Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6Y2J
DownloadVisualize
BU of 6y2j by Molmil
Crystal structure of M. tuberculosis KasA in complex with 4,4,4-trifluoro-N-(isoquinolin-6-yl)butane-1-sulfonamide
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 1, 4,4,4-tris(fluoranyl)-~{N}-isoquinolin-6-yl-butane-1-sulfonamide, SODIUM ION, ...
著者Chung, C.
登録日2020-02-16
公開日2020-04-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.886 Å)
主引用文献Exploring the SAR of the beta-Ketoacyl-ACP Synthase Inhibitor GSK3011724A and Optimization around a Genotoxic Metabolite.
Acs Infect Dis., 6, 2020
5YKR
DownloadVisualize
BU of 5ykr by Molmil
Crystal structure of a glutamate-1-semialdehyde-aminomutase from Pseudomonas aeruginosa PAO1
分子名称: Probable aminotransferase
著者Li, S, Zhang, Q, Bartlam, M.
登録日2017-10-16
公開日2018-09-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Crystal structure of a glutamate-1-semialdehyde-aminomutase from Pseudomonas aeruginosa PAO1.
Biochem. Biophys. Res. Commun., 500, 2018
8XJJ
DownloadVisualize
BU of 8xjj by Molmil
Co-crystal structure of SOS-1 and a potent, selective and orally bioavailable SOS1 inhibitor RGT-018
分子名称: 1,2-ETHANEDIOL, 5-[4-[[(1~{R})-1-[3-[bis(fluoranyl)methyl]-2-fluoranyl-phenyl]ethyl]amino]-2-methyl-6-morpholin-4-yl-7-oxidanylidene-pyrido[4,3-d]pyrimidin-8-yl]pyridine-2-carbonitrile, Son of sevenless homolog 1
著者Ren, X.
登録日2023-12-21
公開日2024-08-14
最終更新日2024-12-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Discovery of RGT-018: A Potent, Selective, and Orally Bioavailable SOS1 Inhibitor for KRAS-Driven Cancers.
Mol.Cancer Ther., 23, 2024
5M9M
DownloadVisualize
BU of 5m9m by Molmil
Human angiogenin PD variant Q77P
分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Angiogenin, ...
著者Bradshaw, W.J, Rehman, S, Pham, T.T.K, Thiyagarajan, N, Lee, R.L, Subramanian, V, Acharya, K.R.
登録日2016-11-01
公開日2017-02-22
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural insights into human angiogenin variants implicated in Parkinson's disease and Amyotrophic Lateral Sclerosis.
Sci Rep, 7, 2017
7ZS6
DownloadVisualize
BU of 7zs6 by Molmil
Crystal structure of Apis mellifera RidA
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, Reactive intermediate deaminase A, ...
著者Visentin, C, Rizzi, G, Ricagno, S.
登録日2022-05-06
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Apis mellifera RidA, a novel member of the canonical YigF/YER057c/UK114 imine deiminase superfamily of enzymes pre-empting metabolic damage.
Biochem.Biophys.Res.Commun., 616, 2022
1A2W
DownloadVisualize
BU of 1a2w by Molmil
CRYSTAL STRUCTURE OF A 3D DOMAIN-SWAPPED DIMER OF BOVINE PANCREATIC RIBONUCLEASE A
分子名称: CHLORIDE ION, RIBONUCLEASE A, SULFATE ION
著者Liu, Y, Hart, P.J, Schlunegger, M.P, Eisenberg, D.S.
登録日1998-01-12
公開日1998-04-29
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of a 3D domain-swapped dimer of RNase A at a 2.1-A resolution.
Proc.Natl.Acad.Sci.USA, 95, 1998
3K85
DownloadVisualize
BU of 3k85 by Molmil
Crystal structure of a D-glycero-D-manno-heptose 1-phosphate kinase from Bacteriodes thetaiotaomicron
分子名称: D-glycero-D-manno-heptose 1-phosphate kinase
著者Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-10-13
公開日2009-12-08
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Crystal structure of a D-glycero-D-manno-heptose 1-phosphate kinase from Bacteriodes thetaiotaomicron
To be Published
7MS7
DownloadVisualize
BU of 7ms7 by Molmil
Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with (5-((4-(4-chlorophenyl)piperidin-1-yl)sulfonyl)picolinoyl)glycine
分子名称: 1,2-ETHANEDIOL, ACETATE ION, N-{5-[4-(4-chlorophenyl)piperidine-1-sulfonyl]pyridine-2-carbonyl}glycine, ...
著者Mann, M.K, Zepeda-Velazquez, C.A, Alvarez, H.G, Dong, A, Kiyota, T, Aman, A, Arrowsmith, C.H, Al-Awar, R, Harding, R.J, Schapira, M.
登録日2021-05-10
公開日2021-06-09
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure-Activity Relationship of USP5 Inhibitors.
J.Med.Chem., 64, 2021
6HDJ
DownloadVisualize
BU of 6hdj by Molmil
R49K variant of beta-phosphoglucomutase from Lactococcus lactis complexed aluminium tetrafluoride and beta-G6P to 1.2 A.
分子名称: 1,2-ETHANEDIOL, 6-O-phosphono-beta-D-glucopyranose, Beta-phosphoglucomutase, ...
著者Robertson, A.J, Bisson, C, Waltho, J.P.
登録日2018-08-17
公開日2020-08-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Transition state of phospho-enzyme hydrolysis in beta-phosphoglucomutase.
To Be Published
7MS6
DownloadVisualize
BU of 7ms6 by Molmil
Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with (2-fluoro-4-((4-phenylpiperidin-1-yl)sulfonyl)benzoyl)glycine
分子名称: 1,2-ETHANEDIOL, N-[2-fluoro-4-(4-phenylpiperidine-1-sulfonyl)benzoyl]glycine, SULFATE ION, ...
著者Mann, M.K, Zepeda-Velazquez, C.A, Alvarez, H.G, Dong, A, Kiyota, T, Aman, A, Arrowsmith, C.H, Al-Awar, R, Harding, R.J, Schapira, M.
登録日2021-05-10
公開日2021-06-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure-Activity Relationship of USP5 Inhibitors.
J.Med.Chem., 64, 2021
1A49
DownloadVisualize
BU of 1a49 by Molmil
BIS MG-ATP-K-OXALATE COMPLEX OF PYRUVATE KINASE
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, OXALATE ION, ...
著者Larsen, T.M, Benning, M.M, Rayment, I, Reed, G.H.
登録日1998-02-12
公開日1999-04-20
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the bis(Mg2+)-ATP-oxalate complex of the rabbit muscle pyruvate kinase at 2.1 A resolution: ATP binding over a barrel.
Biochemistry, 37, 1998
8C10
DownloadVisualize
BU of 8c10 by Molmil
Biochemical and structural characterisation of an alkaline family GH5 cellulase from a shipworm symbiont
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GH5 Cellulase, ...
著者Leiros, I, Vaaje-Kolstad, G.
登録日2022-12-19
公開日2023-04-19
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Biochemical and structural characterisation of a family GH5 cellulase from endosymbiont of shipworm P. megotara.
Biotechnol Biofuels Bioprod, 16, 2023
7CSN
DownloadVisualize
BU of 7csn by Molmil
Crystal structure of peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.00 A resolution
分子名称: Peptidyl-tRNA hydrolase
著者Viswanathan, V, Sharma, P, Singh, P.K, Kaur, P, Sharma, S, Singh, T.P.
登録日2020-08-15
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Crystal structure of peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.00 A resolution
To Be Published
9DMF
DownloadVisualize
BU of 9dmf by Molmil
Crystal structure of LJF-0085 Fab, a non-human primate antibody targets HIV-1 envelope protein
分子名称: LJF-0085 Fab heavy chain, LJF-0085 Fab light chain
著者Lin, X, Wilson, I.A.
登録日2024-09-13
公開日2025-07-23
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Vaccination of nonhuman primates elicits a broadly neutralizing antibody lineage targeting a quaternary epitope on the HIV-1 Env trimer.
Immunity, 58, 2025
6HVD
DownloadVisualize
BU of 6hvd by Molmil
Human SLK bound to a maleimide inhibitor
分子名称: 1,2-ETHANEDIOL, 3-(1,3-benzothiazol-2-ylamino)-4-(2-methoxyphenyl)pyrrole-2,5-dione, STE20-like serine/threonine-protein kinase, ...
著者Sorrell, F.J, Berger, B.T, Salah, E, Serafim, R.A.M, Savitsky, P.A, Krojer, T, Bailey, H.J, Pinkas, D, Burgess-Brown, N.A, von Delft, F, Knapp, S, Arrowsmith, C, Bountra, C, Edwards, A.M, Elkins, J.M.
登録日2018-10-10
公開日2018-10-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Human SLK bound to a maleimide inhibitor
To Be Published
7CGP
DownloadVisualize
BU of 7cgp by Molmil
Cryo-EM structure of the human mitochondrial translocase TIM22 complex at 3.7 angstrom.
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Acylglycerol kinase, mitochondrial, ...
著者Qi, L, Wang, Q, Guan, Z, Yan, C, Yin, P.
登録日2020-07-01
公開日2020-10-14
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of the human mitochondrial translocase TIM22 complex.
Cell Res., 31, 2021
7C5D
DownloadVisualize
BU of 7c5d by Molmil
Crystal structure of TRF2 TRFH domain in complex with a MCPH1 peptide
分子名称: GLYCEROL, Microcephalin, Telomeric repeat-binding factor 2
著者Xiong, X, Chen, Y.
登録日2020-05-19
公開日2020-10-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.151 Å)
主引用文献Microcephalin 1/BRIT1-TRF2 interaction promotes telomere replication and repair, linking telomere dysfunction to primary microcephaly.
Nat Commun, 11, 2020
8PFK
DownloadVisualize
BU of 8pfk by Molmil
RNA structure with 1-methylpseudouridine, C2 space group
分子名称: MAGNESIUM ION, RNA (12-mer)
著者Spingler, B, McAuley, K, Nievergelt, P, Thorn, A.
登録日2023-06-16
公開日2024-01-31
最終更新日2025-02-19
実験手法X-RAY DIFFRACTION (1.321 Å)
主引用文献RNA oligomers at atomic resolution containing 1-methylpseudouridine, an essential building block of mRNA vaccines.
Chemmedchem, 19, 2024
6GS0
DownloadVisualize
BU of 6gs0 by Molmil
Native Glucuronoyl Esterase from Opitutus terrae
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, Putative acetyl xylan esterase, ...
著者Lo Leggio, L, Larsbrink, J, Meland Knudsen, R, Mazurkewich, S, Navarro Poulsen, J.C.
登録日2018-06-13
公開日2018-08-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Biochemical and structural features of diverse bacterial glucuronoyl esterases facilitating recalcitrant biomass conversion.
Biotechnol Biofuels, 11, 2018
8PTQ
DownloadVisualize
BU of 8ptq by Molmil
COMPLEX CRYSTAL STRUCTURE OF MUTANT HUMAN MONOGLYCERIDE LIPASE WITH COMPOUND 5l
分子名称: 1,2-ETHANEDIOL, Monoglyceride lipase, methyl 4-[(2~{S},3~{R})-3-(4-fluorophenyl)-1-(1-methanoylpiperidin-4-yl)-4-oxidanylidene-azetidin-2-yl]benzoate
著者Butini, S, Grether, U, Benz, J, Leibrock, L, Maramai, S, Papa, A, Carullo, G, Federico, S, Grillo, A, Di Guglielmo, B, Lamponi, S, Gemma, S, Campiani, G.
登録日2023-07-14
公開日2024-01-31
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Development of Potent and Selective Monoacylglycerol Lipase Inhibitors. SARs, Structural Analysis, and Biological Characterization.
J.Med.Chem., 67, 2024
5KZA
DownloadVisualize
BU of 5kza by Molmil
Crystal structure of the Rous sarcoma virus matrix protein (aa 2-102). Space group I41
分子名称: 1,2-ETHANEDIOL, NITRATE ION, virus matrix protein
著者Kingston, R.L, Chan, J, Vogt, V.M.
登録日2016-07-24
公開日2017-07-26
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Cholesterol Promotes Protein Binding by Affecting Membrane Electrostatics and Solvation Properties.
Biophys. J., 113, 2017
9DGP
DownloadVisualize
BU of 9dgp by Molmil
Motor domain of dynein-1 complex on microtubules
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1, ...
著者Rao, Q, Chai, P, Zhang, K.
登録日2024-09-03
公開日2025-09-10
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of dynein-1 on microtubules
To Be Published
165D
DownloadVisualize
BU of 165d by Molmil
THE STRUCTURE OF A MISPAIRED RNA DOUBLE HELIX AT 1.6 ANGSTROMS RESOLUTION AND IMPLICATIONS FOR THE PREDICTION OF RNA SECONDARY STRUCTURE
分子名称: DNA/RNA (5'-R(*GP*CP*UP*UP*CP*GP*GP*CP*)-D(*(BRU))-3'), RHODIUM HEXAMINE ION
著者Cruse, W, Saludjian, P, Biala, E, Strazewski, P, Prange, T, Kennard, O.
登録日1994-03-21
公開日1994-08-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure of a mispaired RNA double helix at 1.6-A resolution and implications for the prediction of RNA secondary structure.
Proc.Natl.Acad.Sci.USA, 91, 1994
9JTM
DownloadVisualize
BU of 9jtm by Molmil
Human glucose 6 phosphate catalytic subunit 1 (hG6PC1) bound with G6P
分子名称: 6-O-phosphono-alpha-D-glucopyranose, Glucose-6-phosphatase catalytic subunit 1,GSlinker-HRV3C-GFP-twin strep, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine
著者Chen, Q, Zhao, Y.
登録日2024-10-05
公開日2025-08-06
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献The induced-fit and catalytic mechanisms of human G6PC1
Cell Discov, 11, 2025
9JTL
DownloadVisualize
BU of 9jtl by Molmil
Human glucose 6 phosphate catalytic subunit 1 (hG6PC1) in apo state.
分子名称: Glucose-6-phosphatase catalytic subunit 1,GS linker-HRV3C-GFP-twin strep, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine
著者Chen, Q, Zhao, Y, Wang, Y.
登録日2024-10-05
公開日2025-08-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The induced-fit and catalytic mechanisms of human G6PC1
Cell Discov, 11, 2025

243083

件を2025-10-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon