PDB: 1263 resultsInfo pagesStatus searchChemie searchBIRD

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5NVD	Crystal structure of hexameric CBS-CP12 protein from bloom-forming cyanobacteria at 2.5 A resolution in P6322 crystal form Descriptor: CBS-CP12 Authors: Hackenberg, C, Hakanpaa, J, Eigner, C, Antonyuk, S.V, Dittmann, E, Lamzin, V.S. Deposit date: 2017-05-04 Release date: 2018-05-30 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural and functional insights into the unique CBS-CP12 fusion protein family in cyanobacteria. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8FHL	Structure of pyruvate dehydrogenase phosphatase regulatory subunit neoepitope presented by H2-Dd Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-D alpha chain, ... Authors: Custodio, J.M.F, Baker, B.M. Deposit date: 2022-12-14 Release date: 2023-06-28 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.194 Å) Cite: Structure of Pyruvate dehydrogenase phosphatase regulatory subunit neoepitope presented by H2-Dd To Be Published
7W5Y	Cryo-EM structure of SoxS-dependent transcription activation complex with fpr promoter DNA Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Lin, W, Feng, Y. Deposit date: 2021-11-30 Release date: 2022-10-26 Last modified: 2024-06-26 Method: ELECTRON MICROSCOPY (4.2 Å) Cite: Structural basis of three different transcription activation strategies adopted by a single regulator SoxS. Nucleic Acids Res., 50, 2022
7W5W	Cryo-EM structure of SoxS-dependent transcription activation complex with micF promoter DNA Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Lin, W, Feng, Y. Deposit date: 2021-11-30 Release date: 2022-10-26 Last modified: 2024-06-26 Method: ELECTRON MICROSCOPY (4.55 Å) Cite: Structural basis of three different transcription activation strategies adopted by a single regulator SoxS. Nucleic Acids Res., 50, 2022
7W5X	Cryo-EM structure of SoxS-dependent transcription activation complex with zwf promoter DNA Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Lin, W, Feng, Y, Shi, J. Deposit date: 2021-11-30 Release date: 2022-10-26 Last modified: 2024-06-26 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Structural basis of three different transcription activation strategies adopted by a single regulator SoxS. Nucleic Acids Res., 50, 2022
5NPL	Crystal structure of hexameric CBS-CP12 protein from bloom-forming cyanobacteria, Yb-derivative at 2.8 A resolution Descriptor: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, Similar to tr|Q8YYT1|Q8YYT1, YTTERBIUM (III) ION Authors: Hackenberg, C, Hakanpaa, J, Antonyuk, S.V, Dittmann, E, Lamzin, V.S. Deposit date: 2017-04-17 Release date: 2018-05-30 Last modified: 2018-07-11 Method: X-RAY DIFFRACTION (2.79 Å) Cite: Structural and functional insights into the unique CBS-CP12 fusion protein family in cyanobacteria. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5NMU	Structure of hexameric CBS-CP12 protein from bloom-forming cyanobacteria Descriptor: CBS-CP12, CHLORIDE ION Authors: Hackenberg, C, Hakanpaa, J, Antonyuk, S.V, Dittmann, E, Lamzin, V.S. Deposit date: 2017-04-07 Release date: 2018-05-16 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structural and functional insights into the unique CBS-CP12 fusion protein family in cyanobacteria. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3J4Q	Pseudo-atomic model of the AKAP18-PKA complex in a bent conformation derived from electron microscopy Descriptor: A-kinase anchor protein 18, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-alpha regulatory subunit Authors: Reichow, S.L, Gonen, T. Deposit date: 2013-09-25 Release date: 2013-11-13 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (35 Å) Cite: Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation. Elife, 2, 2013
3J4R	Pseudo-atomic model of the AKAP18-PKA Complex in a linear conformation derived from electron microscopy Descriptor: A-kinase anchor protein 18, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-alpha regulatory subunit Authors: Reichow, S.L, Gonen, T. Deposit date: 2013-09-25 Release date: 2013-11-13 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (35 Å) Cite: Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation. Elife, 2, 2013
8GXK	Pseudomonas jinjuensis N-acetyltransferase Descriptor: COENZYME A, Protein N-acetyltransferase, RimJ/RimL family Authors: Song, Y.J, Bao, R. Deposit date: 2022-09-20 Release date: 2022-10-12 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.78 Å) Cite: The novel type II toxin-antitoxin PacTA modulates Pseudomonas aeruginosa iron homeostasis by obstructing the DNA-binding activity of Fur. Nucleic Acids Res., 50, 2022
4KFC	Crystal structure of a hyperactive mutant of response regulator KdpE complexed to its promoter DNA Descriptor: KDP operon transcriptional regulatory protein KdpE, Promoter DNA Authors: Kumar, S, Narayanan, A, Yernool, D.A. Deposit date: 2013-04-26 Release date: 2014-02-19 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.53 Å) Cite: An asymmetric heterodomain interface stabilizes a response regulator-DNA complex. Nat Commun, 5, 2014
3L9Q	Crystal structure of human polymerase alpha-primase p58 iron-sulfur cluster domain Descriptor: DNA primase large subunit, IRON/SULFUR CLUSTER, SULFATE ION Authors: Vaithiyalingam, S, Eichman, B.F, Chazin, W.J. Deposit date: 2010-01-05 Release date: 2010-07-14 Last modified: 2011-11-16 Method: X-RAY DIFFRACTION (1.698 Å) Cite: Insights into eukaryotic DNA priming from the structure and functional interactions of the 4Fe-4S cluster domain of human DNA primase. Proc.Natl.Acad.Sci.USA, 107, 2010
7R0W	2.8 Angstrom cryo-EM structure of the dimeric cytochrome b6f-PetP complex from Synechocystis sp. PCC 6803 with natively bound lipids and plastoquinone molecules Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S,8E)-1-{[(2S)-1-hydroxy-3-{[(1S)-1-hydroxypentadecyl]oxy}propan-2-yl]oxy}heptadec-8-en-1-ol, (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, ... Authors: Farmer, D.F, Proctor, M.S, Malone, L.A, Swainsbury, D.P.K, Hawkings, F.R, Hitchcock, A, Johnson, M.P. Deposit date: 2022-02-02 Release date: 2022-07-06 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Cryo-EM structures of the Synechocystis sp. PCC 6803 cytochrome b6f complex with and without the regulatory PetP subunit. Biochem.J., 479, 2022
7WFG	Subcomplexes A and E in NDH complex from Arabidopsis Descriptor: IRON/SULFUR CLUSTER, NAD(P)H-quinone oxidoreductase subunit H, chloroplastic, ... Authors: Pan, X.W, Li, M. Deposit date: 2021-12-26 Release date: 2022-03-16 Last modified: 2024-06-26 Method: ELECTRON MICROSCOPY (4.33 Å) Cite: Supramolecular assembly of chloroplast NADH dehydrogenase-like complex with photosystem I from Arabidopsis thaliana. Mol Plant, 15, 2022
4KNY	Crystal structure of the response regulator KdpE complexed to DNA in an active-like conformation Descriptor: KDP operon transcriptional regulatory protein KdpE, Promoter DNA Authors: Kumar, S, Narayanan, A, Yernool, D.A. Deposit date: 2013-05-10 Release date: 2014-02-19 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.945 Å) Cite: An asymmetric heterodomain interface stabilizes a response regulator-DNA complex. Nat Commun, 5, 2014
6PWJ	Vibrio cholerae LapD S helix-GGDEF-EAL (apo) Descriptor: GGDEF and EAL domain-containing protein, MAGNESIUM ION, TRIETHYLENE GLYCOL Authors: Giglio, K.M, Cooley, R.B, Sondermann, H. Deposit date: 2019-07-23 Release date: 2019-10-09 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.7 Å) Cite: A Conserved Regulatory Circuit Controls Large Adhesins in Vibrio cholerae. Mbio, 10, 2019
4WEP	Apo YehZ from Escerichia coli Descriptor: Putative osmoprotectant uptake system substrate-binding protein OsmF Authors: Kimber, M.S, Lang, S, Mendoza, K, Wood, J.M. Deposit date: 2014-09-10 Release date: 2015-09-16 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.5 Å) Cite: YehZYXW of Escherichia coli Is a Low-Affinity, Non-Osmoregulatory Betaine-Specific ABC Transporter. Biochemistry, 54, 2015
8ALO	Heterodimer formation of sensory domains of Vibrio cholerae regulators ToxR and ToxS Descriptor: Cholera toxin transcriptional activator, Transmembrane regulatory protein ToxS Authors: Gubensaek, N, Sagmeister, T, Pavkov-Keller, T, Zangger, K, Buhlheller, C, Wagner, G.E. Deposit date: 2022-08-01 Release date: 2023-09-13 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (3.002 Å) Cite: Vibrio cholerae's ToxRS bile sensing system. Elife, 12, 2023
1MHZ	METHANE MONOOXYGENASE HYDROXYLASE Descriptor: FE (III) ION, METHANE MONOOXYGENASE HYDROXYLASE Authors: Elango, N, Radhakrishnan, R, Froland, W.A, Waller, B.J, Earhart, C.A, Lipscomb, J.D, Ohlendorf, D.H. Deposit date: 1996-10-21 Release date: 1997-05-15 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Crystal structure of the hydroxylase component of methane monooxygenase from Methylosinus trichosporium OB3b Protein Sci., 6, 1997
1MHY	METHANE MONOOXYGENASE HYDROXYLASE Descriptor: FE (III) ION, METHANE MONOOXYGENASE HYDROXYLASE Authors: Elango, N, Radhakrishnan, R, Froland, W.A, Waller, B.J, Earhart, C.A, Lipscomb, J.D, Ohlendorf, D.H. Deposit date: 1996-10-21 Release date: 1997-05-15 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of the hydroxylase component of methane monooxygenase from Methylosinus trichosporium OB3b Protein Sci., 6, 1997
3GBG	Crystal Structure of ToxT from Vibrio Cholerae O395 Descriptor: PALMITOLEIC ACID, TCP pilus virulence regulatory protein Authors: Lowden, M.J, Kull, F.J. Deposit date: 2009-02-19 Release date: 2010-02-23 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structure of Vibrio cholerae ToxT reveals a mechanism for fatty acid regulation of virulence genes. Proc.Natl.Acad.Sci.USA, 107, 2010
6IEO	Crystal structure of Mycobacterium tuberculosis HtrA1 (Rv1223) in regulated conformation Descriptor: Probable serine protease HtrA (DEGP protein), phenylmethanesulfonic acid Authors: Gupta, A.K, Gopal, B. Deposit date: 2018-09-14 Release date: 2018-12-19 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.83 Å) Cite: The crystal structure of Mycobacterium tuberculosis high-temperature requirement A protein reveals an autoregulatory mechanism. Acta Crystallogr F Struct Biol Commun, 74, 2018
8HPO	Cryo-EM structure of a SIN3/HDAC complex from budding yeast Descriptor: Histone deacetylase RPD3, PHOSPHOTHREONINE, POTASSIUM ION, ... Authors: Guo, Z, Zhan, X, Wang, C. Deposit date: 2022-12-12 Release date: 2023-05-03 Last modified: 2023-07-05 Method: ELECTRON MICROSCOPY (2.6 Å) Cite: Structure of a SIN3-HDAC complex from budding yeast. Nat.Struct.Mol.Biol., 30, 2023
3BES	Structure of a Poxvirus ifngbp/ifng Complex Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Interferon gamma, Interferon-gamma binding protein C4R, ... Authors: Nuara, A.A, Walter, M.R. Deposit date: 2007-11-20 Release date: 2008-02-12 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structure and mechanism of IFN-gamma antagonism by an orthopoxvirus IFN-gamma-binding protein. Proc.Natl.Acad.Sci.Usa, 105, 2008
4CZT	Crystal structure of the kinase domain of CIPK23 Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 23, SULFATE ION Authors: Chaves-Sanjuan, A, Sanchez-Barrena, M.J, Albert, A. Deposit date: 2014-04-22 Release date: 2014-10-15 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural Basis of the Regulatory Mechanism of the Plant Cipk Family of Protein Kinases Controlling Ion Homeostasis and Abiotic Stress Proc.Natl.Acad.Sci.USA, 111, 2014

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