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4LYO
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BU of 4lyo by Molmil
CROSS-LINKED CHICKEN LYSOZYME CRYSTAL IN NEAT ACETONITRILE, THEN BACK-SOAKED IN WATER
Descriptor: LYSOZYME
Authors:Huang, Q, Wang, Z, Zhu, G, Qian, M, Shao, M, Jia, Y, Tang, Y.
Deposit date:1998-03-11
Release date:1998-05-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:X-ray studies on cross-linked lysozyme crystals in acetonitrile-water mixture.
Biochim.Biophys.Acta, 1384, 1998
2R7J
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BU of 2r7j by Molmil
Crystal Structure of rotavirus non structural protein NSP2 with H225A mutation
Descriptor: Non-structural RNA-binding protein 35
Authors:Kumar, M, Jayaram, H, Prasad, B.V.V.
Deposit date:2007-09-09
Release date:2007-10-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystallographic and Biochemical Analysis of Rotavirus NSP2 with Nucleotides Reveals a Nucleoside Diphosphate Kinase-Like Activity
J.Virol., 81, 2007
2JKB
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BU of 2jkb by Molmil
Crystal structure of Streptococcus pneumoniae NanB in complex with 2, 7-anhydro-Neu5Ac
Descriptor: 1,2-ETHANEDIOL, 2-ACETYLAMINO-7-(1,2-DIHYDROXY-ETHYL)-3-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCTANE-5-CARBOXYLIC ACID, SIALIDASE B
Authors:Gut, H, King, S.J, Walsh, M.A.
Deposit date:2008-08-26
Release date:2008-09-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural and Functional Studies of Streptococcus Pneumoniae Neuraminidase B: An Intramolecular Trans-Sialidase.
FEBS Lett., 582, 2008
5Z5I
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BU of 5z5i by Molmil
Crystal structure of a thermostable glycoside hydrolase family 43 {beta}-1,4-xylosidase from Geobacillus thermoleovorans IT-08 in complex with L-arabinose and D-xylose
Descriptor: Beta-xylosidase, CALCIUM ION, alpha-D-xylopyranose, ...
Authors:Rohman, A, van Oosterwijk, N, Puspaningsih, N.N.T, Dijkstra, B.W.
Deposit date:2018-01-18
Release date:2018-04-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of product inhibition by arabinose and xylose of the thermostable GH43 beta-1,4-xylosidase from Geobacillus thermoleovorans IT-08.
PLoS ONE, 13, 2018
3KV2
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BU of 3kv2 by Molmil
HIGH RESOLUTION STRUCTURE OF HUMAN ARGINASE I IN COMPLEX WITH THE STRONG INHIBITOR N(omega)-hydroxy-nor-L-arginine (nor-NOHA)
Descriptor: Arginase-1, MANGANESE (II) ION, NOR-N-OMEGA-HYDROXY-L-ARGININE
Authors:Di Costanzo, L, Christianson, D.W.
Deposit date:2009-11-28
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Inhibition of human arginase I by substrate and product analogues.
Arch.Biochem.Biophys., 496, 2010
2JKA
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BU of 2jka by Molmil
Native structure of a family 97 alpha-glucosidase from Bacteroides thetaiotaomicron
Descriptor: 1,2-ETHANEDIOL, ALPHA-GLUCOSIDASE (ALPHA-GLUCOSIDASE SUSB), CALCIUM ION
Authors:Gloster, T.M, Turkenburg, J.P, Potts, J.R, Henrissat, B, Davies, G.J.
Deposit date:2008-08-23
Release date:2008-09-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Divergence of Catalytic Mechanism within a Glycosidase Family Provides Insight Into Evolution of Carbohydrate Metabolism by Human Gut Flora.
Chem.Biol., 15, 2008
2JIW
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BU of 2jiw by Molmil
Bacteroides thetaiotaomicron GH84 O-GlcNAcase in complex with 2- Acetylamino-2-deoxy-1-epivalienamine
Descriptor: N-[(1S,2R,5R,6R)-2-AMINO-5,6-DIHYDROXY-4-(HYDROXYMETHYL)CYCLOHEX-3-EN-1-YL]ACETAMIDE, O-GLCNACASE BT_4395
Authors:Dennis, R.J, Davies, G.J.
Deposit date:2007-07-02
Release date:2007-08-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A 1-Acetamido Derivative of 6-Epi-Valienamine: An Inhibitor of a Diverse Group of Beta-N-Acetylglucosaminidases.
Org.Biomol.Chem., 5, 2007
3G6L
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BU of 3g6l by Molmil
The crystal structure of a chitinase CrChi1 from the nematophagous fungus Clonostachys rosea
Descriptor: Chitinase
Authors:Gan, Z, Lou, Z, Rao, Z, Zhang, K.-Q.
Deposit date:2009-02-06
Release date:2010-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure and mutagenesis analysis of chitinase CrChi1 from the nematophagous fungus Clonostachys rosea in complex with the inhibitor caffeine
Microbiology, 156, 2010
2RBR
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BU of 2rbr by Molmil
2-phenoxyethanol in complex with T4 lysozyme L99A/M102Q
Descriptor: 2-phenoxyethanol, Lysozyme, PHOSPHATE ION
Authors:Graves, A.P, Boyce, S.E, Shoichet, B.K.
Deposit date:2007-09-19
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.433 Å)
Cite:Rescoring docking hit lists for model cavity sites: predictions and experimental testing.
J.Mol.Biol., 377, 2008
5Z73
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BU of 5z73 by Molmil
Crystal structure of alkaline/neutral invertase InvB from Anabaena sp. PCC 7120
Descriptor: Alr0819 protein, GLYCEROL
Authors:Xie, J, Hu, H.X, Cai, K, Yang, F, Jiang, Y.L, Chen, Y, Zhou, C.Z.
Deposit date:2018-01-27
Release date:2018-05-30
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural and enzymatic analyses of Anabaena heterocyst-specific alkaline invertase InvB.
FEBS Lett., 592, 2018
2RB2
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BU of 2rb2 by Molmil
3-methylbenzylazide in complex with T4 lysozyme L99A
Descriptor: 1-(azidomethyl)-3-methylbenzene, Lysozyme, PHOSPHATE ION
Authors:Graves, A.P, Boyce, S.E, Shoichet, B.K.
Deposit date:2007-09-17
Release date:2008-03-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.463 Å)
Cite:Rescoring docking hit lists for model cavity sites: predictions and experimental testing.
J.Mol.Biol., 377, 2008
4TNH
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BU of 4tnh by Molmil
RT XFEL structure of Photosystem II in the dark state at 4.9 A resolution
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Kern, J, Tran, R, Alonso-Mori, R, Koroidov, S, Echols, N, Hattne, J, Ibrahim, M, Gul, S, Laksmono, H, Sierra, R.G, Gildea, R.J, Han, G, Hellmich, J, Lassalle-Kaiser, B, Chatterjee, R, Brewster, A, Stan, C.A, Gloeckner, C, Lampe, A, DiFiore, D, Milathianaki, D, Fry, A.R, Seibert, M.M, Koglin, J.E, Gallo, E, Uhlig, J, Sokaras, D, Weng, T.-C, Zwart, P.H, Skinner, D.E, Bogan, M.J, Messerschmidt, M, Glatzel, P, Williams, G.J, Boutet, S, Adams, P.D, Zouni, A, Messinger, J, Sauter, N.K, Bergmann, U, Yano, J, Yachandra, V.K.
Deposit date:2014-06-04
Release date:2014-07-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.900007 Å)
Cite:Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.
Nat Commun, 5, 2014
5Z3W
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BU of 5z3w by Molmil
Malate dehydrogenase binds silver at C113
Descriptor: Malate dehydrogenase, SILVER ION
Authors:Wang, H, Wang, M, Sun, H.
Deposit date:2018-01-09
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Atomic differentiation of silver binding preference in protein targets: Escherichia coli malate dehydrogenase as a paradigm
Chem Sci, 2020
4ND1
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BU of 4nd1 by Molmil
Crystal structure of the lactate dehydrogenase from cryptosporidium parvum complexed with cofactor (b-nicotinamide adenine dinucleotide) and inhibitor (oxamic acid)
Descriptor: GLYCEROL, Lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase, ...
Authors:Chattopadhyay, D, Cook, W.J.
Deposit date:2013-10-25
Release date:2014-12-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Biochemical and structural characterization of Cryptosporidium parvum Lactate dehydrogenase.
Int.J.Biol.Macromol., 74C, 2014
5Z7P
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BU of 5z7p by Molmil
SmChiA sliding-intermediate with chitotriose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A, GLYCEROL
Authors:Nakamura, A, Iino, R.
Deposit date:2018-01-30
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Processive chitinase is Brownian monorail operated by fast catalysis after peeling rail from crystalline chitin.
Nat Commun, 9, 2018
4NWE
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BU of 4nwe by Molmil
Lysozyme UNDER 30 BAR PRESSURE OF NITROUS OXIDE
Descriptor: CHLORIDE ION, Lysozyme C, NITROUS OXIDE
Authors:Colloc'h, N, Prange, T.
Deposit date:2013-12-06
Release date:2014-09-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystallographic Studies with Xenon and Nitrous Oxide Provide Evidence for Protein-dependent Processes in the Mechanisms of General Anesthesia
Anesthesiology, 121, 2014
2JBT
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BU of 2jbt by Molmil
Structure of the monooxygenase component of p-hydroxyphenylacetate hydroxylase from Acinetobacter baumannii
Descriptor: 4-HYDROXYPHENYLACETATE, FLAVIN MONONUCLEOTIDE, P-HYDROXYPHENYLACETATE HYDROXYLASE C2:OXYGENASE COMPONENT
Authors:Alfieri, A, Mattevi, A.
Deposit date:2006-12-11
Release date:2007-01-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the Monooxygenase Component of a Two-Component Flavoprotein Monooxygenase.
Proc.Natl.Acad.Sci.USA, 104, 2007
3KX2
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BU of 3kx2 by Molmil
Crystal structure of Prp43p in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
Authors:Nielsen, K.H, Andersen, G.R, He, Y.
Deposit date:2009-12-02
Release date:2010-01-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the function of DEAH helicases
Embo Rep., 11, 2010
2WSB
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BU of 2wsb by Molmil
Crystal structure of the short-chain dehydrogenase Galactitol- Dehydrogenase (GatDH) of Rhodobacter sphaeroides in complex with NAD
Descriptor: GALACTITOL DEHYDROGENASE, MAGNESIUM ION, N-PROPANOL, ...
Authors:Carius, Y, Christian, H, Faust, A, Kornberger, P, Kohring, G.W, Giffhorn, F, Scheidig, A.J.
Deposit date:2009-09-04
Release date:2010-04-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Insight Into Substrate Differentiation of the Sugar-Metabolizing Enzyme Galactitol Dehydrogenase from Rhodobacter Sphaeroides D.
J.Biol.Chem., 285, 2010
4NGV
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BU of 4ngv by Molmil
Previously de-ionized HEW lysozyme batch crystallized in 0.5 M YbCl3
Descriptor: CHLORIDE ION, Lysozyme C, YTTERBIUM (III) ION
Authors:Benas, P, Legrand, L, Ries-Kautt, M.
Deposit date:2013-11-03
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Weak protein-cationic co-ion interactions addressed by X-ray crystallography and mass spectrometry.
Acta Crystallogr.,Sect.D, 70, 2014
2WJ3
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BU of 2wj3 by Molmil
CRYSTAL STRUCTURE OF THE COFACTOR-DEVOID 1-H-3-HYDROXY-4- OXOQUINALDINE 2,4-DIOXYGENASE (HOD) FROM ARTHROBACTER NITROGUAJACOLICUS RU61A
Descriptor: 1-H-3-HYDROXY-4-OXOQUINALDINE 2,4-DIOXYGENASE, GLYCEROL, S,R MESO-TARTARIC ACID
Authors:Steiner, R.A.
Deposit date:2009-05-20
Release date:2010-01-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural Basis for Cofactor-Independent Dioxygenation of N-Heteroaromatic Compounds at the {Alpha}/{Beta}-Hydrolase Fold.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KX3
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BU of 3kx3 by Molmil
Crystal structure of Bacillus megaterium BM3 heme domain mutant L86E
Descriptor: Bifunctional P-450/NADPH-P450 reductase, N-PALMITOYLGLYCINE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Girvan, H.M, Levy, C.W, Leys, D, Munro, A.W.
Deposit date:2009-12-02
Release date:2010-05-19
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Glutamate-haem ester bond formation is disfavoured in flavocytochrome P450 BM3: characterization of glutamate substitution mutants at the haem site of P450 BM3.
Biochem.J., 427, 2010
7Y98
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BU of 7y98 by Molmil
Crystal structure of CYP109B4 from Bacillus Sonorensis in complex with Testosterone
Descriptor: Cytochrome P450 monooxygenase YjiB, PROTOPORPHYRIN IX CONTAINING FE, TESTOSTERONE
Authors:Shen, P.P, Huang, J.-W, Li, X, Liu, W.D, Chen, C.-C, Guo, R.-T.
Deposit date:2022-06-24
Release date:2023-05-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Rationally Controlling Selective Steroid Hydroxylation via Scaffold Sampling of a P450 Family
Acs Catalysis, 13, 2023
4NHS
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BU of 4nhs by Molmil
X-ray structure of the complex between hen egg white lysozyme and pentachlorocarbonyliridate(III) (9 days)
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
Authors:Petruk, A.A, Bikiel, D.E, Vergara, A, Merlino, A.
Deposit date:2013-11-05
Release date:2014-09-17
Last modified:2015-06-24
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Interaction between proteins and Ir based CO releasing molecules: mechanism of adduct formation and CO release.
Inorg.Chem., 53, 2014
2WM5
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BU of 2wm5 by Molmil
X-ray structure of the substrate-free Mycobacterium tuberculosis cytochrome P450 CYP124
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, PUTATIVE CYTOCHROME P450 124
Authors:Johnston, J.B, Kells, P.M, Podust, L.M, Ortiz de Montellano, P.R.
Deposit date:2009-06-30
Release date:2009-10-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Biochemical and structural characterization of CYP124: a methyl-branched lipid omega-hydroxylase from Mycobacterium tuberculosis.
Proc. Natl. Acad. Sci. U.S.A., 106, 2009

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