PDB: 141 件ウェブページステータス検索Chemie searchBIRD

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7DBO	DPBB domain of VCP-like ATPase from Thermoplasma acidophilum 分子名称: SULFATE ION, VCP-like ATPase 著者 Yagi, S, Tagami, S. 登録日 2020-10-21 公開日 2021-09-29 最終更新日 2021-11-17 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc., 143, 2021
7DG7	DPBB domain of VCP-like ATPase from Methanopyrus kandleri 分子名称: ATPase of the AAA+ class, IMIDAZOLE, ZINC ION 著者 Yagi, S, Tagami, S. 登録日 2020-11-11 公開日 2021-09-29 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.604 Å) 主引用文献 Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc., 143, 2021
7DG9	DPBB domain of VCP-like ATPase from Aeropyrum pernix 分子名称: Cell division control protein 48, AAA family, ZINC ION 著者 Yagi, S, Tagami, S. 登録日 2020-11-11 公開日 2021-09-29 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.602 Å) 主引用文献 Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc., 143, 2021
3TIW	Crystal structure of p97N in complex with the C-terminus of gp78 分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase AMFR, Transitional endoplasmic reticulum ATPase 著者 Haenzelmann, P, Schindelin, H. 登録日 2011-08-22 公開日 2011-09-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.802 Å) 主引用文献 The Structural and Functional Basis of the p97/Valosin-containing Protein (VCP)-interacting Motif (VIM): MUTUALLY EXCLUSIVE BINDING OF COFACTORS TO THE N-TERMINAL DOMAIN OF p97. J.Biol.Chem., 286, 2011
4RV0	Crystal structure of TN complex 分子名称: Nuclear protein localization protein 4 homolog, SULFATE ION, Transitional endoplasmic reticulum ATPase TER94 著者 Hao, Q, Jiao, S, Shi, Z.B, Zhou, Z.C. 登録日 2014-11-23 公開日 2015-11-25 実験手法 X-RAY DIFFRACTION (1.998 Å) 主引用文献 Crystal structure of TN complex To be Published
2PJH	Strctural Model of the p97 N domain- npl4 UBD complex 分子名称: Nuclear protein localization protein 4 homolog, Transitional endoplasmic reticulum ATPase 著者 Isaacson, R, Pye, V.E, Simpson, S, Meyer, H.H, Zhang, X, Freemont, P. 登録日 2007-04-16 公開日 2007-05-08 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Detailed structural insights into the p97-Npl4-Ufd1 interface. J.Biol.Chem., 282, 2007
1QCS	N-TERMINAL DOMAIN OF N-ETHYLMALEIMIDE SENSITIVE FACTOR (NSF) 分子名称: N-ETHYLMALEIMIDE SENSITIVE FACTOR (NSF-N), SULFATE ION 著者 Yu, R.C, Jahn, R, Brunger, A.T. 登録日 1999-05-14 公開日 1999-05-18 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 NSF N-terminal domain crystal structure: models of NSF function. Mol.Cell, 4, 1999
1QDN	AMINO TERMINAL DOMAIN OF THE N-ETHYLMALEIMIDE SENSITIVE FUSION PROTEIN (NSF) 分子名称: BETA-MERCAPTOETHANOL, PROTEIN (N-ETHYLMALEIMIDE SENSITIVE FUSION PROTEIN (NSF)), SULFATE ION 著者 May, A.P, Misura, K.M.S, Whiteheart, S.W, Weis, W.I. 登録日 1999-05-21 公開日 1999-06-21 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the amino-terminal domain of N-ethylmaleimide-sensitive fusion protein. Nat.Cell Biol., 1, 1999
1CZ5	NMR STRUCTURE OF VAT-N: THE N-TERMINAL DOMAIN OF VAT (VCP-LIKE ATPASE OF THERMOPLASMA) 分子名称: VCP-LIKE ATPASE 著者 Coles, M, Diercks, T, Liermann, J, Groeger, A, Rockel, B, Baumeister, W, Koretke, K, Lupas, A, Peters, J, Kessler, H. 登録日 1999-09-01 公開日 1999-10-12 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 The solution structure of VAT-N reveals a 'missing link' in the evolution of complex enzymes from a simple betaalphabetabeta element. Curr.Biol., 9, 1999
1CZ4	NMR STRUCTURE OF VAT-N: THE N-TERMINAL DOMAIN OF VAT (VCP-LIKE ATPASE OF THERMOPLASMA) 分子名称: VCP-LIKE ATPASE 著者 Coles, M, Diercks, T, Liermann, J, Groeger, A, Rockel, B, Baumeister, W, Koretke, K, Lupas, A, Peters, J, Kessler, H. 登録日 1999-09-01 公開日 1999-10-12 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 The solution structure of VAT-N reveals a 'missing link' in the evolution of complex enzymes from a simple betaalphabetabeta element. Curr.Biol., 9, 1999
3QQ7	Crystal Structure of the p97 N-terminal domain 分子名称: CHLORIDE ION, COBALT (II) ION, GLYCEROL, ... 著者 Haenzelmann, P, Schindelin, H. 登録日 2011-02-15 公開日 2011-06-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Hierarchical Binding of Cofactors to the AAA ATPase p97. Structure, 19, 2011
4KDL	Crystal structure of p97/VCP N in complex with OTU1 UBXL 分子名称: Transitional endoplasmic reticulum ATPase, Ubiquitin thioesterase OTU1 著者 Kim, S.J, Kim, E.E. 登録日 2013-04-25 公開日 2014-03-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Structural Basis for Ovarian Tumor Domain-containing Protein 1 (OTU1) Binding to p97/Valosin-containing Protein (VCP). J.Biol.Chem., 289, 2014
5GLF	Structural insights into the interaction of p97 N-terminal domain and SHP motif in Derlin-1 rhomboid pseudoprotease 分子名称: Derlin-1, Transitional endoplasmic reticulum ATPase 著者 Lim, J.J, Lee, Y, Yoon, S.Y, Ly, T.T, Kang, J.Y, Youn, H.-S, An, J.Y, Lee, J.-G, Park, K.R, Kim, T.G, Yang, J.K, Jun, Y, Eom, S.H. 登録日 2016-07-11 公開日 2016-11-09 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural insights into the interaction of human p97 N-terminal domain and SHP motif in Derlin-1 rhomboid pseudoprotease. FEBS Lett., 590, 2016
4KDI	Crystal structure of p97/VCP N in complex with OTU1 UBXL 分子名称: Transitional endoplasmic reticulum ATPase, Ubiquitin thioesterase OTU1 著者 Kim, S.J, Kim, E.E. 登録日 2013-04-25 公開日 2014-03-19 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Structural Basis for Ovarian Tumor Domain-containing Protein 1 (OTU1) Binding to p97/Valosin-containing Protein (VCP). J.Biol.Chem., 289, 2014
5B6C	Structural Details of Ufd1 binding to p97 分子名称: Peptide from Ubiquitin fusion degradation protein 1 homolog, Transitional endoplasmic reticulum ATPase 著者 Le, L.T.M, Yang, J.K. 登録日 2016-05-26 公開日 2017-01-04 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural Details of Ufd1 Binding to p97 and Their Functional Implications in ER-Associated Degradation PLoS ONE, 11, 2016
5EPP	Structural Insights into the Interaction of p97 N-terminus Domain and VBM Motif in Rhomboid Protease, RHBDL4 分子名称: Rhomboid-related protein 4, Transitional endoplasmic reticulum ATPase 著者 Lim, J.J, Lee, Y, Ly, T.T, Kang, J.Y, Lee, J.-G, An, J.Y, Youn, H.-S, Park, K.R, Kim, T.G, Yang, J.K, Jun, Y, Eom, S.H. 登録日 2015-11-12 公開日 2016-09-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Structural insights into the interaction of p97 N-terminus domain and VBM in rhomboid protease, RHBDL4. Biochem.J., 473, 2016
5X4L	Crystal structure of the UBX domain of human UBXD7 in complex with p97 N domain 分子名称: Transitional endoplasmic reticulum ATPase, UBX domain-containing protein 7 著者 Jiang, T, Li, Z, Wang, Y, Xu, M. 登録日 2017-02-13 公開日 2017-03-22 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.402 Å) 主引用文献 Crystal structures of the UBX domain of human UBXD7 and its complex with p97 ATPase Biochem. Biophys. Res. Commun., 486, 2017
7OAT	Structural basis for targeted p97 remodelling by ASPL as prerequisite for p97 trimethylation by METTL21D 分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Petrovic, S, Heinemann, U, Roske, Y. 登録日 2021-04-20 公開日 2022-08-03 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.995 Å) 主引用文献 Structural remodeling of AAA+ ATPase p97 by adaptor protein ASPL facilitates posttranslational methylation by METTL21D. Proc.Natl.Acad.Sci.USA, 120, 2023
8HRZ	Crystal structure of the p97-N/D1 hexamer in complex with six p47-UBX domains 分子名称: ADENOSINE-5'-DIPHOSPHATE, NSFL1 cofactor p47, Transitional endoplasmic reticulum ATPase 著者 Nguyen, T.Q, Kang, W. 登録日 2022-12-16 公開日 2023-12-20 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structure of the p97-N/D1 hexmaer in complex with six p47-UBX domains J. Korean Chem. Soc., 68, 2024
6CHS	Cdc48-Npl4 complex in the presence of ATP-gamma-S 分子名称: MAGNESIUM ION, Npl4, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Kim, K.H, Bodnar, N.O, Walz, T, Rapoport, T.A. 登録日 2018-02-22 公開日 2018-07-04 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structure of the Cdc48 ATPase with its ubiquitin-binding cofactor Ufd1-Npl4. Nat. Struct. Mol. Biol., 25, 2018
8B5R	p97-p37-SPI substrate complex 分子名称: I3 sequence being threaded through the p97 channel, Protein phosphatase 1 regulatory subunit 7, Serine/threonine-protein phosphatase PP1-gamma catalytic subunit, ... 著者 van den Boom, J, Marini, G, Meyer, H, Saibil, H. 登録日 2022-09-24 公開日 2023-06-07 最終更新日 2023-07-26 実験手法 ELECTRON MICROSCOPY (6.1 Å) 主引用文献 Structural basis of ubiquitin-independent PP1 complex disassembly by p97. Embo J., 42, 2023
1R7R	The crystal structure of murine p97/VCP at 3.6A 分子名称: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase 著者 Huyton, T, Pye, V.E, Briggs, L.C, Flynn, T.C, Beuron, F, Kondo, H, Ma, J, Zhang, X, Freemont, P.S. 登録日 2003-10-22 公開日 2003-12-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 The crystal structure of murine p97/VCP at 3.6A J.Struct.Biol., 144, 2003
5KIW	p97 ND1-L198W in complex with VIMP 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Selenoprotein S, ... 著者 Tang, W.K, Xia, D. 登録日 2016-06-17 公開日 2018-03-07 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.41 Å) 主引用文献 Structural basis for nucleotide-modulated p97 association with the ER membrane. Cell Discov, 3, 2017
5KIY	p97 ND1-A232E in complex with VIMP 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Selenoprotein S, ... 著者 Tang, W.K, Xia, D. 登録日 2016-06-17 公開日 2017-12-20 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Structural basis for nucleotide-modulated p97 association with the ER membrane. Cell Discov, 3, 2017
6OAB	Cdc48-Npl4 complex processing poly-ubiquitinated substrate in the presence of ADP-BeFx, state 2 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Cell division control protein 48, ... 著者 Twomey, E.C, Ji, Z, Wales, T.E, Bodnar, N.O, Engen, J.R, Rapoport, T.A. 登録日 2019-03-15 公開日 2019-07-03 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Substrate processing by the Cdc48 ATPase complex is initiated by ubiquitin unfolding. Science, 365, 2019

 

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