PDB: 225399 resultsInfo pagesStatus searchChemie searchBIRD

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4OLQ	Crystal Structure of a Putative enoyl-CoA hydratase/isomerase family protein from Hyphomonas neptunium Descriptor: D-MALATE, DI(HYDROXYETHYL)ETHER, Enoyl-CoA hydratase/isomerase family protein, ... Authors: Szlachta, K, Cooper, D.R, Chapman, H.C, Cymborowski, M.T, Stead, M, Hillerich, B, Ahmed, M, Bonanno, J.B, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC) Deposit date: 2014-01-24 Release date: 2014-03-12 Last modified: 2022-04-13 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Crystal Structure of a Putative enoyl-CoA hydratase/isomerase family protein from Hyphomonas neptunium To be Published
2I80	Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies Descriptor: 3-CHLORO-2,2-DIMETHYL-N-[4-(TRIFLUOROMETHYL)PHENYL]PROPANAMIDE, D-alanine-D-alanine ligase Authors: Liu, S, Chang, J.S, Herberg, J.T, Horng, M.-M, Tomich, P.K, Lin, A.H, Marotti, K.R. Deposit date: 2006-08-31 Release date: 2006-09-26 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.19 Å) Cite: Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies. Proc.Natl.Acad.Sci.Usa, 103, 2006
1XTB	Crystal Structure of Rabbit Phosphoglucose Isomerase Complexed with Sorbitol-6-Phosphate Descriptor: D-SORBITOL-6-PHOSPHATE, phosphoglucose isomerase Authors: Lee, J.H, Jeffery, C.J. Deposit date: 2004-10-21 Release date: 2005-03-22 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2 Å) Cite: The crystal structure of rabbit phosphoglucose isomerase complexed with D-sorbitol-6-phosphate, an analog of the open chain form of D-glucose-6-phosphate. Protein Sci., 14, 2005
3AX5	Crystal structure of rat TOM20-ALDH presequence complex: A complex (form1) between Tom20 and a disulfide-bridged presequence peptide containing D-Cys and L-Cys at the i and i+3 positions. Descriptor: Aldehyde dehydrogenase, mitochondrial, Mitochondrial import receptor subunit TOM20 homolog, ... Authors: Saitoh, T, Maita, Y, Kohda, D. Deposit date: 2011-03-29 Release date: 2011-07-06 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystallographic snapshots of tom20-mitochondrial presequence interactions with disulfide-stabilized peptides. Biochemistry, 50, 2011
1ZMH	Crystal structure of human neutrophil peptide 2, HNP-2 (variant Gly16-> D-Ala) Descriptor: GLYCEROL, HEXAETHYLENE GLYCOL, Neutrophil defensin 2, ... Authors: Lubkowski, J, Prahl, A, Lu, W. Deposit date: 2005-05-10 Release date: 2005-08-16 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Reconstruction of the conserved beta-bulge in mammalian defensins using D-amino acids. J.Biol.Chem., 280, 2005
1ZMI	Crystal structure of human alpha_defensin-2 (variant GLY16->D-ALA), P 32 2 1 space group ) Descriptor: GLYCEROL, Neutrophil defensin 2, SULFATE ION Authors: Lubkowski, J, Prahl, A, Lu, W. Deposit date: 2005-05-10 Release date: 2005-08-16 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.15 Å) Cite: Reconstruction of the conserved beta-bulge in mammalian defensins using D-amino acids. J.Biol.Chem., 280, 2005
2I8C	Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-alanine-D-alanine ligase, MAGNESIUM ION, ... Authors: Liu, S, Chang, J.S, Herberg, J.T, Horng, M, Tomich, P.K, Lin, A.H, Marotti, K.R. Deposit date: 2006-09-01 Release date: 2006-09-26 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.46 Å) Cite: Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies. Proc.Natl.Acad.Sci.Usa, 103, 2006
4OCB	Z-DNA dodecamer d(CGCGCGCGCGCG)2 at 0.75 A resolution solved by P-SAD Descriptor: d(CGCGCGCGCGCG)2 duplex Authors: Luo, Z, Dauter, M, Dauter, Z. Deposit date: 2014-01-08 Release date: 2014-01-22 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (0.75 Å) Cite: Phosphates in the Z-DNA dodecamer are flexible, but their P-SAD signal is sufficient for structure solution Acta Crystallogr.,Sect.D, D70, 2014
2YYF	Purification and structural characterization of a D-amino acid containing conopeptide, marmophine, from Conus marmoreus Descriptor: M-conotoxin mr12 Authors: Huang, F, Du, W, Han, Y, Wang, C. Deposit date: 2007-04-29 Release date: 2008-04-08 Last modified: 2022-03-16 Method: SOLUTION NMR Cite: Purification and structural characterization of a D-amino acid-containing conopeptide, conomarphin, from Conus marmoreus. Febs J., 275, 2008
3THE	Crystal structure of Co2+2-HAI (pH 8.5) Descriptor: Arginase-1, BICINE, COBALT (II) ION Authors: D'Antonio, E.L, Christianson, D.W. Deposit date: 2011-08-18 Release date: 2011-09-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.97 Å) Cite: Crystal structures of complexes with cobalt-reconstituted human arginase I. Biochemistry, 50, 2011
3TF3	Crystal structure of metal-free Human Arginase I Descriptor: Arginase-1 Authors: D'Antonio, E.L, Christianson, D.W. Deposit date: 2011-08-15 Release date: 2011-08-31 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.64 Å) Cite: Crystal structures of complexes with cobalt-reconstituted human arginase I. Biochemistry, 50, 2011
3TH7	Crystal structure of unliganded Co2+2-HAI (pH 7.0) Descriptor: Arginase-1, COBALT (II) ION Authors: D'Antonio, E.L, Christianson, D.W. Deposit date: 2011-08-18 Release date: 2011-09-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structures of complexes with cobalt-reconstituted human arginase I. Biochemistry, 50, 2011
2P64	D domain of b-TrCP Descriptor: CADMIUM ION, F-box/WD repeat protein 1A Authors: Neculai, D, Orlicky, S, Ceccarelli, D. Deposit date: 2007-03-16 Release date: 2007-06-19 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Suprafacial orientation of the SCFCdc4 dimer accommodates multiple geometries for substrate ubiquitination. Cell(Cambridge,Mass.), 129, 2007
2Q2Q	Structure of D-3-Hydroxybutyrate Dehydrogenase from Pseudomonas putida Descriptor: Beta-D-hydroxybutyrate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE Authors: Paithankar, K.S, Feller, C, Kuettner, E.B, Keim, A, Grunow, M, Strater, N. Deposit date: 2007-05-29 Release date: 2007-10-30 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Cosubstrate-induced dynamics of D-3-hydroxybutyrate dehydrogenase from Pseudomonas putida. Febs J., 274, 2007
2FJW	d(CTTGAATGCATTCAAG) in complex with MMLV RT catalytic fragment Descriptor: 5'-D(*CP*TP*TP*GP*AP*AP*TP*G)-3', 5'-D(P*CP*AP*TP*TP*CP*AP*AP*G)-3', Reverse transcriptase Authors: Goodwin, K.D, Georgiadis, M.M. Deposit date: 2006-01-03 Release date: 2006-06-27 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.95 Å) Cite: A High-Throughput, High-Resolution Strategy for the Study of Site-Selective DNA Binding Agents: Analysis of a "Highly Twisted" Benzimidazole-Diamidine. J.Am.Chem.Soc., 128, 2006
2Q2W	Structure of D-3-Hydroxybutyrate Dehydrogenase from Pseudomonas putida Descriptor: Beta-D-hydroxybutyrate dehydrogenase Authors: Paithankar, K.S, Feller, C, Kuettner, E.B, Keim, A, Grunow, M, Strater, N. Deposit date: 2007-05-29 Release date: 2007-10-30 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.12 Å) Cite: Cosubstrate-induced dynamics of D-3-hydroxybutyrate dehydrogenase from Pseudomonas putida. Febs J., 274, 2007
2Q2V	Structure of D-3-Hydroxybutyrate Dehydrogenase from Pseudomonas putida Descriptor: Beta-D-hydroxybutyrate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE Authors: Paithankar, K.S, Feller, C, Kuettner, E.B, Keim, A, Grunow, M, Strater, N. Deposit date: 2007-05-29 Release date: 2007-10-30 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Cosubstrate-induced dynamics of D-3-hydroxybutyrate dehydrogenase from Pseudomonas putida. Febs J., 274, 2007
2R2R	d(ATTAGTTATAACTAAT) complexed with MMLV RT catalytic fragment Descriptor: DNA (5'-D(*DAP*DTP*DTP*DAP*DGP*DTP*DTP*DA)-3'), DNA (5'-D(P*DTP*DAP*DAP*DCP*DTP*DAP*DAP*DT)-3'), Reverse transcriptase Authors: Goodwin, K.D, Lewis, M.A, Long, E.C, Georgiadis, M.M. Deposit date: 2007-08-27 Release date: 2008-07-22 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structure of DNA-bound Co(III) bleomycin B2: Insights on intercalation and minor groove binding. Proc.Natl.Acad.Sci.Usa, 105, 2008
3THJ	Crystal structure of the Co2+2-HAI-L-Orn complex Descriptor: Arginase-1, COBALT (II) ION, L-ornithine Authors: D'Antonio, E.L, Christianson, D.W. Deposit date: 2011-08-19 Release date: 2011-09-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystal structures of complexes with cobalt-reconstituted human arginase I. Biochemistry, 50, 2011
3THH	Crystal structure of the Co2+2-HAI-ABH complex Descriptor: 2(S)-AMINO-6-BORONOHEXANOIC ACID, Arginase-1, COBALT (II) ION Authors: D'Antonio, E.L, Christianson, D.W. Deposit date: 2011-08-19 Release date: 2011-09-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Crystal structures of complexes with cobalt-reconstituted human arginase I. Biochemistry, 50, 2011
2R2T	d(ATTTAGTTAACTAAAT) complexed with MMLV RT catalytic fragment Descriptor: DNA (5'-D(*DAP*DTP*DTP*DTP*DAP*DGP*DTP*DT)-3'), DNA (5'-D(P*DAP*DAP*DCP*DTP*DAP*DAP*DAP*DT)-3'), Reverse transcriptase Authors: Goodwin, K.D, Lewis, M.A, Long, E.C, Georgiadis, M.M. Deposit date: 2007-08-27 Release date: 2008-07-22 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of DNA-bound Co(III) bleomycin B2: Insights on intercalation and minor groove binding. Proc.Natl.Acad.Sci.Usa, 105, 2008
1S9S	SOLUTION STRUCTURE OF MLV PSI SITE Descriptor: MLV Psi encapsidation site Authors: D'Souza, V, Dey, A, Habib, D, Summers, M.F. Deposit date: 2004-02-05 Release date: 2004-04-06 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: NMR structure of the 101-nucleotide core encapsidation signal of the Moloney Murine Leukemia Virus. J.Mol.Biol., 337, 2004
2I22	Crystal structure of Escherichia coli phosphoheptose isomerase in complex with reaction substrate sedoheptulose 7-phosphate Descriptor: D-ALTRO-HEPT-2-ULOSE 7-PHOSPHATE, Phosphoheptose isomerase Authors: Blakely, K, Zhang, K, DeLeon, G, Wright, G, Junop, M. Deposit date: 2006-08-15 Release date: 2007-08-21 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structure and Function of Sedoheptulose-7-phosphate Isomerase, a Critical Enzyme for Lipopolysaccharide Biosynthesis and a Target for Antibiotic Adjuvants J.Biol.Chem., 283, 2008
1U29	Triglycine variant of the ARNO Pleckstrin Homology Domain in complex with Ins(1,4,5)P3 Descriptor: Cytohesin 2, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE Authors: Cronin, T.C, DiNitto, J.P, Czech, M.P, Lambright, D.G. Deposit date: 2004-07-16 Release date: 2005-02-01 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural determinants of phosphoinositide selectivity in splice variants of Grp1 family PH domains Embo J., 23, 2004
2D4Q	Crystal structure of the Sec-PH domain of the human neurofibromatosis type 1 protein Descriptor: Neurofibromin, OXTOXYNOL-10, PYROPHOSPHATE 2- Authors: D'angelo, I, Welti, S, Bonneau, F, Scheffzek, K. Deposit date: 2005-10-22 Release date: 2006-03-07 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.3 Å) Cite: A novel bipartite phospholipid-binding module in the neurofibromatosis type 1 protein Embo Rep., 7, 2006

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