PDB: 98041 件ウェブページステータス検索Chemie searchBIRD

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2DQU	Crystal form II: high resolution crystal structure of the complex of the hydrolytic antibody Fab 6D9 and a transition-state analog 分子名称: IMMUNOGLOBULIN 6D9, [1-(3-DIMETHYLAMINO-PROPYL)-3-ETHYL-UREIDO]-[4-(2,2,2-TRIFLUORO-ACETYLAMINO)-BENZYL]PHOSPHINIC ACID-2-(2,2-DIHYDRO-ACETYLAMINO)-3-HYDROXY-1-(4-NITROPHENYL)-PROPYL ESTER 著者 Kristensen, O, Vassylyev, D.G, Tanaka, F, Ito, N, Morikawa, K, Fujii, I. 登録日 2006-05-30 公開日 2006-06-20 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Thermodynamic and structural basis for transition-state stabilization in antibody-catalyzed hydrolysis J.Mol.Biol., 369, 2007
2DRR	Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263N mutant 分子名称: GLYCEROL, NICKEL (II) ION, Xylanase Y 著者 Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M. 登録日 2006-06-12 公開日 2006-06-27 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural explanation for the acquisition of glycosynthase activity J.Biochem., 2009
1A8I	SPIROHYDANTOIN INHIBITOR OF GLYCOGEN PHOSPHORYLASE 分子名称: BETA-D-GLUCOPYRANOSE SPIROHYDANTOIN, GLYCOGEN PHOSPHORYLASE B 著者 Gregoriou, M, Noble, M.E.M, Watson, K.A, Garman, E.F, Krulle, T.M, De La Fuente, C, Fleet, G.W.J, Oikonomakos, N.G, Johnson, L.N. 登録日 1998-03-25 公開日 1998-07-01 最終更新日 2023-08-02 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 The structure of a glycogen phosphorylase glucopyranose spirohydantoin complex at 1.8 A resolution and 100 K: the role of the water structure and its contribution to binding. Protein Sci., 7, 1998
1F0S	Crystal Structure of Human Coagulation Factor XA Complexed with RPR208707 分子名称: CALCIUM ION, COAGULATION FACTOR XA, THIENO[3,2-B]PYRIDINE-2-SULFONIC ACID [2-OXO-1-(1H-PYRROLO[2,3-C]PYRIDIN-2-YLMETHYL)-PYRROLIDIN-3-YL]-AMIDE 著者 Maignan, S, Guilloteau, J.P, Pouzieux, S, Choi-Sledeski, Y.M, Becker, M.R, Klein, S.I, Ewing, W.R, Pauls, H.W, Spada, A.P, Mikol, V. 登録日 2000-05-17 公開日 2000-09-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structures of human factor Xa complexed with potent inhibitors. J.Med.Chem., 43, 2000
2IUU	P. aeruginosa FtsK motor domain, hexamer 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA TRANSLOCASE FTSK 著者 Massey, T.H, Mercogliano, C.P, Yates, J, Sherratt, D.J, Lowe, J. 登録日 2006-06-07 公開日 2006-08-29 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Double-Stranded DNA Translocation: Structure and Mechanism of Hexameric Ftsk Mol.Cell, 23, 2006
1X8Q	0.85 A Crystal Structure Of Nitrophorin 4 From Rhodnius Prolixus in Complex with Water at pH 5.6 分子名称: Nitrophorin 4, PROTOPORPHYRIN IX CONTAINING FE 著者 Kondrashov, D.A, Roberts, S.A, Weichsel, A, Montfort, W.R. 登録日 2004-08-18 公開日 2004-10-05 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Protein functional cycle viewed at atomic resolution: conformational change and mobility in nitrophorin 4 as a function of pH and NO binding Biochemistry, 43, 2004
2MQ8	Solution NMR Structure of De novo designed protein LFR1 1 with ferredoxin fold, Northeast Structural Genomics Consortium (NESG) Target OR414 分子名称: De novo designed protein LFR1 著者 Liu, G, Lin, Y, Koga, N, Koga, R, Xiao, R, Janjua, H, Pederson, K, Acton, T.B, Kornhaber, G, Everett, J.K, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2014-06-12 公開日 2014-08-20 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Control over overall shape and size in de novo designed proteins. Proc.Natl.Acad.Sci.USA, 112, 2015
2DRS	Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263S mutant 分子名称: GLYCEROL, NICKEL (II) ION, Xylanase Y 著者 Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M. 登録日 2006-06-12 公開日 2006-06-27 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural explanation for the acquisition of glycosynthase activity J.Biochem., 2009
1AU6	SOLUTION STRUCTURE OF DNA D(CATGCATG) INTERSTRAND-CROSSLINKED BY BISPLATIN COMPOUND (1,1/T,T), NMR, MINIMIZED AVERAGE STRUCTURE 分子名称: BIS(TRANS-PLATINUM ETHYLENEDIAMINE DIAMINE CHLORO)COMPLEX, DNA (5'-D(*CP*AP*TP*GP*CP*AP*TP*G)-3') 著者 Yang, D, Van Boom, S.S.G.E, Reedijk, J, Van Boom, J.H, Farrell, N, Wang, A.H.-J. 登録日 1997-09-11 公開日 1998-02-25 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 A novel DNA structure induced by the anticancer bisplatinum compound crosslinked to a GpC site in DNA. Nat.Struct.Biol., 2, 1995
1Z2X	Crystal structure of mouse Vps29 分子名称: Vacuolar protein sorting 29 著者 Collins, B.M, Skinner, C.F, Watson, P.J, Seaman, M.N.J, Owen, D.J. 登録日 2005-03-10 公開日 2005-06-21 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer assembly NAT.STRUCT.MOL.BIOL., 12, 2005
1Z34	Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with 2-fluoro-2'-deoxyadenosine 分子名称: 5-(6-AMINO-2-FLUORO-PURIN-9-YL)-2-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-OL, purine nucleoside phosphorylase 著者 Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E. 登録日 2005-03-10 公開日 2005-03-29 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex. J.Biol.Chem., 280, 2005
1Z3C	Encephalitozooan cuniculi mRNA Cap (Guanine-N7) Methyltransferasein complexed with AzoAdoMet 分子名称: S-5'-AZAMETHIONINE-5'-DEOXYADENOSINE, mRNA CAPPING ENZYME 著者 Hausmann, S, Zhang, S, Fabrega, C, Schneller, S.W, Lima, C.D, Shuman, S. 登録日 2005-03-11 公開日 2005-03-22 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Encephalitozoon cuniculi mRNA cap (guanine N-7) methyltransferase: methyl acceptor specificity, inhibition BY S-adenosylmethionine analogs, and structure-guided mutational analysis. J.Biol.Chem., 280, 2005
1F6B	CRYSTAL STRUCTURE OF SAR1-GDP COMPLEX 分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SAR1, ... 著者 Huang, M, Wilson, I.A, Balch, W.E. 登録日 2000-06-21 公開日 2002-01-09 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of Sar1-GDP at 1.7 A resolution and the role of the NH2 terminus in ER export. J.Cell Biol., 155, 2001
1F4H	E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) 分子名称: BETA-GALACTOSIDASE, MAGNESIUM ION 著者 Juers, D.H, Jacobson, R.H, Wigley, D, Zhang, X.J, Huber, R.E, Tronrud, D.E, Matthews, B.W. 登録日 2000-06-07 公開日 2001-02-21 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation. Protein Sci., 9, 2000
1F4A	E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) 分子名称: BETA-GALACTOSIDASE, MAGNESIUM ION 著者 Juers, D.H, Jacobson, R.H, Wigley, D, Zhang, X.J, Huber, R.E, Tronrud, D.E, Matthews, B.W. 登録日 2000-06-07 公開日 2001-02-21 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation. Protein Sci., 9, 2000
1F5W	DIMERIC STRUCTURE OF THE COXSACKIE VIRUS AND ADENOVIRUS RECEPTOR D1 DOMAIN 分子名称: COXSACKIE VIRUS AND ADENOVIRUS RECEPTOR, SULFATE ION 著者 van Raaij, M.J, Chouin, E, van der Zandt, H, Bergelson, J.M, Cusack, S. 登録日 2000-06-18 公開日 2000-11-08 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Dimeric structure of the coxsackievirus and adenovirus receptor D1 domain at 1.7 A resolution. Structure Fold.Des., 8, 2000
2DS0	Crystal structure of the earthworm lectin C-terminal domain mutant in complex with 6'-sialyllactose 分子名称: 29-kDa galactose-binding lectin, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, SULFATE ION 著者 Suzuki, R, Fujimoto, Z. 登録日 2006-06-16 公開日 2007-02-06 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Tailoring a novel sialic acid-binding lectin from a ricin-B chain-like galactose-binding protein by natural evolution-mimicry J.Biochem., 141, 2007
1Z33	Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase 分子名称: purine nucleoside phosphorylase 著者 Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E. 登録日 2005-03-10 公開日 2005-03-29 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex. J.Biol.Chem., 280, 2005
1Z39	Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with 2'-deoxyinosine 分子名称: 2'-DEOXYINOSINE, purine nucleoside phosphorylase 著者 Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E. 登録日 2005-03-10 公開日 2005-03-29 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex. J.Biol.Chem., 280, 2005
1FCF	PHOTOSYSTEM II D1 C-TERMINAL PROCESSING PROTEASE 分子名称: PHOTOSYSTEM II D1 PROTEASE, SULFATE ION 著者 Liao, D.I, Qian, J, Chisholm, D.A, Jordan, D.B, Diner, B.A. 登録日 2000-07-18 公開日 2001-01-18 最終更新日 2018-10-10 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structures of the photosystem II D1 C-terminal processing protease. Nat.Struct.Biol., 7, 2000
1KV1	p38 MAP Kinase in Complex with Inhibitor 1 分子名称: 1-(5-TERT-BUTYL-2-METHYL-2H-PYRAZOL-3-YL)-3-(4-CHLORO-PHENYL)-UREA, p38 MAP kinase 著者 Pargellis, C, Tong, L, Churchill, L, Cirillo, P.F, Gilmore, T, Graham, A.G, Grob, P.M, Hickey, E.R, Moss, N, Pav, S, Regan, J. 登録日 2002-01-23 公開日 2002-03-27 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Inhibition of p38 MAP kinase by utilizing a novel allosteric binding site. Nat.Struct.Biol., 9, 2002
1FHR	SOLUTION STRUCTURE OF THE FHA2 DOMAIN OF RAD53 COMPLEXED WITH A PHOSPHOTYROSYL PEPTIDE 分子名称: DNA REPAIR PROTEIN RAD9, PROTEIN KINASE SPK1 著者 Byeon, I.-J.L, Liao, H, Yongkiettrakul, S, Tsai, M.-D. 登録日 2000-08-02 公開日 2000-10-18 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 II. Structure and specificity of the interaction between the FHA2 domain of Rad53 and phosphotyrosyl peptides. J.Mol.Biol., 302, 2000
2DEP	Crystal Structure of xylanase B from Clostridium stercorarium F9 分子名称: Thermostable celloxylanase 著者 Fushinobu, S, Nishimoto, M, Miyanaga, A, Kitaoka, M, Hayashi, K. 登録日 2006-02-16 公開日 2007-01-16 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular anatomy of the alkaliphilic xylanase from Bacillus halodurans C-125 To be Published
2DRO	Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263C mutant 分子名称: GLYCEROL, NICKEL (II) ION, Xylanase Y 著者 Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M. 登録日 2006-06-12 公開日 2006-06-27 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural explanation for the acquisition of glycosynthase activity J.Biochem., 2009
1FC6	PHOTOSYSTEM II D1 C-TERMINAL PROCESSING PROTEASE 分子名称: PHOTOSYSTEM II D1 PROTEASE 著者 Liao, D.I, Qian, J, Chisholm, D.A, Jordan, D.B, Diner, B.A. 登録日 2000-07-18 公開日 2001-01-18 最終更新日 2021-11-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structures of the photosystem II D1 C-terminal processing protease. Nat.Struct.Biol., 7, 2000

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