PDB: 224572 resultsInfo pagesStatus searchChemie searchBIRD

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1YOW	human Steroidogenic Factor 1 LBD with bound Co-factor Peptide Descriptor: PHOSPHATIDYL ETHANOL, Steroidogenic factor 1, TIF2 peptide Authors: Krylova, I.N, Sablin, E.P, Xu, R.X, Waitt, G.M, Juzumiene, D, Williams, J.D, Ingraham, H.A, Willson, T.M, Williams, S.P, Montana, V, Madauss, K.P, Moore, J, Bynum, J.M, Lebedeva, L, MacKay, J.A, Suzawa, M, Guy, R.K, Thornton, J.W. Deposit date: 2005-01-28 Release date: 2005-05-10 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural analyses reveal phosphatidyl inositols as ligands for the NR5 orphan receptors SF-1 and LRH-1 Cell(Cambridge,Mass.), 120, 2005
1YOX	Structure of the conserved Protein of Unknown Function PA3696 from Pseudomonas aeruginosa Descriptor: hypothetical protein PA3696 Authors: Walker, J.R, Xu, X, Gu, J, Joachimiak, A, Edwards, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG) Deposit date: 2005-01-28 Release date: 2005-04-26 Last modified: 2017-10-11 Method: X-RAY DIFFRACTION (2.3 Å) Cite: X-ray structure of the conserved hypothetical protein PA3696 To be Published
1YOY	Predicted coding region AF1432 from Archaeoglobus Fulgidus Descriptor: hypothetical protein AF1432 Authors: Midwest Center for Structural Genomics (MCSG), Lunin, V.V, Savchenko, A, Joachimiak, A. Deposit date: 2005-01-28 Release date: 2005-02-08 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2 Å) Cite: The crystal structure of predicted coding region AF1432 from Archaeoglobus Fulgidus To be Published
1YOZ	Predicted coding region AF0941 from Archaeoglobus fulgidus Descriptor: Hypothetical protein AF0941 Authors: Lunin, V.V, Zhang, R, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) Deposit date: 2005-01-28 Release date: 2005-02-08 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2 Å) Cite: The crystal structure of predicted coding region AF0941 from Archaeoglobus fulgidus To be Published
1YP0	Structure of the steroidogenic factor-1 ligand binding domain bound to phospholipid and a SHP peptide motif Descriptor: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, Nuclear receptor subfamily 0, group B, ... Authors: Li, Y, Choi, M, Cavey, G, Daugherty, J, Suino, K, Kovach, A, Bingham, N, Kliewer, S, Xu, H. Deposit date: 2005-01-28 Release date: 2005-04-19 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystallographic identification and functional characterization of phospholipids as ligands for the orphan nuclear receptor steroidogenic factor-1. Mol.Cell, 17, 2005
1YP1	Crystal structure of a non-hemorrhagic fibrin(ogen)olytic metalloproteinase from venom of Agkistrodon acutus Descriptor: FII, KNL, ZINC ION Authors: Lou, Z, Hou, J, Chen, J, Liang, X, Qiu, P, Liu, Y, Li, M, Rao, Z. Deposit date: 2005-01-28 Release date: 2006-01-17 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of a non-hemorrhagic fibrin(ogen)olytic metalloproteinase complexed with a novel natural tri-peptide inhibitor from venom of Agkistrodon acutus J.Struct.Biol., 152, 2005
1YP2	Crystal structure of potato tuber ADP-glucose pyrophosphorylase Descriptor: Glucose-1-phosphate adenylyltransferase small subunit, PARA-MERCURY-BENZENESULFONIC ACID, SULFATE ION Authors: Jin, X, Ballicora, M.A, Preiss, J, Geiger, J.H. Deposit date: 2005-01-29 Release date: 2005-03-15 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.11 Å) Cite: Crystal structure of potato tuber ADP-glucose pyrophosphorylase. Embo J., 24, 2005
1YP3	Crystal structure of potato tuber ADP-glucose pyrophosphorylase in complex with ATP Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Glucose-1-phosphate adenylyltransferase small subunit, SULFATE ION Authors: Jin, X, Ballicora, M.A, Preiss, J, Geiger, J.H. Deposit date: 2005-01-29 Release date: 2005-03-15 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structure of potato tuber ADP-glucose pyrophosphorylase. Embo J., 24, 2005
1YP4	Crystal structure of potato tuber ADP-glucose pyrophosphorylase in complex with ADP-glucose Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE-GLUCOSE, Glucose-1-phosphate adenylyltransferase small subunit, ... Authors: Jin, X, Ballicora, M.A, Preiss, J, Geiger, J.H. Deposit date: 2005-01-29 Release date: 2005-03-15 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structure of potato tuber ADP-glucose pyrophosphorylase. Embo J., 24, 2005
1YP5	Yeast Myo5 SH3 domain, tetragonal crystal form Descriptor: Myosin-5 isoform Authors: Gonfloni, S, Kursula, P, Sacco, R, Cesareni, G, Wilmanns, M. Deposit date: 2005-01-29 Release date: 2006-01-17 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.68 Å) Cite: Yeast Myo5 SH3 domain, tetragonal crystal form To be Published
1YP6	Van der Waals Interactions Dominate Hydrophobic Association in a Protein Binding Site Occluded From Solvent Water Descriptor: 2-ISOBUTYL-3-METHOXYPYRAZINE, CADMIUM ION, CHLORIDE ION, ... Authors: Barratt, E, Bingham, R.J, Warner, D.J, Laughton, C.A, Phillips, S.E.V, Homans, S.W. Deposit date: 2005-01-30 Release date: 2005-08-30 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Van der Waals Interactions Dominate Ligand-Protein Association in a Protein Binding Site Occluded from Solvent Water J.Am.Chem.Soc., 127, 2005
1YP7	Van der Waals Interactions Dominate Hydrophobic Association in a Protein Binding Site Occluded From Solvent Water Descriptor: CADMIUM ION, MAJOR URINARY PROTEIN 1 Authors: Barratt, E, Bingham, R.J, Warner, D.J, Laughton, C.A, Phillips, S.E.V, Homans, S.W. Deposit date: 2005-01-30 Release date: 2005-08-30 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2 Å) Cite: Van der Waals Interactions Dominate Ligand-Protein Association in a Protein Binding Site Occluded from Solvent Water J.Am.Chem.Soc., 127, 2005
1YP8	Solution structure of the cyclotide tricyclon A Descriptor: tricyclon A Authors: Mulvenna, J.P, Sando, L, Craik, D.J. Deposit date: 2005-01-30 Release date: 2005-05-24 Last modified: 2022-03-02 Method: SOLUTION NMR Cite: Processing of a 22 kDa precursor protein to produce the circular protein tricyclon A. Structure, 13, 2005
1YP9	Trypsin Inhibitor Complex Descriptor: (1R,3AS,4R,8AS,8BR)-4-(2-BENZO[1,3]DIOXOL-5-YLMETHYL)-1-BENZYL-3-OXO-DECAHYDRO-PYRROLO[3,4-A]PYRROZILIN-4-YL-BENZAMIDINE, CALCIUM ION, Cationic trypsin, ... Authors: Fokkens, J, Obst-Sander, U, Heine, A, Diederich, F, Klebe, G. Deposit date: 2005-01-31 Release date: 2006-01-17 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.1 Å) Cite: A simple protocol to estimate differences in protein binding affinity for enantiomers without prior resolution of racemates Angew.Chem.Int.Ed.Engl., 45, 2006
1YPA	DIRECT OBSERVATION OF BETTER HYDRATION AT THE N-TERMINUS OF AN ALPHA-HELIX WITH GLYCINE RATHER THAN ALANINE AS N-CAP Descriptor: CHYMOTRYPSIN INHIBITOR 2 Authors: Harpaz, Y, Elmasry, N, Fersht, A.R, Henrick, K. Deposit date: 1993-01-10 Release date: 1994-01-31 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2 Å) Cite: Direct observation of better hydration at the N terminus of an alpha-helix with glycine rather than alanine as the N-cap residue. Proc.Natl.Acad.Sci.USA, 91, 1994
1YPB	DIRECT OBSERVATION OF BETTER HYDRATION AT THE N-TERMINUS OF AN ALPHA-HELIX WITH GLYCINE RATHER THAN ALANINE AS N-CAP Descriptor: CHYMOTRYPSIN INHIBITOR 2 Authors: Harpaz, Y, Elmasry, N, Fersht, A.R, Henrick, K. Deposit date: 1993-01-10 Release date: 1994-01-31 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2 Å) Cite: Direct observation of better hydration at the N terminus of an alpha-helix with glycine rather than alanine as the N-cap residue. Proc.Natl.Acad.Sci.USA, 91, 1994
1YPC	DIRECT OBSERVATION OF BETTER HYDRATION AT THE N-TERMINUS OF AN ALPHA-HELIX WITH GLYCINE RATHER THAN ALANINE AS N-CAP Descriptor: CHYMOTRYPSIN INHIBITOR 2 Authors: Harpaz, Y, Elmasry, N, Fersht, A.R, Henrick, K. Deposit date: 1993-01-10 Release date: 1994-01-31 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Direct observation of better hydration at the N terminus of an alpha-helix with glycine rather than alanine as the N-cap residue. Proc.Natl.Acad.Sci.USA, 91, 1994
1YPE	Thrombin Inhibitor Complex Descriptor: (1R,3AS,4R,8AS,8BR)-4-(2-BENZO[1,3]DIOXOL-5-YLMETHYL-1-ETHYL-3-OXO-DECAHYDRO-PYRROLO[3,4-A]PYRROLIZIN-4-YL)-BENZAMIDINE, GLYCEROL, Hirudin, ... Authors: Fokkens, J, Obst-Sander, U, Heine, A, Diederich, F, Klebe, G. Deposit date: 2005-01-31 Release date: 2006-01-17 Last modified: 2017-10-11 Method: X-RAY DIFFRACTION (1.81 Å) Cite: A simple protocol to estimate differences in protein binding affinity for enantiomers without prior resolution of racemates Angew.Chem.Int.Ed.Engl., 45, 2006
1YPF	Crystal Structure of GuaC (BA5705) from Bacillus anthracis at 1.8 A Resolution Descriptor: GMP reductase Authors: Grenha, R, Levdikov, V.M, Blagova, E.V, Fogg, M.J, Brannigan, J.A, Wilkinson, A.J, Wilson, K.S, Structural Proteomics in Europe (SPINE) Deposit date: 2005-01-31 Release date: 2006-02-14 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal Structure of GuaC (BA5705) from Bacillus anthracis at 1.8 A Resolution. To be Published
1YPG	Thrombin Inhibitor Complex Descriptor: (1R,3AS,4R,8AS,8BR)-4-(2-BENZO[1,3]DIOXOL-5-YL-1-CYCLOPROPYL-3-OXO-DECAHYDRO-PYRROLO[3,4-A]PYRROLIZIN-4-YL)-BENZAMIDINE, Hirudin, Thrombin heavy chain, ... Authors: Fokkens, J, Obst-Sander, U, Heine, A, Diederich, F, Klebe, G. Deposit date: 2005-01-31 Release date: 2006-01-17 Last modified: 2017-10-11 Method: X-RAY DIFFRACTION (1.8 Å) Cite: A simple protocol to estimate differences in protein binding affinity for enantiomers without prior resolution of racemates Angew.Chem.Int.Ed.Engl., 45, 2006
1YPH	High resolution structure of bovine alpha-chymotrypsin Descriptor: CHYMOTRYPSIN A, chain A, chain B, ... Authors: Razeto, A, Galunsky, B, Kasche, V, Wilson, K.S, Lamzin, V.S. Deposit date: 2005-01-31 Release date: 2006-02-14 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.34 Å) Cite: High resolution structure of native bovine alpha-chymotrypsin To be Published
1YPI	STRUCTURE OF YEAST TRIOSEPHOSPHATE ISOMERASE AT 1.9-ANGSTROMS RESOLUTION Descriptor: TRIOSEPHOSPHATE ISOMERASE Authors: Alber, T, Lolis, E, Petsko, G.A. Deposit date: 1990-01-12 Release date: 1991-01-15 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structure of yeast triosephosphate isomerase at 1.9-A resolution. Biochemistry, 29, 1990
1YPJ	Thrombin Inhibitor Complex Descriptor: (1R,3AS,4R,8AS,8BR)-4-{5-(PHENYL[1,3]DIOXOL-5-YLMETHYL)-4-ETHYL-2,3,3-TRIMETHYL-6-OXO-OCTAHYDRO-PYRROLO[3,4-C]PYRROL-1-YL}-BENZAMIDINE, Hirudin, Thrombin heavy chain, ... Authors: Fokkens, J, Obst-Sander, U, Heine, A, Diederich, F, Klebe, G. Deposit date: 2005-01-31 Release date: 2006-01-17 Last modified: 2017-10-11 Method: X-RAY DIFFRACTION (1.78 Å) Cite: A simple protocol to estimate differences in protein binding affinity for enantiomers without prior resolution of racemates Angew.Chem.Int.Ed.Engl., 45, 2006
1YPK	Thrombin Inhibitor Complex Descriptor: 10-mer peptide from Acety-Hirudin(54-65) sulfated, Prothrombin heavy chain, Prothrombin light chain, ... Authors: Czodrowski, P, Sotriffer, C, Fokkens, J, Heine, A, Klebe, G. Deposit date: 2005-01-31 Release date: 2006-01-17 Last modified: 2017-10-11 Method: X-RAY DIFFRACTION (1.78 Å) Cite: A Simple Protocol To Estimate Differences in Protein Binding Affinity for Enantiomers without Prior Resolution of Racemates Angew.Chem.Int.Ed.Engl., 45, 2006
1YPL	X-ray crystal structure of thrombin inhibited by synthetic cyanopeptide analogue RA-1008 Descriptor: GLYCEROL, Hirudin, N-(BENZYLSULFONYL)-L-LEUCYL-N-(4-{[AMINO(IMINO)METHYL]AMINO}BUTYL)-L-PROLINAMIDE, ... Authors: Fokkens, J, Radau, G. Deposit date: 2005-01-31 Release date: 2006-01-17 Last modified: 2017-10-11 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Design and X-ray crystal structures of human thrombin with synthetic cyanopeptide-analogues. Pharmazie, 62, 2007

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