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PDB: 323 results

2AKR
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Structural basis of sulfatide presentation by mouse CD1d
Descriptor: (15Z)-N-((1S,2R,3E)-2-HYDROXY-1-{[(3-O-SULFO-BETA-D-GALACTOPYRANOSYL)OXY]METHYL}HEPTADEC-3-ENYL)TETRACOS-15-ENAMIDE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zajonc, D.M, Halder, R, Wu, D, Maricic, I, Roy, K, Wong, C.-H, Kumar, V, Wilson, I.A.
Deposit date:2005-08-03
Release date:2005-12-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for CD1d presentation of a sulfatide derived from myelin and its implications for autoimmunity
J.Exp.Med., 202, 2005
3VJ6
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BU of 3vj6 by Molmil
Structure of the MHC class Ib molecule Qa-1b
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-37 alpha chain, ...
Authors:Zeng, L, Clements, C.S, Rossjohn, J.
Deposit date:2011-10-12
Release date:2012-03-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A structural basis for antigen presentation by the MHC class Ib molecule, Qa-1b
J.Immunol., 188, 2012
3CC5
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BU of 3cc5 by Molmil
H-2Db complex with human gp100
Descriptor: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ...
Authors:Badia-Martinez, D, Achour, A.
Deposit date:2008-02-24
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Design of agonistic altered peptides for the robust induction of CTL directed towards H-2Db in complex with the melanoma-associated epitope gp100.
Cancer Res., 69, 2009
6I8C
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BU of 6i8c by Molmil
Crystal structure of the murine beta-2-microglobulin.
Descriptor: Beta-2-microglobulin, TRIETHYLENE GLYCOL
Authors:Achour, A, Sandalova, T, Ricagno, S, Sun, R.
Deposit date:2018-11-20
Release date:2019-10-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Biochemical and biophysical comparison of human and mouse beta-2 microglobulin reveals the molecular determinants of low amyloid propensity.
Febs J., 287, 2020
6MJJ
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BU of 6mjj by Molmil
Crystal structure of the mCD1d/xxm (JJ290) /iNKTCR ternary complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zajonc, D.M, Bitra, A, Janssens, J.
Deposit date:2018-09-21
Release date:2019-01-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:4"-O-Alkylated alpha-Galactosylceramide Analogues as iNKT-Cell Antigens: Synthetic, Biological, and Structural Studies.
ChemMedChem, 14, 2019
6C69
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BU of 6c69 by Molmil
Structure of glycolipid aGSA[12,6P] in complex with mouse CD1d
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
Authors:Zajonc, D.M, Wang, J.
Deposit date:2018-01-18
Release date:2019-01-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.937 Å)
Cite:A molecular switch in mouse CD1d modulates natural killer T cell activation by alpha-galactosylsphingamides.
J.Biol.Chem., 294, 2019
8D5J
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BU of 8d5j by Molmil
The complex of Pre-mRNA-Processing Factor 19 (Prpf19) neoantigen KYLQVASHV Presented by H2-Kd
Descriptor: Beta-2-microglobulin, MHC class I heavy chain maturation peptide H-2K(D), Pre-mRNA-processing factor 19
Authors:Custodio, J.M.F, Baker, B.M.
Deposit date:2022-06-04
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The complex of Pre-mRNA-Processing Factor 19 (Prpf19) neoantigen KYLQVASHV Presented by H2-Kd
To Be Published
5M00
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BU of 5m00 by Molmil
Crystal structure of murine P14 TCR complex with H-2Db and Y4A, modified gp33 peptide from LCMV
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-B alpha chain, ...
Authors:Achour, A, Sandalova, T, Sun, R, Han, X.
Deposit date:2016-10-03
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Thernary complexes of TCR P14 give insights into the mechanisms behind reestablishment of CTL responses against a viral escape mutant
To Be Published
5M01
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BU of 5m01 by Molmil
Crystal structure of murine P14 TCR/ H-2Db complex with PA, modified gp33 peptide from LCMV
Descriptor: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ...
Authors:Achour, A, Sandalova, T, Sun, R, Han, X.
Deposit date:2016-10-03
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Thernary complexes of TCR P14 give insights into the mechanisms behind reestablishment of CTL responses against a viral escape mutant
To Be Published
7JI2
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BU of 7ji2 by Molmil
Crystal Structure of H2-Kb in complex with a OVA mutant peptide
Descriptor: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ...
Authors:Li, X, Mallis, R.J, Mizsei, R, Tan, K, Reinherz, E.L, Wang, J.
Deposit date:2020-07-22
Release date:2020-12-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Pre-T cell receptors topologically sample self-ligands during thymocyte beta-selection.
Science, 371, 2021
2Q7Y
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BU of 2q7y by Molmil
Structure of the endogenous iNKT cell ligand iGb3 bound to mCD1d
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, ...
Authors:Zajonc, D.M, Wilson, I.A, Teyton, L.
Deposit date:2007-06-07
Release date:2008-04-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structures of Mouse CD1d-iGb3 Complex and its Cognate Valpha14 T Cell Receptor Suggest a Model for Dual Recognition of Foreign and Self Glycolipids.
J.Mol.Biol., 377, 2008
6CYW
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BU of 6cyw by Molmil
Structure of sphingomyelin in complex with mouse CD1d
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
Authors:Zajonc, D.M, Wang, J.
Deposit date:2018-04-06
Release date:2019-04-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Control of CD1d-restricted antigen presentation and inflammation by sphingomyelin.
Nat.Immunol., 20, 2019
5T7G
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BU of 5t7g by Molmil
Crystal Structure of Murine MHC-I H-2Dd in complex with Murine Beta2-Microglobulin and a Variant of Peptide (PT9) of HIV gp120 MN Isolate (IGPGRAFYT)
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
Authors:Jiang, J, Natarajan, K, Margulies, D.
Deposit date:2016-09-04
Release date:2017-10-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.961 Å)
Cite:Effects of Cross-Presentation, Antigen Processing, and Peptide Binding in HIV Evasion of T Cell Immunity.
J. Immunol., 200, 2018
5E8O
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BU of 5e8o by Molmil
The structure of the TEIPP associated altered peptide ligand Trh4-p2ABU in complex with H-2D(b)
Descriptor: Beta-2-microglobulin, Ceramide synthase 5, H-2 class I histocompatibility antigen, ...
Authors:Hafstrand, I, Doorduijn, E, Duru, A.D, Buratto, J, Oliveira, C.C, Sandalova, T, van Hall, T, Achour, A.
Deposit date:2015-10-14
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:The MHC Class I Cancer-Associated Neoepitope Trh4 Linked with Impaired Peptide Processing Induces a Unique Noncanonical TCR Conformer.
J Immunol., 196, 2016
3WS6
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BU of 3ws6 by Molmil
Crystal Structure of H-2D in complex with a mimotopic peptide
Descriptor: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ...
Authors:Kumar, P.R, Mukherjee, G, Samanta, D, DiLorenzo, T.P, Almo, S.C, Immune Function Network, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-02-28
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Compensatory mechanisms allow undersized anchor-deficient class I MHC ligands to mediate pathogenic autoreactive T cell responses
J. Immunol., 193, 2014
1S7S
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BU of 1s7s by Molmil
Crystal structures of the murine class I major histocompatibility complex H-2Kb in complex with LCMV-derived gp33 index peptide and three of its escape variants
Descriptor: Beta-2-microglobulin, Glycoprotein 9-residue peptide, H-2 class I histocompatibility antigen, ...
Authors:Velloso, L.M, Michaelsson, J, Ljunggren, H.G, Schneider, G, Achour, A.
Deposit date:2004-01-30
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Determination of structural principles underlying three different modes of lymphocytic choriomeningitis virus escape from CTL recognition.
J.Immunol., 172, 2004
1S7Q
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BU of 1s7q by Molmil
Crystal structures of the murine class I major histocompatibility complex H-2Kb in complex with LCMV-derived gp33 index peptide and three of its escape variants
Descriptor: Beta-2-microglobulin, Glycoprotein 9-residue peptide, H-2 class I histocompatibility antigen, ...
Authors:Velloso, L.M, Michaelsson, J, Ljunggren, H.G, Schneider, G, Achour, A.
Deposit date:2004-01-30
Release date:2004-05-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Determination of structural principles underlying three different modes of lymphocytic choriomeningitis virus escape from CTL recognition.
J.Immunol., 172, 2004
6E1I
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BU of 6e1i by Molmil
HLA-A*0201 single chain trimer with murine H2K alpha 3 domain and HPV.16 E7 peptide YMLDLQPET
Descriptor: HLA-A*0201 single chain trimer with murine H2K alpha 3 domain and HPV.16 E7 peptide YMLDLQPET
Authors:Finton, K.A.K, Rusnac, D.V.
Deposit date:2018-07-09
Release date:2019-07-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Effects of HLA single chain trimer design on peptide presentation and stability
To Be Published
1JUF
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BU of 1juf by Molmil
Structure of Minor Histocompatibility Antigen peptide, H13b, complexed to H2-Db
Descriptor: Beta-2-microglobulin, H13b peptide, H2-Db major histocompatibility antigen
Authors:Ostrov, D.A, Roden, M.M, Shi, W, Palmieri, E, Christianson, G.J, Mendoza, L, Villaflor, G, Tilley, D, Shastri, N, Grey, H, Almo, S.C, Roopenian, D.C, Nathenson, S.G.
Deposit date:2001-08-24
Release date:2002-03-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:How H13 histocompatibility peptides differing by a single methyl group and lacking conventional MHC binding anchor motifs determine self-nonself discrimination.
J.Immunol., 168, 2002
4HUU
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BU of 4huu by Molmil
Crystal Structure of H2Db-NPM6I
Descriptor: ACETATE ION, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
Authors:Gras, S, Twist, K.A, Rossjohn, J.
Deposit date:2012-11-04
Release date:2013-02-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Preemptive priming readily overcomes structure-based mechanisms of virus escape.
Proc.Natl.Acad.Sci.USA, 110, 2013
4HV8
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BU of 4hv8 by Molmil
Crystal Structure of H2Db-H155A-NPM6I
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-B alpha chain, ...
Authors:Gras, S, Twist, K.A, Rossjohn, J.
Deposit date:2012-11-05
Release date:2013-02-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Preemptive priming readily overcomes structure-based mechanisms of virus escape.
Proc.Natl.Acad.Sci.USA, 110, 2013
4PV9
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BU of 4pv9 by Molmil
Crystal Structure of H2Kb-Q600V complex
Descriptor: ACETATE ION, Beta-2-microglobulin, GLYCEROL, ...
Authors:Twist, K.-A, Rossjohn, J, Gras, S.
Deposit date:2014-03-15
Release date:2014-04-23
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional correlates of enhanced antiviral immunity generated by heteroclitic CD8 T cell epitopes.
J.Immunol., 192, 2014
3P9M
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BU of 3p9m by Molmil
Crystal Structure of H2-Kb in complex with a mutant of the chicken ovalbumin epitope OVA-G4
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, K-B alpha chain, ...
Authors:Wesselingh, R, Gras, S, Guillonneau, C, Turner, S.J, Rossjohn, J.
Deposit date:2010-10-18
Release date:2011-10-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Affinity thresholds for naive CD8+ CTL activation by peptides and engineered influenza A viruses
J.Immunol., 187, 2011
6C6H
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BU of 6c6h by Molmil
Structure of glycolipid aGSA[8,P5m] in complex with mouse CD1d
Descriptor: (5R,6S,7S)-5,6-dihydroxy-7-(octanoylamino)-N-(3-pentylphenyl)-8-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)te trahydro-2H-pyran-2-yl]oxy}octanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
Authors:Zajonc, D.M, Wang, J.
Deposit date:2018-01-18
Release date:2019-01-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:A molecular switch in mouse CD1d modulates natural killer T cell activation by alpha-galactosylsphingamides.
J.Biol.Chem., 294, 2019
3P9L
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BU of 3p9l by Molmil
Crystal Structure of H2-Kb in complex with the chicken ovalbumin epitope OVA
Descriptor: Beta-2-microglobulin, CALCIUM ION, H-2 class I histocompatibility antigen, ...
Authors:Wesselingh, R, Gras, S, Guillonneau, C, Turner, S.J, Rossjohn, J.
Deposit date:2010-10-18
Release date:2011-10-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Affinity thresholds for naive CD8+ CTL activation by peptides and engineered influenza A viruses
J.Immunol., 187, 2011

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