Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8PGB
DownloadVisualize
BU of 8pgb by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2850
分子名称: 3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-7-[(1~{S})-1-(5-methyl-1,2,4-oxadiazol-3-yl)ethyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-18
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 2850
To Be Published
8PT1
DownloadVisualize
BU of 8pt1 by Molmil
ERK2 covelently bound to RU76 cyclohexenone based inhibitor
分子名称: Mitogen-activated protein kinase 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ~{O}1-methyl ~{O}3-(phenylmethyl) (1~{S},3~{R})-1-methyl-4-oxidanylidene-cyclohexane-1,3-dicarboxylate
著者Sok, P, Poti, A, Remenyi, A, Gogl, G.
登録日2023-07-13
公開日2024-07-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Targeting a key protein-protein interaction surface on mitogen-activated protein kinases by a Michael acceptor-based cyclic warhead scaffold
To Be Published
1BPW
DownloadVisualize
BU of 1bpw by Molmil
BETAINE ALDEHYDE DEHYDROGENASE FROM COD LIVER
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROTEIN (ALDEHYDE DEHYDROGENASE)
著者Johansson, K, El Ahmad, M, Ramaswamy, S, Hjelmqvist, L, Jornvall, H, Eklund, H.
登録日1998-08-12
公開日1998-08-19
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of betaine aldehyde dehydrogenase at 2.1 A resolution.
Protein Sci., 7, 1998
8PGQ
DownloadVisualize
BU of 8pgq by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 3225
分子名称: 7-[(1~{S})-1-[2-(aminomethyl)-6-oxidanylidene-5-oxa-7-azaspiro[3.4]octan-7-yl]ethyl]-3-[3-cyano-4-(methylsulfonylamino)phenyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-18
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 3225
To Be Published
8PRY
DownloadVisualize
BU of 8pry by Molmil
Crystal structure of Trypanosoma cruzi glycerol kinase
分子名称: GLYCEROL, glycerol kinase
著者Lipinski, O, Sonani, R.R, Dubin, G.
登録日2023-07-12
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal structure of Trypanosoma cruzi glycerol kinase in complex with glycerol
To Be Published
8PU4
DownloadVisualize
BU of 8pu4 by Molmil
FaRel2 bound to the ATP analogue, APCPP
分子名称: MAGNESIUM ION, RelA/SpoT domain-containing protein, [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-[[oxidanyl(phosphonooxy)phosphoryl]methyl]phosphinic acid
著者Garcia-Pino, A, Talavera Perez, A, Dominguez Molina, L.
登録日2023-07-16
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献FaRel2 bound to the ATP analogue, APCPP
To Be Published
1R7U
DownloadVisualize
BU of 1r7u by Molmil
Glycosyltransferase B in complex with 3-deoxy-acceptor analog inhibitor
分子名称: Glycoprotein-fucosylgalactoside alpha-galactosyltransferase, MERCURY (II) ION, alpha-L-fucopyranose-(1-2)-hexyl 3-deoxy-beta-D-galactopyranoside
著者Nguyen, H.P, Seto, N.O.L, Cai, Y, Leinala, E.K, Borisova, S.N, Palcic, M.M, Evans, S.V.
登録日2003-10-22
公開日2004-02-10
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献The influence of an intramolecular hydrogen bond in differential recognition of inhibitory acceptor analogs by human ABO(H) blood group A and B glycosyltransferases
J.Biol.Chem., 278, 2003
8PG9
DownloadVisualize
BU of 8pg9 by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2817
分子名称: 7-[(1~{S})-1-[(5~{S})-5-(3-azanylpropyl)-2-oxidanylidene-1,3-oxazolidin-3-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-18
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 2817
To Be Published
8POB
DownloadVisualize
BU of 8pob by Molmil
Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-SO3
分子名称: 6-[[4-[(6-carboxypyridin-2-yl)methyl]-7-(3-sulfopropyl)-1,4,7-triazonan-1-yl]methyl]pyridine-2-carboxylic acid, CHLORIDE ION, Lysozyme C, ...
著者Alsalman, Z, Girard, E.
登録日2023-07-04
公開日2024-07-10
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Influence of Chemical Modifications of the Crystallophore on Protein Nucleating Properties and Supramolecular Interactions Network.
Chemistry, 30, 2024
8PGW
DownloadVisualize
BU of 8pgw by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 3460
分子名称: 7-[(1~{S})-1-[2-(aminomethyl)-6-oxidanylidene-5-oxa-7-azaspiro[3.4]octan-7-yl]ethyl]-3-(5-methoxy-6-oxidanyl-pyridin-3-yl)-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-18
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 3460
To Be Published
1R82
DownloadVisualize
BU of 1r82 by Molmil
Glycosyltransferase B in complex with 3-amino-acceptor analog inhibitor, and uridine diphosphate-galactose
分子名称: GALACTOSE-URIDINE-5'-DIPHOSPHATE, Glycoprotein-fucosylgalactoside alpha-galactosyltransferase, MERCURY (II) ION, ...
著者Nguyen, H.P, Seto, N.O.L, Cai, Y, Leinala, E.K, Borisova, S.N, Palcic, M.M, Evans, S.V.
登録日2003-10-22
公開日2004-02-10
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The influence of an intramolecular hydrogen bond in differential recognition of inhibitory acceptor analogs by human ABO(H) blood group A and B glycosyltransferases
J.Biol.Chem., 278, 2003
1BXK
DownloadVisualize
BU of 1bxk by Molmil
DTDP-GLUCOSE 4,6-DEHYDRATASE FROM E. COLI
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROTEIN (DTDP-GLUCOSE 4,6-DEHYDRATASE)
著者Thoden, J.B, Hegeman, A.D, Frey, P.A, Holden, H.M.
登録日1998-10-05
公開日1998-10-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular Structure of Dtdp-Glucose 4,6-Dehydratase from E. Coli
Protein Sci.
8Q3V
DownloadVisualize
BU of 8q3v by Molmil
Cryo-EM structure of the methanogenic Na+ translocating N5-methyl-H4MPT:CoM methyltransferase complex
分子名称: MAGNESIUM ION, SODIUM ION, Tetrahydromethanopterin S-methyltransferase subunit A 1, ...
著者Aziz, I, Vonck, J, Ermler, U.
登録日2023-08-04
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (2.08 Å)
主引用文献Structural and mechanistic basis of the central energy-converting methyltransferase complex of methanogenesis.
Proc.Natl.Acad.Sci.USA, 121, 2024
8PRI
DownloadVisualize
BU of 8pri by Molmil
The structure of nvBagel9
分子名称: Cell surface protein
著者Vandebroek, L, Voet, A.R.D, Lee, X.Y.
登録日2023-07-12
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of v13Bagel2
To Be Published
8PRL
DownloadVisualize
BU of 8prl by Molmil
The structure of v22Bagel8
分子名称: Cell surface protein
著者Vandebroek, L, Voet, A.R.D, Lee, X.Y.
登録日2023-07-12
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The structure of v13Bagel8
To Be Published
8PTD
DownloadVisualize
BU of 8ptd by Molmil
The surface-exposed lipo-protein of BtuG1 in complex with cyanocobalamin.
分子名称: COBALAMIN, GLYCEROL, HYDROXIDE ION, ...
著者Whittaker, J, Felices Martinez, J.M, Guskov, A, Slotboom, D.J.
登録日2023-07-14
公開日2024-07-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The surface-exposed lipo-protein of BtuG1 in complex with cyanocobalamin.
To Be Published
8PT3
DownloadVisualize
BU of 8pt3 by Molmil
ERK2 covelently bound to RU77 cyclohexenone based inhibitor
分子名称: GLYCEROL, Mitogen-activated protein kinase 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Sok, P, Poti, A, Remenyi, A.
登録日2023-07-13
公開日2024-07-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Targeting a key protein-protein interaction surface on mitogen-activated protein kinases by a Michael acceptor-based cyclic warhead scaffold
To Be Published
8PGG
DownloadVisualize
BU of 8pgg by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2954
分子名称: 3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-7-[(1~{S})-1-(2-oxidanylidene-1~{H}-pyridin-3-yl)ethyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-18
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 2954
To Be Published
8PTS
DownloadVisualize
BU of 8pts by Molmil
human GUK1 in complex with compound AT8001
分子名称: GLYCEROL, Guanylate kinase, [(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-4-fluoranyl-4-methyl-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate
著者Zimberger, C, Canard, B, Ferron, F.
登録日2023-07-14
公開日2024-07-24
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structural and functional basis for metabolic activation of the antiviral drug Bemnifosbuvir
To Be Published
8PG2
DownloadVisualize
BU of 8pg2 by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2728
分子名称: 7-[(1~{S})-1-[5-(3-azanylpropyl)-2-oxidanylidene-1,3-oxazolidin-3-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, DIMETHYL SULFOXIDE, ...
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-18
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 2728
To Be Published
8PGT
DownloadVisualize
BU of 8pgt by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 3393
分子名称: 7-[(1~{S})-1-[2-(aminomethyl)-6-oxidanylidene-5-oxa-7-azaspiro[3.4]octan-7-yl]ethyl]-3-(5-oxidanylpyridin-3-yl)-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-18
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 3393
To Be Published
8PGJ
DownloadVisualize
BU of 8pgj by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2985
分子名称: 7-[(1~{S})-1-[5-[(3-azanylazetidin-1-yl)methyl]-2-oxidanylidene-1,3-oxazolidin-3-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, DIMETHYL SULFOXIDE, ...
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-18
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 2985
To Be Published
8PH0
DownloadVisualize
BU of 8ph0 by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 3637
分子名称: 7-[(1~{S})-1-[2-(aminomethyl)-6-oxidanylidene-5-oxa-7-azaspiro[3.4]octan-7-yl]ethyl]-3-(2-oxidanylidene-1,3-dihydroindol-5-yl)-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-18
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 3637
To Be Published
1BUV
DownloadVisualize
BU of 1buv by Molmil
CRYSTAL STRUCTURE OF THE MT1-MMP-TIMP-2 COMPLEX
分子名称: CALCIUM ION, PROTEIN (MEMBRANE-TYPE MATRIX METALLOPROTEINASE (CDMT1-MMP)), PROTEIN (METALLOPROTEINASE INHIBITOR (TIMP-2)), ...
著者Fernandez-Catalan, C, Bode, W, Huber, R, Turk, D, Calvete, J.J, Lichte, A, Tschesche, H, Maskos, K.
登録日1998-09-07
公開日1999-09-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structure of the complex formed by the membrane type 1-matrix metalloproteinase with the tissue inhibitor of metalloproteinases-2, the soluble progelatinase A receptor.
EMBO J., 17, 1998
8PH3
DownloadVisualize
BU of 8ph3 by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 3747
分子名称: 7-[(1~{S})-1-[2-(aminomethyl)-6-oxidanylidene-5-oxa-7-azaspiro[3.4]octan-7-yl]ethyl]-3-(1-methylpyrazol-4-yl)-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-18
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 3747
To Be Published

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon