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2P7E
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Vanadate at the Active Site of a Small Ribozyme Suggests a Role for Water in Transition-State Stabilization
分子名称: 3' substrate strand, octameric fragment, 5' substrate strand, ...
著者Torelli, A.T, Krucinska, J, Wedekind, J.E.
登録日2007-03-20
公開日2007-05-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献A comparison of vanadate to a 2'-5' linkage at the active site of a small ribozyme suggests a role for water in transition-state stabilization
Rna, 13, 2007
3EP4
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BU of 3ep4 by Molmil
Human AdoMetDC E256Q mutant with no putrescine bound
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PYRUVIC ACID, S-adenosylmethionine decarboxylase alpha chain, ...
著者Bale, S, Lopez, M.M, Makhatadze, G.I, Fang, Q, Pegg, A.E, Ealick, S.E.
登録日2008-09-29
公開日2008-12-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural Basis for Putrescine Activation of Human S-Adenosylmethionine Decarboxylase.
Biochemistry, 47, 2008
2P5P
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BU of 2p5p by Molmil
Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III
分子名称: Genome polyprotein
著者Gao, F, Yuan, F, Gao, G.F.
登録日2007-03-16
公開日2008-03-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III
To be Published
1ZUW
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BU of 1zuw by Molmil
Crystal structure of B.subtilis glutamate racemase (RacE) with D-Glu
分子名称: D-GLUTAMIC ACID, glutamate racemase 1
著者Ruzheinikov, S.N, Taal, M.A, Sedelnikova, S.E, Baker, P.J, Rice, D.W.
登録日2005-06-01
公開日2005-12-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Substrate-Induced Conformational Changes in Bacillus subtilis Glutamate Racemase and Their Implications for Drug Discovery
Structure, 13, 2005
3EP7
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BU of 3ep7 by Molmil
Human AdoMetDC E256Q mutant complexed with S-Adenosylmethionine methyl ester and no putrescine bound
分子名称: PYRUVIC ACID, S-ADENOSYLMETHIONINE METHYL ESTER, S-adenosylmethionine decarboxylase alpha chain, ...
著者Bale, S, Lopez, M.M, Makhatadze, G.I, Fang, Q, Pegg, A.E, Ealick, S.E.
登録日2008-09-29
公開日2008-12-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for Putrescine Activation of Human S-Adenosylmethionine Decarboxylase.
Biochemistry, 47, 2008
7JH5
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BU of 7jh5 by Molmil
Co-LOCKR: de novo designed protein switch
分子名称: Co-LOCKR: de novo designed protein switch
著者Bick, M.J, Lajoie, M.J, Boyken, S.E, Sankaran, B, Baker, D.
登録日2020-07-20
公開日2020-09-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.103 Å)
主引用文献Designed protein logic to target cells with precise combinations of surface antigens.
Science, 369, 2020
7JI2
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BU of 7ji2 by Molmil
Crystal Structure of H2-Kb in complex with a OVA mutant peptide
分子名称: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ...
著者Li, X, Mallis, R.J, Mizsei, R, Tan, K, Reinherz, E.L, Wang, J.
登録日2020-07-22
公開日2020-12-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Pre-T cell receptors topologically sample self-ligands during thymocyte beta-selection.
Science, 371, 2021
3GO7
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BU of 3go7 by Molmil
Crystal Structure of M. tuberculosis ribokinase (Rv2436) in complex with ribose
分子名称: MAGNESIUM ION, RIBOKINASE RBSK, alpha-D-ribofuranose
著者Masters, E.I, Sun, Y, Wang, Y, Parker, W.B, Li, R.
登録日2009-03-18
公開日2010-03-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure and biochemical characterization of M.tuberculosis ribokinase (Rv2436)
To be Published
1UM5
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BU of 1um5 by Molmil
Catalytic Antibody 21H3 with alcohol substrate
分子名称: 1-PHENYLETHANOL, Antibody 21H3 H chain, Antibody 21H3 L chain
著者Beuscher IV, A.E, Reuter, J, Olson, A.J, Romesberg, F.E, Schultz, P.G, Wirsching, P, Janda, K.D, Lerner, R.A, Stevens, R.C.
登録日2003-09-23
公開日2004-10-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Studies of an Efficient Catalytic Antibody Operating by Ping-Pong and Induced Fit Mechanisms
To be Published
7YHJ
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BU of 7yhj by Molmil
Effector binding domain of LysR-Type transcription factor LrhA from E. coli
分子名称: DI(HYDROXYETHYL)ETHER, Probable HTH-type transcriptional regulator LrhA, SULFATE ION
著者Xie, C, Jiang, X.
登録日2022-07-13
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.237 Å)
主引用文献Effector binding domain of LysR-Type transcription factor LrhA from E. coli
To Be Published
7MPG
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BU of 7mpg by Molmil
Cryo-EM structure of Prefusion-stabilized RSV F (DS-Cav1) in complex with Fab AM14
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AM14 Fab Heavy Chain, AM14 Fab Light Chain, ...
著者Abeyrathne, P.D, Malito, E, Harshbarger, W.D.
登録日2021-05-04
公開日2021-09-08
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Improved epitope resolution of the prefusion trimer-specific antibody AM14 bound to the RSV F glycoprotein.
Mabs, 13
6CRT
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BU of 6crt by Molmil
Arg65Gln Mutagenic E.coli PCK
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, Phosphoenolpyruvate carboxykinase (ATP)
著者Sokaribo, A.S, Cotelesage, J.H, Novakovski, B, Goldie, H, Sanders, D.
登録日2018-03-19
公開日2018-04-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.995 Å)
主引用文献Arg65Gln Mutagenic E.coli PCK
To Be Published
4BQJ
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BU of 4bqj by Molmil
structure of HSP90 with an inhibitor bound
分子名称: 5-[2,4-dihydroxy-6-(4-nitrophenoxy)phenyl]-N-ethyl-1,2-oxazole-3-carboxamide, HEAT SHOCK PROTEIN HSP 90-ALPHA
著者Casale, E, Brasca, M.G, Mantegani, S, Amboldi, N, Bindi, S, Caronni, D, Ceccarelli, W, Colombo, N, DePonti, A, Donati, D, Ermoli, A, Fachin, G, Felder, E.R, Ferguson, R.D, Fiorelli, C, Guanci, M, Isacchi, A, Pesenti, E, Polucci, P, Riceputi, L, Sola, F, Visco, C, Zuccotto, F, Fogliatto, G.
登録日2013-05-30
公開日2013-10-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of Nms-E973 as Novel, Selective and Potent Inhibitor of Heat Shock Protein 90 (Hsp90).
Bioorg.Med.Chem., 21, 2013
3E68
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BU of 3e68 by Molmil
Structure of murine INOS oxygenase domain with inhibitor AR-C130232
分子名称: 1,2-ETHANEDIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, N-[2-(6-AMINO-4-METHYLPYRIDIN-2-YL)ETHYL]-4-CYANOBENZAMIDE, ...
著者Garcin, E.D, Arvai, A.S, Rosenfeld, R.J, Kroeger, M.D, Crane, B.R, Andersson, G, Andrews, G, Hamley, P.J, Mallinder, P.R, Nicholls, D.J, St-Gallay, S.A, Tinker, A.C, Gensmantel, N.P, Mete, A, Cheshire, D.R, Connolly, S, Stueh, D.J, Aberg, A, Wallace, A.V, Tainer, J.A, Getzoff, E.D.
登録日2008-08-14
公開日2008-10-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase.
Nat.Chem.Biol., 4, 2008
3OZM
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BU of 3ozm by Molmil
Crystal structure of enolase superfamily member from Bordetella bronchiseptica complexed with Mg, m-Xylarate and L-Lyxarate
分子名称: D-xylaric acid, GLYCEROL, L-arabinaric acid, ...
著者Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C.
登録日2010-09-25
公開日2011-09-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of enolase superfamily member from Bordetella bronchiseptica complexed with Mg, m-Xylarate and L-Lyxarate
TO BE PUBLISHED
1UXP
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BU of 1uxp by Molmil
Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) from Thermoproteus tenax
分子名称: ADENOSINE MONOPHOSPHATE, GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+), NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Lorentzen, E, Hensel, R, Pohl, E.
登録日2004-02-27
公開日2004-08-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural Basis of Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde 3-Phosphate Dehydrogenase from Thermoproteus Tenax
J.Mol.Biol., 341, 2004
3E6I
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BU of 3e6i by Molmil
Human cytochrome P450 2E1 in complex with the inhibitor indazole
分子名称: 1H-indazole, Cytochrome P450 2E1, PROTOPORPHYRIN IX CONTAINING FE
著者Porubsky, P.R, Meneely, K.M, Scott, E.E.
登録日2008-08-15
公開日2008-09-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structures of human cytochrome P450 2E1: insights into the binding of inhibitors and both small molecular weight and fatty acid substrates.
J.Biol.Chem., 283, 2008
7Y0G
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BU of 7y0g by Molmil
Crystal structure of anti-mPEG h15-2b Fab
分子名称: 15-2b heavy chain, 15-2b light chain, 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL
著者Chang, C.Y, Nguyen, T.M.T, Lin, E.C, Su, Y.C.
登録日2022-06-05
公開日2022-08-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structural determination of an antibody that specifically recognizes polyethylene glycol with a terminal methoxy group.
Commun Chem, 5, 2022
1GME
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BU of 1gme by Molmil
Crystal structure and assembly of an eukaryotic small heat shock protein
分子名称: HEAT SHOCK PROTEIN 16.9B
著者Van Montfort, R.L.M, Basha, E, Friedrich, K.L, Slingsby, C, Vierling, E.
登録日2001-09-13
公開日2001-11-29
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure and Assembly of an Eukaryotic Small Heat Shock Protein
Nat.Struct.Biol., 8, 2001
7XW6
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BU of 7xw6 by Molmil
TSHR-Gs-M22 antibody-ML109 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Duan, J, Xu, P, Luan, X, Ji, Y, Yuan, Q, He, X, Ye, J, Cheng, X, Jiang, H, Zhang, S, Jiang, Y, Xu, H.E.
登録日2022-05-26
公開日2022-08-17
最終更新日2022-10-05
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献Hormone- and antibody-mediated activation of the thyrotropin receptor.
Nature, 609, 2022
2CLQ
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BU of 2clq by Molmil
Structure of mitogen-activated protein kinase kinase kinase 5
分子名称: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5, STAUROSPORINE
著者Bunkoczi, G, Salah, E, Fedorov, O, Pike, A, Gileadi, O, von Delft, F, Arrowsmith, C, Edwards, A, Sundstrom, M, Weigelt, J, Knapp, S.
登録日2006-04-28
公開日2006-05-09
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and Functional Characterization of the Human Protein Kinase Ask1.
Structure, 15, 2007
1ULI
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BU of 1uli by Molmil
Biphenyl dioxygenase (BphA1A2) derived from Rhodococcus sp. strain RHA1
分子名称: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, biphenyl dioxygenase large subunit, ...
著者Furusawa, Y, Nagarajan, V, Masai, E, Tanokura, M, Fukuda, M, Senda, T.
登録日2003-09-12
公開日2004-09-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of the Terminal Oxygenase Component of Biphenyl Dioxygenase Derived from Rhodococcus sp. Strain RHA1
J.Mol.Biol., 342, 2004
3M32
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BU of 3m32 by Molmil
Structural Insight into Methyl-Coenzyme M Reductase Chemistry using Coenzyme B Analogues
分子名称: 1,2-ETHANEDIOL, 1-THIOETHANESULFONIC ACID, ACETATE ION, ...
著者Cedervall, P.E, Dey, M, Ragsdale, S.W, Wilmot, C.M.
登録日2010-03-08
公開日2010-09-15
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural insight into methyl-coenzyme M reductase chemistry using coenzyme B analogues.
Biochemistry, 49, 2010
4KHB
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BU of 4khb by Molmil
Structure of the Spt16D Pob3N heterodimer
分子名称: SULFATE ION, Uncharacterized protein POB3N, Uncharacterized protein SPT16D
著者Stuwe, T, Zhang, E, Ladurner, A.G.
登録日2013-04-30
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of histone H2A-H2B recognition by the essential chaperone FACT.
Nature, 499, 2013
1P4J
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Crystal structure of glycogen phosphorylase b in complex with C-(1-hydroxy-beta-D-glucopyranosyl)formamide
分子名称: (2R,3R,4S,5S,6R)-2,3,4,5-tetrahydroxy-6-(hydroxymethyl)oxane-2-carboxamide, Glycogen phosphorylase, muscle form, ...
著者Chrysina, E.D, Oikonomakos, N.G, Zographos, S.E, Kosmopoulou, M.N, Bischler, N, Leonidas, D.D, Nagy, V, Somsak, L, Gergely, P, Praly, J.-P.
登録日2003-04-23
公開日2004-05-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crsytallographic Studies on alpha- and beta-D-glucopyranosyl Formamide Analogues, Inhibitors of Glycogen Phosphorylase
Biocatal.Biotransfor., 21, 2003

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