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6NM5
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BU of 6nm5 by Molmil
F-pilus/MS2 Maturation protein complex
Descriptor: (2R)-2,3-dihydroxypropyl ethyl hydrogen (S)-phosphate, Maturation protein, Type IV conjugative transfer system pilin TraA
Authors:Meng, R, Chang, J, Zhang, J.
Deposit date:2019-01-10
Release date:2019-07-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Structural basis for the adsorption of a single-stranded RNA bacteriophage.
Nat Commun, 10, 2019
8SW4
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BU of 8sw4 by Molmil
BG505 GT1.1 SOSIP in complex with NHP Fabs 21N13, 21M20 and RM20A3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 21M20 heavy chain variable region, ...
Authors:Ozorowski, G, Torres, J.L, Zhang, S, Ward, A.B.
Deposit date:2023-05-17
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Neutralizing antibodies induced in non-human primates by germline targeting Env trimer
To Be Published
8SFG
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BU of 8sfg by Molmil
Crystal Structure of the Open Unbound Catalytically Inactive Makes Caterpillars Floppy-like (MCF) Effector from Vibrio vulnificus CMCP6
Descriptor: Autotransporter adhesin, CHLORIDE ION, SULFATE ION
Authors:Minasov, G, Shuvalova, L, Rosas-Lemus, M, Herrera, A, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2023-04-11
Release date:2024-06-05
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of the Open Unbound Catalytically Inactive Makes Caterpillars Floppy-like (MCF) Effector from Vibrio vulnificus CMCP6.
To Be Published
1DC1
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BU of 1dc1 by Molmil
RESTRICTION ENZYME BSOBI/DNA COMPLEX STRUCTURE: ENCIRCLEMENT OF THE DNA AND HISTIDINE-CATALYZED HYDROLYSIS WITHIN A CANONICAL RESTRICTION ENZYME FOLD
Descriptor: 1,4-DIETHYLENE DIOXIDE, BSOBI RESTRICTION ENDONUCLEASE, DNA (5'-D(*T*AP*TP*AP*CP*TP*CP*GP*AP*GP*TP*AP*T)-3')
Authors:van der Woerd, M.J, Pelletier, J.J, Xu, S.-Y, Friedman, A.M.
Deposit date:1999-11-04
Release date:2001-02-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Restriction enzyme BsoBI-DNA complex: a tunnel for recognition of degenerate DNA sequences and potential histidine catalysis.
Structure, 9, 2001
8S1U
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BU of 8s1u by Molmil
YlmH bound to stalled 50S subunits with RqcH and PtRNA
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Paternoga, H, Wilson, D.N.
Deposit date:2024-02-16
Release date:2024-06-12
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:A role for the S4-domain containing protein YlmH in ribosome-associated quality control in Bacillus subtilis.
Nucleic Acids Res., 52, 2024
8S1P
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BU of 8s1p by Molmil
YlmH bound to PtRNA-50S
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Paternoga, H, Dimitrova-Paternoga, L, Wilson, D.N.
Deposit date:2024-02-15
Release date:2024-06-12
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (1.96 Å)
Cite:A role for the S4-domain containing protein YlmH in ribosome-associated quality control in Bacillus subtilis.
Nucleic Acids Res., 52, 2024
8RT4
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BU of 8rt4 by Molmil
O-layer structure (TrwH/VirB7, TrwF/VirB9CTD, TrwE/VirB10CTD) of the outer membrane core complex from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Descriptor: TrwE protein, TrwF protein, TrwH protein
Authors:Mace, K, Waksman, G.
Deposit date:2024-01-25
Release date:2024-06-19
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (2.46 Å)
Cite:Cryo-EM structure of a conjugative type IV secretion system suggests a molecular switch regulating pilus biogenesis.
Embo J., 43, 2024
8RQ6
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BU of 8rq6 by Molmil
Solution NMR structure of Amyloid beta precursor like protein 2 TMD
Descriptor: Amyloid beta precursor like protein 2
Authors:Muhle-Goll, C, Moser, C.
Deposit date:2024-01-17
Release date:2024-06-26
Method:SOLUTION NMR
Cite:Substrate Selection Criteria in Regulated Intramembrane Proteolysis.
Acs Chem Neurosci, 15, 2024
6NCL
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BU of 6ncl by Molmil
Near-atomic structure of icosahedrally averaged PBCV-1 capsid
Descriptor: Major capsid protein, P1, P10, ...
Authors:Fang, Q, Rossmann, M.G.
Deposit date:2018-12-11
Release date:2019-01-30
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Near-atomic structure of a giant virus.
Nat Commun, 10, 2019
7QNM
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BU of 7qnm by Molmil
Crystallization and structural analyses of ZgHAD, a L-2-haloacid dehalogenase from the marine Flavobacterium Zobellia galactanivorans
Descriptor: (S)-2-haloacid dehalogenase, PHOSPHATE ION
Authors:Grigorian, E, Roret, T, Leblanc, C, Delage, L, Czjzek, M.
Deposit date:2021-12-21
Release date:2022-12-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:X-ray structure and mechanism of ZgHAD, a l-2-haloacid dehalogenase from the marine Flavobacterium Zobellia galactanivorans.
Protein Sci., 32, 2023
8HFE
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BU of 8hfe by Molmil
Cryo-EM structure of human norepinephrine transporter NET in an inward-open state at resolution of 2.5 angstrom
Descriptor: CHLORIDE ION, Sodium-dependent noradrenaline transporter
Authors:Tan, J, Xiao, Y, Kong, F, Lei, J, Yuan, Y, Yan, C.
Deposit date:2022-11-10
Release date:2024-05-15
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Molecular basis of human noradrenaline transporter reuptake and inhibition.
Nature, 2024
8RPQ
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BU of 8rpq by Molmil
Solution NMR structure of Integrin beta-1 TMD
Descriptor: Integrin beta-1
Authors:Muhle-Goll, C, Moser, C.
Deposit date:2024-01-16
Release date:2024-06-26
Method:SOLUTION NMR
Cite:Substrate Selection Criteria in Regulated Intramembrane Proteolysis.
Acs Chem Neurosci, 15, 2024
8HFF
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BU of 8hff by Molmil
Cryo-EM structure of human norepinephrine transporter NET in the presence of norepinephrine in an inward-open state at resolution of 2.9 angstrom.
Descriptor: L-NOREPINEPHRINE, Sodium-dependent noradrenaline transporter
Authors:Tan, J, Xiao, Y, Kong, F, Lei, J, Yuan, Y, Yan, C.
Deposit date:2022-11-10
Release date:2024-05-15
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Molecular basis of human noradrenaline transporter reuptake and inhibition.
Nature, 2024
8RUJ
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BU of 8ruj by Molmil
Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and ARN25850 after 1h soaking
Descriptor: 2-[2,6-bis(bromanyl)-3,4,5-tris(oxidanyl)phenyl]carbonyl-~{N}-(2-pyrrolidin-1-ylethyl)-1-benzofuran-5-carboxamide, Domains 1-5, MAGNESIUM ION, ...
Authors:Silvestri, I, Marcia, M.
Deposit date:2024-01-30
Release date:2024-06-19
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Targeting the conserved active site of splicing machines with specific and selective small molecule modulators.
Nat Commun, 15, 2024
8HFL
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BU of 8hfl by Molmil
Cryo-EM structure of human norepinephrine transporter NET in the presence of the antidepressant bupropion in an inward-open state at resolution of 3.0 angstrom.
Descriptor: Bupropion, CHLORIDE ION, Sodium-dependent noradrenaline transporter
Authors:Tan, J, Xiao, Y, Kong, F, Lei, J, Yuan, Y, Yan, C.
Deposit date:2022-11-11
Release date:2024-05-15
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular basis of human noradrenaline transporter reuptake and inhibition.
Nature, 2024
8RUI
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BU of 8rui by Molmil
Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 1h soaking
Descriptor: Domains 1-5, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Silvestri, I, Marcia, M.
Deposit date:2024-01-30
Release date:2024-06-19
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Targeting the conserved active site of splicing machines with specific and selective small molecule modulators.
Nat Commun, 15, 2024
8RT6
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BU of 8rt6 by Molmil
Conformation-A of the full-length outer membrane core complex (TrwH/VirB7, TrwF/VirB9, TrwE/VirB10CTD) from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Descriptor: TrwE protein, TrwF protein, TrwH protein
Authors:Mace, K, Waksman, G.
Deposit date:2024-01-25
Release date:2024-06-19
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Cryo-EM structure of a conjugative type IV secretion system suggests a molecular switch regulating pilus biogenesis.
Embo J., 43, 2024
1DII
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BU of 1dii by Molmil
CRYSTAL STRUCTURE OF P-CRESOL METHYLHYDROXYLASE AT 2.5 A RESOLUTION
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, HEME C, ...
Authors:Cunane, L.M, Chen, Z.W, Shamala, N, Mathews, F.S, Cronin, C.N, McIntire, W.S.
Deposit date:1999-11-29
Release date:1999-12-08
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of the flavocytochrome p-cresol methylhydroxylase and its enzyme-substrate complex: gated substrate entry and proton relays support the proposed catalytic mechanism.
J.Mol.Biol., 295, 2000
8RT8
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BU of 8rt8 by Molmil
Conformation-C of the full-length outer membrane core complex (TrwH/VirB7, TrwF/VirB9, TrwE/VirB10CTD) from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Descriptor: TrwE protein, TrwF protein, TrwH protein
Authors:Mace, K, Waksman, G.
Deposit date:2024-01-25
Release date:2024-06-19
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Cryo-EM structure of a conjugative type IV secretion system suggests a molecular switch regulating pilus biogenesis.
Embo J., 43, 2024
8H10
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BU of 8h10 by Molmil
Structure of SARS-CoV-1 Spike Protein with Engineered x1 Disulfide (S370C and D967C), Locked-2 Conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
Authors:Zhang, X, Li, Z, Liu, Y, Wang, J, Fu, L, Wang, P, He, J, Xiong, X.
Deposit date:2022-09-30
Release date:2022-10-19
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Disulfide stabilization reveals conserved dynamic features between SARS-CoV-1 and SARS-CoV-2 spikes.
Life Sci Alliance, 6, 2023
8H14
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BU of 8h14 by Molmil
Structure of SARS-CoV-1 Spike Protein with Engineered x3 Disulfide (D414C and V969C), Locked-1 Conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, LINOLEIC ACID, Spike glycoprotein
Authors:Zhang, X, Li, Z, Liu, Y, Wang, J, Fu, L, Wang, P, He, J, Xiong, X.
Deposit date:2022-09-30
Release date:2022-10-19
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Disulfide stabilization reveals conserved dynamic features between SARS-CoV-1 and SARS-CoV-2 spikes.
Life Sci Alliance, 6, 2023
6NLM
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BU of 6nlm by Molmil
1.90 A resolution structure of WT BfrB from Pseudomonas aeruginosa in complex with a protein-protein interaction inhibitor (analog 15)
Descriptor: 4-{[3-(4-hydroxy-2-methoxyphenyl)propyl]amino}-1H-isoindole-1,3(2H)-dione, FE (II) ION, Ferroxidase, ...
Authors:Lovell, S, Punchi-Hewage, A, Battaile, K.P, Yao, H, Nammalwar, B, Gnanasekaran, K.K, Bunce, R.A, Reitz, A.B, Rivera, M.
Deposit date:2019-01-08
Release date:2019-05-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Small Molecule Inhibitors of the BfrB-Bfd Interaction Decrease Pseudomonas aeruginosa Fitness and Potentiate Fluoroquinolone Activity.
J.Am.Chem.Soc., 141, 2019
6NLN
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BU of 6nln by Molmil
1.60 A resolution structure of WT BfrB from Pseudomonas aeruginosa in complex with a protein-protein interaction inhibitor (analog 16)
Descriptor: 4-{[3-(3-hydroxyphenyl)propyl]amino}-1H-isoindole-1,3(2H)-dione, FE (II) ION, Ferroxidase, ...
Authors:Lovell, S, Punchi-Hewage, A, Battaile, K.P, Yao, H, Nammalwar, B, Gnanasekaran, K.K, Bunce, R.A, Reitz, A.B, Rivera, M.
Deposit date:2019-01-08
Release date:2019-05-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Small Molecule Inhibitors of the BfrB-Bfd Interaction Decrease Pseudomonas aeruginosa Fitness and Potentiate Fluoroquinolone Activity.
J.Am.Chem.Soc., 141, 2019
8H11
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BU of 8h11 by Molmil
Structure of SARS-CoV-1 Spike Protein with Engineered x1 Disulfide (S370C and D967C), Closed Conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Zhang, X, Li, Z, Liu, Y, Wang, J, Fu, L, Wang, P, He, J, Xiong, X.
Deposit date:2022-09-30
Release date:2022-11-09
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Disulfide stabilization reveals conserved dynamic features between SARS-CoV-1 and SARS-CoV-2 spikes.
Life Sci Alliance, 6, 2023
8H0Z
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BU of 8h0z by Molmil
Structure of SARS-CoV-1 Spike Protein with Engineered x1 Disulfide (S370C and D967C), Locked-122 Conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
Authors:Zhang, X, Li, Z, Liu, Y, Wang, J, Fu, L, Wang, P, He, J, Xiong, X.
Deposit date:2022-09-30
Release date:2022-11-09
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Disulfide stabilization reveals conserved dynamic features between SARS-CoV-1 and SARS-CoV-2 spikes.
Life Sci Alliance, 6, 2023

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