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3BJK
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Crystal structure of HI0827, a hexameric broad specificity acyl-coenzyme A thioesterase: The Asp44Ala mutant enzyme
分子名称: 1,2-ETHANEDIOL, Acyl-CoA thioester hydrolase HI0827, CITRIC ACID
著者Willis, M.A, Herzberg, O, Structure 2 Function Project (S2F)
登録日2007-12-04
公開日2008-02-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of YciA from Haemophilus influenzae (HI0827), a Hexameric Broad Specificity Acyl-Coenzyme A Thioesterase.
Biochemistry, 47, 2008
3B3B
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Crystal structure of E. coli Aminopeptidase N in complex with tryptophan
分子名称: Aminopeptidase N, GLYCEROL, MALONATE ION, ...
著者Addlagatta, A.
登録日2007-10-19
公開日2008-05-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for the unusual specificity of Escherichia coli aminopeptidase N.
Biochemistry, 47, 2008
3BDG
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Crystal structure of wild-type/T155V mixed dimer of E. coli alkaline phosphatase
分子名称: Alkaline phosphatase, SULFATE ION
著者Grigg, J.C, Murphy, M.E.
登録日2007-11-14
公開日2008-11-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The Active-Site Trimetallic Cluster of Alkaline Phosphatase is Lost Upon Isosteric Mutation at the Mg2+-Coordinating Residue Threonine-155
To be Published
1Y0X
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Thyroxine-Thyroid Hormone Receptor Interactions
分子名称: 3,5,3',5'-TETRAIODO-L-THYRONINE, CACODYLATE ION, Thyroid hormone receptor beta-1
著者Sandler, B, Webb, P, Apriletti, J.W, Huber, B.R, Togashi, M, Cunha Lima, S.T, Juric, S, Nilsson, S, Wagner, R, Fletterick, R.J, Baxter, J.D.
登録日2004-11-16
公開日2004-12-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Thyroxine-thyroid hormone receptor interactions.
J.Biol.Chem., 279, 2004
8B8E
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BU of 8b8e by Molmil
Wild-type GH11 from Blastobotrys mokoenaii
分子名称: 1,2-ETHANEDIOL, BmGH11, DI(HYDROXYETHYL)ETHER, ...
著者Coleman, T, Ravn, J.L, Larsbrink, J.
登録日2022-10-04
公開日2023-05-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Yeasts Have Evolved Divergent Enzyme Strategies To Deconstruct and Metabolize Xylan.
Microbiol Spectr, 11, 2023
3B63
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Actin filament model in the extended form of acromsomal bundle in the Limulus sperm
分子名称: Actin
著者Cong, Y, Topf, M, Sali, A, Matsudaira, P, Dougherty, M, Chiu, W, Schmid, M.F.
登録日2007-10-26
公開日2008-11-18
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献Crystallographic conformers of actin in a biologically active bundle of filaments.
J.Mol.Biol., 375, 2008
1Y4C
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Designed Helical Protein fusion MBP
分子名称: Maltose binding protein fused with designed helical protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者LaPorte, S.L, Forsyth, C.M, Cunningham, B.C, Miercke, L.J, Akhavan, D, Stroud, R.M.
登録日2004-11-30
公開日2005-02-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献De novo design of an IL-4 antagonist and its structure at 1.9 A.
Proc.Natl.Acad.Sci.Usa, 102, 2005
3BI4
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BU of 3bi4 by Molmil
Crystal structures of fms1 in complex with its inhibitors
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, N-[(1E,2Z)-but-2-en-1-ylidene]-N'-[(2E)-but-2-en-1-ylidene]butane-1,4-diamine, Polyamine oxidase FMS1
著者Huang, Q, Hao, Q.
登録日2007-11-29
公開日2008-01-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of fms1 in complex with its inhibitors
To be Published
3BDF
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Crystal structure of metal-free E. coli alkaline phosphatase (T155V)
分子名称: Alkaline phosphatase, SULFATE ION
著者Grigg, J.C, Murphy, M.E.
登録日2007-11-14
公開日2008-11-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The Active-Site Trimetallic Cluster of Alkaline Phosphatase is Lost Upon Isosteric Mutation at the Mg2+-Coordinating Residue Threonine-155
To be Published
3BAB
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BU of 3bab by Molmil
Structural Basis for the Inhibition of Bacterial NAD+ Dependent DNA Ligase
分子名称: 7-amino-2-tert-butyl-4-(4-pyrimidin-2-ylpiperazin-1-yl)pyrido[2,3-d]pyrimidine-6-carboxamide, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase, ...
著者Pinko, C.
登録日2007-11-07
公開日2008-11-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for the Inhibition of Bacterial NAD+ Dependent DNA Ligase
To be Published
1YHF
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BU of 1yhf by Molmil
Crystal Structure of Conserved SPY1581 Protein of Unknown Function from Streptococcus pyogenes
分子名称: hypothetical protein SPy1581
著者Osipiuk, J, Lezondra, L, Moy, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2005-01-07
公開日2005-02-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray crystal structure of conserved hypothetical SPy1581 protein from Streptococcus pyogenes.
To be Published
1YHL
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Structure of the complex of Trypanosoma cruzi farnesyl diphosphate synthase with risedronate, dmapp and mg+2
分子名称: 1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID, DIMETHYLALLYL DIPHOSPHATE, MAGNESIUM ION, ...
著者Gabelli, S.B, McLellan, J.S, Montalvetti, A, Oldfield, E, Docampo, R, Amzel, L.M.
登録日2005-01-09
公開日2005-12-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure and mechanism of the farnesyl diphosphate synthase from Trypanosoma cruzi: Implications for drug design.
Proteins, 62, 2005
1Y3G
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Crystal Structure of a Silanediol Protease Inhibitor Bound to Thermolysin
分子名称: (2S)-2-{[(AMINOMETHYL)(DIHYDROXY)SILYL]METHYL}-4-METHYLPENTANAL, 3-PHENYLPROPANAL, CALCIUM ION, ...
著者Juers, D.H, Kim, J, Matthews, B.W, Sieburth, S.M.
登録日2004-11-24
公開日2006-01-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Analysis of Silanediols as Transition-State-Analogue Inhibitors of the Benchmark Metalloprotease Thermolysin(,).
Biochemistry, 44, 2005
1YHG
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Uncyclized precursor structure of S65G Y66S V68G GFP variant
分子名称: green fluorescent protein
著者Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-01-07
公開日2005-02-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Understanding GFP Chromophore Biosynthesis: Controlling Backbone Cyclization and Modifying Post-translational Chemistry.
Biochemistry, 44, 2005
6UWF
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GltPh in complex with L-aspartate and sodium ions in outward-facing state
分子名称: ASPARTIC ACID, Glutamate transporter homolog, [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate
著者Wang, X, Boudker, O.
登録日2019-11-05
公開日2020-06-03
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Use of paramagnetic 19 F NMR to monitor domain movement in a glutamate transporter homolog.
Nat.Chem.Biol., 16, 2020
1ZF9
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GGG Duplex A-DNA
分子名称: 5'-D(*CP*CP*CP*CP*CP*GP*GP*GP*GP*G)-3', SODIUM ION
著者Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
登録日2005-04-20
公開日2005-05-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
6UZ8
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Cryo-EM structure of human TRPC6 in complex with agonist AM-0883
分子名称: (5-chloro-1'H-spiro[indole-3,4'-piperidin]-1'-yl)[(2R)-2,3-dihydro-1,4-benzodioxin-2-yl]methanone, 2-[[(2~{S})-2-decanoyloxy-3-dodecanoyloxy-propoxy]-oxidanyl-phosphoryl]oxyethyl-trimethyl-azanium, CHOLESTEROL HEMISUCCINATE, ...
著者Bai, Y, Yu, X, Huang, X, Chen, H.
登録日2019-11-14
公開日2020-03-18
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Structural basis for pharmacological modulation of the TRPC6 channel.
Elife, 9, 2020
1ZFM
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AGC Duplex B-DNA
分子名称: 5'-D(*CP*CP*GP*CP*TP*AP*GP*CP*GP*G)-3'
著者Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
登録日2005-04-20
公開日2005-05-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1ZG1
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NarL complexed to nirB promoter non-palindromic tail-to-tail DNA site
分子名称: 5'-D(*CP*GP*TP*AP*CP*CP*CP*AP*TP*TP*AP*AP*GP*GP*AP*GP*TP*AP*CP*G)-3', 5'-D(*CP*GP*TP*AP*CP*TP*CP*CP*TP*TP*AP*AP*TP*GP*GP*GP*TP*AP*CP*G)-3', Nitrate/nitrite response regulator protein narL, ...
著者Maris, A.E, Kaczor-Grzeskowiak, M, Ma, Z, Kopka, M.L, Gunsalus, R.P, Dickerson, R.E.
登録日2005-04-20
公開日2005-11-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Primary and Secondary Modes of DNA Recognition by the NarL Two-Component Response Regulator.
Biochemistry, 44, 2005
1ZP8
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HIV Protease with inhibitor AB-2
分子名称: Pol polyprotein, [1-((1S,2R)-1-BENZYL-2-HYDROXY-3-{ISOBUTYL[(4-METHOXYPHENYL)SULFONYL]AMINO}PROPYL)-1H-1,2,3-TRIAZOL-4-YL]METHYL (1R,2R)-2-HYDROXY-2,3-DIHYDRO-1H-INDEN-1-YLCARBAMATE
著者Brik, A, Alexandratos, J.N, Elder, J.H, Olson, A.J, Wlodawer, A, Goodsell, D.S, Wong, C.H.
登録日2005-05-16
公開日2005-06-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献1,2,3-triazole as a peptide surrogate in the rapid synthesis of HIV-1 protease inhibitors.
Chembiochem, 6, 2005
3B1L
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Crystal Structure of parkin ubiquitin-like domain R33Q mutant
分子名称: E3 ubiquitin-protein ligase parkin
著者Tomoo, K, Ikemiya, A, Amami, Y, In, Y, Ishida, T.
登録日2011-07-04
公開日2012-07-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of parkin ubiquitin-like domain R33Q mutant
to be published
3B5X
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Crystal Structure of MsbA from Vibrio cholerae
分子名称: Lipid A export ATP-binding/permease protein msbA
著者Ward, A, Reyes, C.L, Yu, J, Roth, C.B, Chang, G.
登録日2007-10-26
公開日2007-12-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (5.5 Å)
主引用文献Flexibility in the ABC transporter MsbA: Alternating access with a twist.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3B35
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Crystal structure of the M180A mutant of the aminopeptidase from Vibrio proteolyticus
分子名称: Bacterial leucyl aminopeptidase, SODIUM ION, THIOCYANATE ION, ...
著者Ataie, N.J, Hoang, Q.Q, Petsko, G.A, Ringe, D.
登録日2007-10-19
公開日2007-11-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Zinc coordination geometry and ligand binding affinity: the structural and kinetic analysis of the second-shell serine 228 residue and the methionine 180 residue of the aminopeptidase from Vibrio proteolyticus.
Biochemistry, 47, 2008
3B49
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Crystal structure of an uncharacterized conserved protein from Listeria innocua
分子名称: GLYCEROL, Lin2189 protein
著者Nocek, B, Duggan, E, Freeman, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2007-10-23
公開日2007-11-13
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of an uncharacterized conserved protein from Listeria innocua.
To be Published
3B9L
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Human serum albumin complexed with myristate and AZT
分子名称: 3'-azido-3'-deoxythymidine, MYRISTIC ACID, Serum albumin
著者Zhu, L, Yang, F, Chen, L, Meehan, E.J, Huang, M.
登録日2007-11-05
公開日2008-05-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A new drug binding subsite on human serum albumin and drug-drug interaction studied by X-ray crystallography
J.Struct.Biol., 162, 2008

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