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6WDA
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BU of 6wda by Molmil
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Loveland, A.B, Demo, G, Korostelev, A.A.
Deposit date:2020-03-31
Release date:2020-07-08
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading.
Nature, 584, 2020
1CDJ
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BU of 1cdj by Molmil
STRUCTURE OF T-CELL SURFACE GLYCOPROTEIN CD4
Descriptor: T-CELL SURFACE GLYCOPROTEIN CD4
Authors:Wu, H, Myszka, D, Tendian, S.W, Brouillette, C.G, Sweet, R.W, Chaiken, I.M, Hendrickson, W.A.
Deposit date:1996-11-11
Release date:1997-04-01
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Kinetic and structural analysis of mutant CD4 receptors that are defective in HIV gp120 binding.
Proc.Natl.Acad.Sci.USA, 93, 1996
1C57
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BU of 1c57 by Molmil
DIRECT DETERMINATION OF THE POSITIONS OF DEUTERIUM ATOMS OF BOUND WATER IN CONCANAVALIN A BY NEUTRON LAUE CRYSTALLOGRAPHY
Descriptor: CALCIUM ION, Concanavalin-Br, MANGANESE (II) ION
Authors:Habash, J, Raftery, J, Nuttall, R, Price, H.J, Lehmann, M.S, Wilkinson, C, Kalb, A.J, Helliwell, J.R.
Deposit date:1999-10-26
Release date:2000-05-08
Last modified:2023-12-27
Method:NEUTRON DIFFRACTION (2.4 Å)
Cite:Direct determination of the positions of the deuterium atoms of the bound water in -concanavalin A by neutron Laue crystallography.
Acta Crystallogr.,Sect.D, 56, 2000
6WDI
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BU of 6wdi by Molmil
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Loveland, A.B, Demo, G, Korostelev, A.A.
Deposit date:2020-03-31
Release date:2020-07-01
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading.
Nature, 584, 2020
1C4X
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BU of 1c4x by Molmil
2-HYDROXY-6-OXO-6-PHENYLHEXA-2,4-DIENOATE HYDROLASE (BPHD) FROM RHODOCOCCUS SP. STRAIN RHA1
Descriptor: PROTEIN (2-HYDROXY-6-OXO-6-PHENYLHEXA-2,4-DIENOATE HYDROLASE)
Authors:Nandhagopal, N, Senda, T, Mitsui, Y.
Deposit date:1999-09-30
Release date:1999-10-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Three-Dimensional Structure of Microbial 2-Hydroxyl-6-Oxo-6-Phenylhexa-2,4- Dienoic Acid (Hpda) Hydrolase (Bphd Enzyme) from Rhodococcus Sp. Strain Rha1, in the Pcb Degradation Pathway
Proc.Jpn.Acad.,Ser.B, 73, 1997
1C7I
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BU of 1c7i by Molmil
THERMOPHYLIC PNB ESTERASE
Descriptor: CALCIUM ION, PROTEIN (PARA-NITROBENZYL ESTERASE)
Authors:Spiller, B, Gershenson, A, Arnold, F, Stevens, R.
Deposit date:2000-02-21
Release date:2000-03-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:A structural view of evolutionary divergence.
Proc.Natl.Acad.Sci.USA, 96, 1999
1C8K
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BU of 1c8k by Molmil
FLAVOPIRIDOL INHIBITS GLYCOGEN PHOSPHORYLASE BY BINDING AT THE INHIBITOR SITE
Descriptor: 2-(2-CHLORO-PHENYL)-5,7-DIHYDROXY-8-(3-HYDROXY-1-METHYL-PIPERIDIN-4-YL)-4H-BENZOPYRAN-4-ONE, PROTEIN (GLYCOGEN PHOSPHORYLASE), PYRIDOXAL-5'-PHOSPHATE
Authors:Oikonomakos, N.G, Zographos, S.E, Skamnaki, V.T, Tsitsanou, K.E, Johnson, L.N.
Deposit date:2000-05-11
Release date:2000-05-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Flavopiridol inhibits glycogen phosphorylase by binding at the inhibitor site.
J.Biol.Chem., 275, 2000
6WD8
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BU of 6wd8 by Molmil
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Loveland, A.B, Demo, G, Korostelev, A.A.
Deposit date:2020-03-31
Release date:2020-07-08
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading.
Nature, 584, 2020
1C8X
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BU of 1c8x by Molmil
Endo-Beta-N-Acetylglucosaminidase H, D130E Mutant
Descriptor: ENDO-BETA-N-ACETYLGLUCOSAMINIDASE H, PHOSPHATE ION
Authors:Rao, V, Tao, C, Guan, C, Van Roey, P.
Deposit date:1999-07-30
Release date:1999-11-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mutations of endo-beta-N-acetylglucosaminidase H active site residues Asp130 and Glu132: activities and conformations.
Protein Sci., 8, 1999
1CAD
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BU of 1cad by Molmil
X-RAY CRYSTAL STRUCTURES OF THE OXIDIZED AND REDUCED FORMS OF THE RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
Descriptor: FE (III) ION, RUBREDOXIN
Authors:Day, M.W, Hsu, B.T, Joshua-Tor, L, Park, J.B, Zhou, Z.H, Adams, M.W.W, Rees, D.C.
Deposit date:1992-05-18
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
1C5H
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BU of 1c5h by Molmil
HYDROGEN BONDING AND CATALYSIS: AN UNEXPECTED EXPLANATION FOR HOW A SINGLE AMINO ACID SUBSTITUTION CAN CHANGE THE PH OPTIMUM OF A GLYCOSIDASE
Descriptor: ENDO-1,4-BETA-XYLANASE
Authors:Joshi, M.D, Sidhu, G, Pot, I, Brayer, G.D, Withers, S.G, Mcintosh, L.P.
Deposit date:1999-11-24
Release date:2000-05-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Hydrogen bonding and catalysis: a novel explanation for how a single amino acid substitution can change the pH optimum of a glycosidase.
J.Mol.Biol., 299, 2000
1C5B
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BU of 1c5b by Molmil
DECARBOXYLASE CATALYTIC ANTIBODY 21D8 UNLIGANDED FORM
Descriptor: CHIMERIC DECARBOXYLASE ANTIBODY 21D8
Authors:Hotta, K, Wilson, I.A.
Deposit date:1999-11-08
Release date:2000-10-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Catalysis of decarboxylation by a preorganized heterogeneous microenvironment: crystal structures of abzyme 21D8.
J.Mol.Biol., 302, 2000
1CC2
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BU of 1cc2 by Molmil
CHOLESTEROL OXIDASE FROM STREPTOMYCES HIS447GLN MUTANT
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PROTEIN (CHOLESTEROL OXIDASE)
Authors:Vrielink, A, Yue, Q.K.
Deposit date:1999-03-03
Release date:1999-03-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure determination of cholesterol oxidase from Streptomyces and structural characterization of key active site mutants.
Biochemistry, 38, 1999
6WM4
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BU of 6wm4 by Molmil
Human V-ATPase in state 3 with SidK and ADP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, Renin receptor, ...
Authors:Wang, L, Wu, H, Fu, T.M.
Deposit date:2020-04-20
Release date:2020-11-11
Last modified:2020-11-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structures of a Complete Human V-ATPase Reveal Mechanisms of Its Assembly.
Mol.Cell, 80, 2020
8OSQ
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BU of 8osq by Molmil
Why does the herpes simplex 1 virus-encoded UL49.5 protein fail to inhibit the TAP-dependent antigen presentation?
Descriptor: Envelope glycoprotein N
Authors:Zhukov, I, Krupa, P, Karska, N, Rodziewicz-Motowidlo, S, Lipinska, A.D.
Deposit date:2023-04-19
Release date:2024-05-01
Method:SOLUTION NMR
Cite:Why doesn't the UL49.5 protein from HSV-1 virus inhibit the TAP antigen presentation pathway?
To Be Published
1CDW
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BU of 1cdw by Molmil
HUMAN TBP CORE DOMAIN COMPLEXED WITH DNA
Descriptor: DNA (5'-D(*CP*AP*GP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*CP*AP*G)-3'), DNA (5'-D(*CP*TP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*CP*TP*G)-3'), PROTEIN (TATA BINDING PROTEIN (TBP))
Authors:Nikolov, D.B, Chen, H, Halay, E.D, Hoffmann, A, Roeder, R.G, Burley, S.K.
Deposit date:1996-04-11
Release date:1996-12-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a human TATA box-binding protein/TATA element complex.
Proc.Natl.Acad.Sci.USA, 93, 1996
1C5K
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BU of 1c5k by Molmil
THE STRUCTURE OF TOLB, AN ESSENTIAL COMPONENT OF THE TOL-DEPENDENT TRANSLOCATION SYSTEM AND ITS INTERACTIONS WITH THE TRANSLOCATION DOMAIN OF COLICIN E9
Descriptor: PROTEIN (TOLB PROTEIN), YTTERBIUM (III) ION
Authors:Carr, S, Penfold, C.N, Bamford, V, James, R, Hemmings, A.M.
Deposit date:1999-12-05
Release date:2000-12-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of TolB, an essential component of the tol-dependent translocation system, and its protein-protein interaction with the translocation domain of colicin E9.
Structure Fold.Des., 8, 2000
8OUI
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BU of 8oui by Molmil
Complex of ASCT2 with Suppressyn
Descriptor: ALANINE, Neutral amino acid transporter B(0), Suppressyn
Authors:Khare, S, Kumar, A, Reyes, N.
Deposit date:2023-04-23
Release date:2024-05-01
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Receptor-recognition and antiviral mechanisms of retrovirus-derived human proteins.
Nat.Struct.Mol.Biol., 31, 2024
1C6R
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BU of 1c6r by Molmil
CRYSTAL STRUCTURE OF REDUCED CYTOCHROME C6 FROM THE GREEN ALGAE SCENEDESMUS OBLIQUUS
Descriptor: CADMIUM ION, CYTOCHROME C6, PROTOPORPHYRIN IX CONTAINING FE
Authors:Schnackenberg, J, Than, M.E, Mann, K, Wiegand, G, Huber, R, Reuter, W.
Deposit date:1999-04-06
Release date:2000-04-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Amino acid sequence, crystallization and structure determination of reduced and oxidized cytochrome c6 from the green alga Scenedesmus obliquus.
J.Mol.Biol., 290, 1999
1CBY
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BU of 1cby by Molmil
DELTA-ENDOTOXIN
Descriptor: DELTA-ENDOTOXIN CYTB
Authors:Li, J.
Deposit date:1995-09-05
Release date:1996-10-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the mosquitocidal delta-endotoxin CytB from Bacillus thuringiensis sp. kyushuensis and implications for membrane pore formation.
J.Mol.Biol., 257, 1996
1C7G
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BU of 1c7g by Molmil
TYROSINE PHENOL-LYASE FROM ERWINIA HERBICOLA
Descriptor: PYRIDOXAL-5'-PHOSPHATE, TYROSINE PHENOL-LYASE
Authors:Mikami, B, Yamamoto, Y, Katayama, T, Suzuki, H.
Deposit date:2000-02-18
Release date:2003-12-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structure of Tyrosine Phenol-Lyase from Erwinia Herbicola
To be Published
8P09
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BU of 8p09 by Molmil
48S late-stage initiation complex with non methylated mRNA
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Guca, E, Lima, L.H.F, Boissier, F, Hashem, Y.
Deposit date:2023-05-09
Release date:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:N 6 -methyladenosine in 5' UTR does not promote translation initiation.
Mol.Cell, 84, 2024
8P03
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BU of 8p03 by Molmil
48S late-stage initiation complex with m6A mRNA
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Guca, E, Lima, L.H.F, Boissier, F, Hashem, Y.
Deposit date:2023-05-09
Release date:2024-03-20
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:N 6 -methyladenosine in 5' UTR does not promote translation initiation.
Mol.Cell, 84, 2024
1C83
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BU of 1c83 by Molmil
CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE 1B COMPLEXED WITH 6-(OXALYL-AMINO)-1H-INDOLE-5-CARBOXYLIC ACID
Descriptor: 6-(OXALYL-AMINO)-1H-INDOLE-5-CARBOXYLIC ACID, PROTEIN (PROTEIN-TYROSINE PHOSPHATASE 1B)
Authors:Andersen, H.S, Iversen, L.F, Branner, S, Rasmussen, H.B, Moller, N.P.
Deposit date:2000-04-14
Release date:2000-05-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:2-(oxalylamino)-benzoic acid is a general, competitive inhibitor of protein-tyrosine phosphatases.
J.Biol.Chem., 275, 2000
8P2F
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BU of 8p2f by Molmil
Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state
Descriptor: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 2-[(3~{R},4~{S},5~{S},8~{S},9~{S},10~{S},11~{R},13~{S},14~{S},16~{S})-16-acetyloxy-4,8,10,14-tetramethyl-3,11-bis(oxidanyl)-1,2,3,4,5,6,7,9,11,12,13,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]-5-cyclopentyl-pentanoic acid, ...
Authors:Gonzalez-Lopez, A, Selmer, M.
Deposit date:2023-05-16
Release date:2024-05-01
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.44 Å)
Cite:Structures of the Staphylococcus aureus ribosome inhibited by fusidic acid and fusidic acid cyclopentane.
Sci Rep, 14, 2024

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