Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6UXV
DownloadVisualize
BU of 6uxv by Molmil
SWI/SNF Body Module
分子名称: SWI/SNF chromatin-remodeling complex subunit SNF5, SWI/SNF chromatin-remodeling complex subunit SWI1, SWI/SNF complex subunit SWI3, ...
著者He, Y, Han, Y.
登録日2019-11-08
公開日2020-03-18
最終更新日2025-06-04
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Cryo-EM structure of SWI/SNF complex bound to a nucleosome.
Nature, 579, 2020
5KQE
DownloadVisualize
BU of 5kqe by Molmil
Solution structure of P2a-J2a/b-P2b of medaka telomerase RNA
分子名称: Telomerase RNA P2ab
著者Wang, Y, Feigon, J.
登録日2016-07-06
公開日2016-08-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural conservation in the template/pseudoknot domain of vertebrate telomerase RNA from teleost fish to human.
Proc.Natl.Acad.Sci.USA, 113, 2016
4O0L
DownloadVisualize
BU of 4o0l by Molmil
Crystal structure of NADPH-Dependent 3-Quinuclidinone Reductase from Rhodotorula Rubra
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH-dependent 3-quinuclidinone reductase
著者Takeshita, D, Tanokura, M.
登録日2013-12-13
公開日2014-08-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of stereospecific reduction by quinuclidinone reductase
AMB Express, 4, 2014
5I6A
DownloadVisualize
BU of 5i6a by Molmil
bicyclo[3.3.2]decapeptide
分子名称: ALA-PHE-GLY-LYD-VAL-PHE-PRO-GLN-ALA-GLY, DIMETHYL SULFOXIDE
著者Bartoloni, M, Waltersperger, S, Bumann, M, Stocker, A, Darbre, T, Reymond, J.-L.
登録日2016-02-16
公開日2016-03-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (0.813 Å)
主引用文献Stereoselective synthesis and structure determination of a bicyclo[3.3.2]decapeptide
Arkivoc, 2014, 2014
1LBT
DownloadVisualize
BU of 1lbt by Molmil
LIPASE (E.C.3.1.1.3) (TRIACYLGLYCEROL HYDROLASE)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LIPASE B, METHYLPENTA(OXYETHYL) HEPTADECANOATE
著者Uppenberg, J, Jones, T.A.
登録日1995-07-11
公開日1995-10-15
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystallographic and molecular-modeling studies of lipase B from Candida antarctica reveal a stereospecificity pocket for secondary alcohols.
Biochemistry, 34, 1995
5HLF
DownloadVisualize
BU of 5hlf by Molmil
STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE In COMPLEX WITH A 38-MER HAIRPIN TEMPLATE-PRIMER DNA APTAMER AND AN ALPHA-CARBOXYPHOSPHONATE INHIBITOR
分子名称: DNA (38-MER), GLYCEROL, HIV-1 REVERSE TRANSCRIPTASE P51 SUBUNIT, ...
著者Das, K, Arnold, E.
登録日2016-01-15
公開日2016-02-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Exploring the role of the alpha-carboxyphosphonate moiety in the HIV-RT activity of alpha-carboxy nucleoside phosphonates.
Org.Biomol.Chem., 14, 2016
6MZ3
DownloadVisualize
BU of 6mz3 by Molmil
mCherry pH sensitive mutant - M66T (mCherryTYG)
分子名称: PAmCherry1 protein
著者Haynes, E.P, Tantama, M.
登録日2018-11-03
公開日2019-10-09
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.088 Å)
主引用文献Quantifying Acute Fuel and Respiration Dependent pH Homeostasis in Live Cells Using the mCherryTYG Mutant as a Fluorescence Lifetime Sensor.
Anal.Chem., 91, 2019
6V92
DownloadVisualize
BU of 6v92 by Molmil
RSC-NCP
分子名称: Actin-like protein ARP9, Actin-related protein 7, Chromatin structure-remodeling complex protein RSC14, ...
著者Patel, A.B, Moore, C.M, Greber, B.J, Nogales, E.
登録日2019-12-13
公開日2020-01-15
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Architecture of the chromatin remodeler RSC and insights into its nucleosome engagement.
Elife, 8, 2019
1LBS
DownloadVisualize
BU of 1lbs by Molmil
LIPASE (E.C.3.1.1.3) (TRIACYLGLYCEROL HYDROLASE)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LIPASE B, N-HEXYLPHOSPHONATE ETHYL ESTER
著者Uppenberg, J, Jones, T.A.
登録日1995-07-11
公開日1995-10-15
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystallographic and molecular-modeling studies of lipase B from Candida antarctica reveal a stereospecificity pocket for secondary alcohols.
Biochemistry, 34, 1995
1Y1P
DownloadVisualize
BU of 1y1p by Molmil
X-ray structure of aldehyde reductase with NADPH
分子名称: ACETATE ION, ADENOSINE MONOPHOSPHATE, Aldehyde reductase II, ...
著者Kamitori, S, Kita, K.
登録日2004-11-19
公開日2005-09-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-ray Structures of NADPH-dependent Carbonyl Reductase from Sporobolomyces salmonicolor Provide Insights into Stereoselective Reductions of Carbonyl Compounds
J.Mol.Biol., 352, 2005
6OTZ
DownloadVisualize
BU of 6otz by Molmil
Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and (+)FTC-TP
分子名称: DNA Primer 20-mer, DNA template 27-mer, GLYCEROL, ...
著者Bertoletti, N, Anderson, K.S.
登録日2019-05-03
公開日2019-07-24
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.857 Å)
主引用文献Structural insights into the recognition of nucleoside reverse transcriptase inhibitors by HIV-1 reverse transcriptase: First crystal structures with reverse transcriptase and the active triphosphate forms of lamivudine and emtricitabine.
Protein Sci., 28, 2019
3D8Y
DownloadVisualize
BU of 3d8y by Molmil
RNase A- 5'-Deoxy-5'-N-piperidinothymidine complex
分子名称: 5'-deoxy-5'-piperidin-1-ylthymidine, CITRATE ANION, Ribonuclease pancreatic
著者Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G.
登録日2008-05-26
公開日2009-02-10
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Morpholino, piperidino, and pyrrolidino derivatives of pyrimidine nucleosides as inhibitors of ribonuclease A: synthesis, biochemical, and crystallographic evaluation
J.Med.Chem., 52, 2009
6P1I
DownloadVisualize
BU of 6p1i by Molmil
Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and dCTP
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA Primer 20-mer, DNA template 27-mer, ...
著者Bertoletti, N, Anderson, K.S.
登録日2019-05-19
公開日2019-07-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Structural insights into the recognition of nucleoside reverse transcriptase inhibitors by HIV-1 reverse transcriptase: First crystal structures with reverse transcriptase and the active triphosphate forms of lamivudine and emtricitabine.
Protein Sci., 28, 2019
5YAO
DownloadVisualize
BU of 5yao by Molmil
The complex structure of SZ529 and expoxid
分子名称: (1R,5S)-6-oxabicyclo[3.1.0]hexane, Limonene-1,2-epoxide hydrolase, SODIUM ION
著者Lian, W, Sun, Z.T, Zhou, J.H, Reetz, M.T.
登録日2017-09-01
公開日2018-06-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.611 Å)
主引用文献Structural and Computational Insight into the Catalytic Mechanism of Limonene Epoxide Hydrolase Mutants in Stereoselective Transformations
J. Am. Chem. Soc., 140, 2018
3D8Z
DownloadVisualize
BU of 3d8z by Molmil
RNase A- 5'-Deoxy-5'-N-pyrrolidinothymidine complex
分子名称: 1-(2,5-dideoxy-5-pyrrolidin-1-yl-beta-L-erythro-pentofuranosyl)-5-methylpyrimidine-2,4(1H,3H)-dione, CITRATE ANION, Ribonuclease pancreatic
著者Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G.
登録日2008-05-26
公開日2009-02-10
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Morpholino, piperidino, and pyrrolidino derivatives of pyrimidine nucleosides as inhibitors of ribonuclease A: synthesis, biochemical, and crystallographic evaluation
J.Med.Chem., 52, 2009
6P1X
DownloadVisualize
BU of 6p1x by Molmil
Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and L-ddCTP
分子名称: DNA Primer 20-mer, DNA template 27-mer, MAGNESIUM ION, ...
著者Bertoletti, N, Anderson, K.S.
登録日2019-05-20
公開日2019-07-24
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.553 Å)
主引用文献Structural insights into the recognition of nucleoside reverse transcriptase inhibitors by HIV-1 reverse transcriptase: First crystal structures with reverse transcriptase and the active triphosphate forms of lamivudine and emtricitabine.
Protein Sci., 28, 2019
4QM7
DownloadVisualize
BU of 4qm7 by Molmil
Structure of bacterial polynucleotide kinase bound to GTP and pDNA
分子名称: DNA, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Das, U, Wang, L.K, Smith, P, Shuman, S.
登録日2014-06-15
公開日2014-10-08
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of bacterial polynucleotide kinase in a michaelis complex with nucleoside triphosphate (NTP)-Mg2+ and 5'-OH RNA and a mixed substrate-product complex with NTP-Mg2+ and a 5'-phosphorylated oligonucleotide.
J.Bacteriol., 196, 2014
3T70
DownloadVisualize
BU of 3t70 by Molmil
5'-Diphenyl Nucleoside Inhibitors of Plasmodium falciparum dUTPase
分子名称: 2',5'-dideoxy-5'-[(diphenylmethyl)(methyl)amino]uridine, Deoxyuridine 5'-triphosphate nucleotidohydrolase, putative, ...
著者Hampton, S.E, Baragana, B, Schipani, A, Bosch-Navarrete, C, Musso-Buendia, A, Recio, E, Kaiser, M, Whittingham, J.L, Roberts, S.M, Shevtsov, M, Brannigan, J.A, Kahnberg, P, Brun, R, Wilson, K.S, Gonzalez-Pacanowska, D, Johansson, N.G, Gilbert, I.H.
登録日2011-07-29
公開日2012-08-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Design, synthesis, and evaluation of 5'-diphenyl nucleoside analogues as inhibitors of the Plasmodium falciparum dUTPase.
Chemmedchem, 6, 2011
7LO1
DownloadVisualize
BU of 7lo1 by Molmil
FAD-dependent monooxygenase AfoD from A. nidulans
分子名称: FAD-dependent monooxygenase afoD, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
著者Rodriguez Benitez, A, Smith, J.L, Narayan, A.R.H.
登録日2021-02-08
公開日2022-04-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Deciphering the evolution of flavin-dependent monooxygenase stereoselectivity using ancestral sequence reconstruction.
Proc.Natl.Acad.Sci.USA, 120, 2023
4QM6
DownloadVisualize
BU of 4qm6 by Molmil
Structure of bacterial polynucleotide kinase bound to GTP and RNA
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Metallophosphoesterase, ...
著者Das, U, Wang, L.K, Smith, P, Shuman, S.
登録日2014-06-15
公開日2014-10-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structures of bacterial polynucleotide kinase in a michaelis complex with nucleoside triphosphate (NTP)-Mg2+ and 5'-OH RNA and a mixed substrate-product complex with NTP-Mg2+ and a 5'-phosphorylated oligonucleotide.
J.Bacteriol., 196, 2014
7Q4P
DownloadVisualize
BU of 7q4p by Molmil
U2 snRNP after ATP-dependent remodelling
分子名称: PHD finger-like domain-containing protein 5A, Splicing factor 3A subunit 2, Splicing factor 3A subunit 3, ...
著者Tholen, J, Galej, W.P.
登録日2021-11-01
公開日2022-03-30
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.15 Å)
主引用文献Structural basis of branch site recognition by the human spliceosome.
Science, 375, 2022
7Q4O
DownloadVisualize
BU of 7q4o by Molmil
Substrate-bound A-like U2 snRNP
分子名称: BPS oligo, PHD finger-like domain-containing protein 5A, Splicing factor 3A subunit 2, ...
著者Tholen, J, Galej, W.P.
登録日2021-11-01
公開日2022-03-30
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Structural basis of branch site recognition by the human spliceosome.
Science, 375, 2022
7Q3L
DownloadVisualize
BU of 7q3l by Molmil
Human 17S U2 snRNP 5' domain
分子名称: HIV Tat-specific factor 1, PHD finger-like domain-containing protein 5A, Probable ATP-dependent RNA helicase DDX46, ...
著者Tholen, J, Galej, W.P.
登録日2021-10-28
公開日2022-03-30
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Structural basis of branch site recognition by the human spliceosome.
Science, 375, 2022
7OC6
DownloadVisualize
BU of 7oc6 by Molmil
Selenomethionine derivative of alpha-humulene synthase AsR6 from Sarocladium schorii
分子名称: Alpha-humulene synthase asR6, GLYCEROL, SULFATE ION, ...
著者Schotte, C, Lukat, P, Deuschmann, A, Blankenfeldt, W, Cox, R.J.
登録日2021-04-26
公開日2021-07-07
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Understanding and Engineering the Stereoselectivity of Humulene Synthase.
Angew.Chem.Int.Ed.Engl., 60, 2021
7OC5
DownloadVisualize
BU of 7oc5 by Molmil
Alpha-humulene synthase AsR6 from Sarocladium schorii
分子名称: Alpha-humulene synthase AsR6, MAGNESIUM ION, ZINC ION
著者Schotte, C, Lukat, P, Deuschmann, A, Blankenfeldt, W, Cox, R.J.
登録日2021-04-26
公開日2021-07-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Understanding and Engineering the Stereoselectivity of Humulene Synthase.
Angew.Chem.Int.Ed.Engl., 60, 2021

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon