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6R0P
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BU of 6r0p by Molmil
Getah virus macro domain in complex with ADPr in double open conformation
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Non-structural polyprotein, ...
著者Sulzenbacher, G, Ferreira Ramos, A.S, Coutard, B.
登録日2019-03-13
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Snapshots of ADP-ribose bound to Getah virus macro domain reveal an intriguing choreography.
Sci Rep, 10, 2020
6D71
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BU of 6d71 by Molmil
Crystal Structure of the Human Miro1 N-terminal GTPase bound to GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Mitochondrial Rho GTPase 1
著者Smith, K.P, Focia, P.J, Rice, S.E, Freymann, D.M.
登録日2018-04-23
公開日2019-10-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.7180779 Å)
主引用文献Insight into human Miro1/2 domain organization based on the structure of its N-terminal GTPase.
J.Struct.Biol., 212, 2020
7PG8
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BU of 7pg8 by Molmil
NaV_Ae1/Sp1CTD_pore-ANT05 complex
分子名称: ANT05 H12 fab fragment, heavy chain, light chain, ...
著者Lolicato, M, Arrigoni, C.
登録日2021-08-13
公開日2022-06-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Quaternary structure independent folding of voltage-gated ion channel pore domain subunits.
Nat.Struct.Mol.Biol., 29, 2022
6R0F
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BU of 6r0f by Molmil
Getah virus macro domain in complex with ADPr, pose 1
分子名称: Non-structural polyprotein, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Sulzenbacher, G, Ferreira Ramos, A.S, Coutard, B.
登録日2019-03-12
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Snapshots of ADP-ribose bound to Getah virus macro domain reveal an intriguing choreography.
Sci Rep, 10, 2020
6KGM
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BU of 6kgm by Molmil
LSD1-CoREST-S2116 five-membered ring adduct model
分子名称: 3-[3,5-bis(fluoranyl)-2-phenylmethoxy-phenyl]propanal, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Niwa, H, Sato, S, Umehara, T.
登録日2019-07-12
公開日2020-03-25
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Development and Structural Evaluation of N-Alkylated trans-2-Phenylcyclopropylamine-Based LSD1 Inhibitors.
Chemmedchem, 15, 2020
6GIE
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BU of 6gie by Molmil
Crystal structure of the Acinetobacter baumannii outer membrane protein Omp33
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 33-36 kDa outer membrane protein
著者Abellon-Ruiz, J, Zahn, M, Basle, A, van den Berg, B.
登録日2018-05-10
公開日2018-09-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the Acinetobacter baumannii outer membrane protein Omp33.
Acta Crystallogr D Struct Biol, 74, 2018
7K40
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BU of 7k40 by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (3CLpro/Mpro) in Complex with Covalent Inhibitor Boceprevir at 1.35 A Resolution
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE, boceprevir (bound form)
著者Kumaran, D, Andi, B, Kreitler, D.F, Soares, A.S, Shi, W, Jakoncic, J, Fuchs, M.R, Keereetaweep, J, Shanklin, J, McSweeney, S.
登録日2020-09-14
公開日2020-09-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Hepatitis C virus NS3/4A inhibitors and other drug-like compounds as covalent binders of SARS-CoV-2 main protease.
Sci Rep, 12, 2022
6R0L
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BU of 6r0l by Molmil
Histone fold domain of OsGhd8/NF-YC7 in I2
分子名称: GLYCEROL, OsGhd8, OsNF-YC7
著者Chaves-Sanjuan, A, Gobbini, A, Nardini, M.
登録日2019-03-13
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants.
Plant J., 105, 2021
8BIX
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BU of 8bix by Molmil
Cystathionine gamma-lyase N360S mutant from Toxoplasma gondii in complex with cystathionine
分子名称: 2-AMINO-4-MERCAPTO-BUTYRIC ACID, Cystathionine beta-lyase, putative, ...
著者Fernandez-Rodriguez, C, Conter, C, Oyenarte, I, Favretto, F, Quintana, I, Martinez-Chantar, M.L, Astegno, A, Martinez-Cruz, L.A.
登録日2022-11-02
公開日2023-04-12
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structural basis of the inhibition of cystathionine gamma-lyase from Toxoplasma gondii by propargylglycine and cysteine.
Protein Sci., 32, 2023
6GJK
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BU of 6gjk by Molmil
A degradation product of PD 404182 (P2742) bound to Histone Deacetylase-like Amidohydrolase
分子名称: 2-(1,4,5,6-tetrahydropyrimidin-2-yl)benzenethiol, ACETATE ION, D-MALATE, ...
著者Kraemer, A, Meyer-Almes, F.J.
登録日2018-05-16
公開日2019-01-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Covalent inhibition of histone deacetylase 8 by 3,4-dihydro-2H-pyrimido[1,2-c][1,3]benzothiazin-6-imine.
Biochim Biophys Acta Gen Subj, 1863, 2019
5W46
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BU of 5w46 by Molmil
Structure of S65D Phosphomimetic Ubiquitin Refined at 1.2 Angstroms Resolution
分子名称: MAGNESIUM ION, Polyubiquitin-B
著者Kazansky, Y, Singh, R.K, Fushman, D.
登録日2017-06-09
公開日2017-07-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Impact of different ionization states of phosphorylated Serine-65 on ubiquitin structure and interactions.
Sci Rep, 8, 2018
6GIM
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BU of 6gim by Molmil
Structure of the DNA duplex d(AAATTT)2 with [N-(3-chloro-4-((4,5-dihydro-1H-imidazol-2-yl)amino)phenyl)-4-((4,5-dihydro-1H-imidazol-2- yl)amino)benzamide] - (drug JNI18)
分子名称: DNA (5'-D(*AP*AP*AP*TP*TP*T)-3'), MAGNESIUM ION, [4-[(3-chloranyl-4-imidazolidin-2-ylideneazaniumyl-phenyl)carbamoyl]phenyl]-imidazolidin-2-ylidene-azanium
著者Millan, C.R, Dardonvile, C, de Koning, H.P, Saperas, N, Campos, J.L.
登録日2018-05-14
公開日2018-08-08
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Functional and structural analysis of AT-specific minor groove binders that disrupt DNA-protein interactions and cause disintegration of the Trypanosoma brucei kinetoplast.
Nucleic Acids Res., 45, 2017
7PZH
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BU of 7pzh by Molmil
Phocaeicola vulgatus sialic acid esterase at 2.06 Angstrom resolution
分子名称: Lysophospholipase L1, MAGNESIUM ION
著者Scott, H, Armstrong, Z, Davies, G.J.
登録日2021-10-12
公開日2022-05-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献The structure of Phocaeicola vulgatus sialic acid acetylesterase.
Acta Crystallogr D Struct Biol, 78, 2022
5VQ3
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BU of 5vq3 by Molmil
Nitrogenase Cp1 at pH 6.5
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (II) ION, FE(8)-S(7) CLUSTER, ...
著者Morrison, C.N, Spatzal, T, Rees, D.C.
登録日2017-05-07
公開日2017-07-26
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Reversible Protonated Resting State of the Nitrogenase Active Site.
J. Am. Chem. Soc., 139, 2017
6R0M
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BU of 6r0m by Molmil
Histone fold domain of AtNF-YB2/NF-YC3 in P212121
分子名称: NF-YB2, NF-YC3
著者Chaves-Sanjuan, A, Gnesutta, N, Chiara, M, Bernardini, A, Fornara, F, Horner, D, Nardini, M, Mantovani, R.
登録日2019-03-13
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants.
Plant J., 105, 2021
7JZT
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BU of 7jzt by Molmil
Low resolution crystal structure of Zaire Ebola virus VP40 in space group P6422
分子名称: Matrix protein VP40
著者Norris, M.J, Bornholdt, Z.A, Saphire, E.O.
登録日2020-09-02
公開日2020-10-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.77 Å)
主引用文献Ebola and Marburg virus matrix layers are locally ordered assemblies of VP40 dimers.
Elife, 9, 2020
8BJ8
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BU of 8bj8 by Molmil
Desulfovibrio desulfuricans FeFe Hydrogenase C178A mutant in Htrans-like state
分子名称: Binuclear [FeFe], di(thiomethyl)amine, carbon monoxide, ...
著者Bikbaev, K, Span, I.
登録日2022-11-03
公開日2023-04-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Binding of exogenous cyanide reveals new active-site states in [FeFe] hydrogenases.
Chem Sci, 14, 2023
6R0T
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BU of 6r0t by Molmil
Getah virus macro domain in complex with ADPr in open conformation
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Non-structural polyprotein, ...
著者Ferreira Ramos, A.S, Sulzenbacher, G, Coutard, B.
登録日2019-03-13
公開日2020-04-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Snapshots of ADP-ribose bound to Getah virus macro domain reveal an intriguing choreography.
Sci Rep, 10, 2020
8THM
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BU of 8thm by Molmil
Beta carbonic anhydrase from the carboxysome of Cyanobium PCC 7001
分子名称: 1,2-ETHANEDIOL, BICARBONATE ION, CARBON DIOXIDE, ...
著者Pulsford, S.B, Jackson, C.J.
登録日2023-07-17
公開日2023-08-09
最終更新日2024-08-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Cyanobacterial alpha-carboxysome carbonic anhydrase is allosterically regulated by the Rubisco substrate RuBP.
Sci Adv, 10, 2024
7K4P
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BU of 7k4p by Molmil
Crystal structure of Kemp Eliminase HG3
分子名称: Endo-1,4-beta-xylanase
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
7PZG
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BU of 7pzg by Molmil
Phocaeicola vulgatus sialic acid esterase at 1.44 Angstrom resolution
分子名称: 1,2-ETHANEDIOL, Lysophospholipase L1, MAGNESIUM ION, ...
著者Scott, H, Armstrong, Z, Davies, G.J.
登録日2021-10-12
公開日2022-05-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献The structure of Phocaeicola vulgatus sialic acid acetylesterase.
Acta Crystallogr D Struct Biol, 78, 2022
6Z2H
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BU of 6z2h by Molmil
Citryl-CoA lyase module of human ATP citrate lyase in complex with (3S)-citryl-CoA.
分子名称: (3S)-citryl-Coenzyme A, ACETYL COENZYME *A, ATP-citrate synthase, ...
著者Verschueren, K.H.G, Verstraete, K.
登録日2020-05-15
公開日2021-05-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Acetyl-CoA is produced by the citrate synthase homology module of ATP-citrate lyase.
Nat.Struct.Mol.Biol., 28, 2021
8T8Q
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BU of 8t8q by Molmil
Identification of GDC-1971 (RLY-1971), a SHP2 inhibitor designed for the treatment of solid tumors
分子名称: 1-[(3P)-3-(3-chloro-2-fluorophenyl)-1H-pyrazolo[3,4-b]pyrazin-6-yl]-4-methylpiperidin-4-amine, Tyrosine-protein phosphatase non-receptor type 11
著者Tang, Y, Nguyen, V, Wilbur, J.D.
登録日2023-06-23
公開日2023-10-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Identification of GDC-1971 (RLY-1971), a SHP2 Inhibitor Designed for the Treatment of Solid Tumors.
J.Med.Chem., 66, 2023
6R0H
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Glycogen Phosphorylase b in complex with 3
分子名称: 3-(4-fluorophenyl)-~{N}-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]benzamide, Glycogen phosphorylase, muscle form, ...
著者Tsagkarakou, S.A, Koulas, M.S, Kyriakis, E, Stravodimos, G.A, Skamnaki, V.T, Leonidas, D.D.
登録日2019-03-13
公開日2019-04-10
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献High Consistency of Structure-Based Design and X-Ray Crystallography: Design, Synthesis, Kinetic Evaluation and Crystallographic Binding Mode Determination of Biphenyl-N-acyl-beta-d-Glucopyranosylamines as Glycogen Phosphorylase Inhibitors.
Molecules, 24, 2019
6GJ9
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BU of 6gj9 by Molmil
PURPLE ACID PHYTASE FROM WHEAT ISOFORM B2 - REGENERATION COMPLEX
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Faba-Rodriguez, R, Brearley, C.A, Hemmings, A.M.
登録日2018-05-16
公開日2019-11-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Crystal structure of a cereal purple acid phytase provides insights to phytate degradation in plants
To Be Published

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件を2024-08-28に公開中

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