2-yl)-2-methylisonicotinamide (EGF816), a Novel, Potent, and WT Sparing Covalent Inhibitor of Oncogenic (L858R, ex19del) and Resistant (T790M) EGFR Mutants for the Treatment of EGFR Mutant Non-Small-Cell Lung Cancers.
J.Med.Chem., 59, 2016
1W8Q
DownloadVisualize
BU of 1w8q by Molmil
Crystal Structure of the DD-Transpeptidase-carboxypeptidase from Actinomadura R39
Descriptor: COBALT (II) ION, D-ALANYL-D-ALANINE CARBOXYPEPTIDASE, SULFATE ION
Authors:Sauvage, E, Herman, R, Petrella, S, Duez, C, Frere, J.M, Charlier, P.
Deposit date:2004-09-24
Release date:2005-06-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal Structure of the Actinomadura R39 Dd-Peptidase Reveals New Domains in Penicillin-Binding Proteins.
J.Biol.Chem., 280, 2005
1W5D
DownloadVisualize
BU of 1w5d by Molmil
Crystal structure of PBP4a from Bacillus subtilis
Descriptor: CALCIUM ION, PENICILLIN-BINDING PROTEIN
Authors:Sauvage, E, Herman, R, Petrella, S, Duez, C, Frere, J.M, Charlier, P.
Deposit date:2004-08-06
Release date:2005-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the Bacillus Subtilis Penicillin-Binding Protein 4A, and its Complex with a Peptidoglycan Mimetic Peptide.
J.Mol.Biol., 371, 2007

223532

건을2024-08-07부터공개중

PDB statisticsPDBj update infoContact PDBjnumon