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6C33
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Mycobacterium smegmatis DNA flap endonuclease
分子名称: 5'-3' exonuclease, MANGANESE (II) ION
著者Shuman, S, Goldgur, Y, Carl, A, Uson, M.L.
登録日2018-01-09
公開日2018-03-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure and mutational analysis of Mycobacterium smegmatis FenA highlight active site amino acids and three metal ions essential for flap endonuclease and 5' exonuclease activities.
Nucleic Acids Res., 46, 2018
3SAY
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BU of 3say by Molmil
Crystal structure of human glycogen synthase kinase 3 beta (GSK3b) in complex with inhibitor 142
分子名称: (3Z)-N,N-diethyl-3-[(3E)-3-(hydroxyimino)-1,3-dihydro-2H-indol-2-ylidene]-2-oxo-2,3-dihydro-1H-indole-5-sulfonamide, (4S)-2-METHYL-2,4-PENTANEDIOL, FORMIC ACID, ...
著者Mazanetz, M.P, Cheng, R.K.Y, Rowan, F, Laughton, C.A, Barker, J.J, Fischer, P.M.
登録日2011-06-03
公開日2012-06-13
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.231 Å)
主引用文献Crystal structure of human glycogen synthase kinase 3 beta (GSK3b) in complex with inhibitor 142
To be Published
8DSL
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Peptidylglycine alpha hydroxylating monooxygenase, Q272E
分子名称: COPPER (II) ION, GLYCEROL, Peptidylglycine alpha-amidating monooxygenase
著者Arias, R.J, Blackburn, N.J.
登録日2022-07-22
公開日2023-03-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献New structures reveal flexible dynamics between the subdomains of peptidylglycine monooxygenase. Implications for an open to closed mechanism.
Protein Sci., 32, 2023
1FC9
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PHOTOSYSTEM II D1 C-TERMINAL PROCESSING PROTEASE
分子名称: PHOTOSYSTEM II D1 PROTEASE
著者Liao, D.I, Qian, J, Chisholm, D.A, Jordan, D.B, Diner, B.A.
登録日2000-07-18
公開日2001-01-18
最終更新日2018-04-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of the photosystem II D1 C-terminal processing protease.
Nat.Struct.Biol., 7, 2000
5N1J
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Crystal structure of the polysaccharide deacetylase Bc1974 from Bacillus cereus
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Peptidoglycan N-acetylglucosamine deacetylase, ...
著者Giastas, P, Andreou, A, Balomenou, S, Bouriotis, V, Eliopoulos, E.E.
登録日2017-02-06
公開日2018-02-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of the Peptidoglycan N-Acetylglucosamine Deacetylase Bc1974 and Its Complexes with Zinc Metalloenzyme Inhibitors.
Biochemistry, 57, 2018
6VH9
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FphF, Staphylococcus aureus fluorophosphonate-binding serine hydrolases F, apo form
分子名称: Esterase family protein, SODIUM ION
著者Fellner, M, Jamieson, S.A, Brewster, J.L, Mace, P.D.
登録日2020-01-09
公開日2020-09-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Structural Basis for the Inhibitor and Substrate Specificity of the Unique Fph Serine Hydrolases of Staphylococcus aureus .
Acs Infect Dis., 6, 2020
6LQ2
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BU of 6lq2 by Molmil
Crystal Structure of E447A Acyl-CoA Dehydrogenase FadE5 mutant from Mycobacteria smegmatis in complex with C10CoA
分子名称: Acyl-CoA dehydrogenase, COENZYME A, DECANOIC ACID, ...
著者Liu, X, Chen, X.B.
登録日2020-01-12
公開日2020-07-01
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for the broad substrate specificity of two acyl-CoA dehydrogenases FadE5 from mycobacteria.
Proc.Natl.Acad.Sci.USA, 117, 2020
8DSJ
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Peptidylglycine alpha hydroxylating monooxygenase anaerobic
分子名称: COPPER (II) ION, GLYCEROL, Peptidylglycine alpha-amidating monooxygenase
著者Arias, R.J, Blackburn, N.J.
登録日2022-07-22
公開日2023-03-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献New structures reveal flexible dynamics between the subdomains of peptidylglycine monooxygenase. Implications for an open to closed mechanism.
Protein Sci., 32, 2023
6C49
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Crystal Structure of Alcohol Dehydrogenase from Acinetobacter baumannii
分子名称: 1,2-ETHANEDIOL, Alcohol dehydrogenase, DI(HYDROXYETHYL)ETHER, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2018-01-11
公開日2018-01-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of Alcohol Dehydrogenase from Acinetobacter baumannii
To be Published
5MYY
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BU of 5myy by Molmil
Hen Egg-White Lysozyme (HEWL) cocrystallized in the presence of Cadmium sulphate
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
著者Panneerselvam, S, Burkhardt, A, Meents, A.
登録日2017-01-30
公開日2017-07-12
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Rapid cadmium SAD phasing at the standard wavelength (1 angstrom ).
Acta Crystallogr D Struct Biol, 73, 2017
5MZ8
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Crystal structure of aldehyde dehydrogenase 21 (ALDH21) from Physcomitrella patens in complex with the reaction product succinate
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Kopecny, D, Vigouroux, A, Briozzo, P, Morera, S.
登録日2017-01-31
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The ALDH21 gene found in lower plants and some vascular plants codes for a NADP(+) -dependent succinic semialdehyde dehydrogenase.
Plant J., 92, 2017
6C4K
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Full length hUGDH with A104L substitution in the absence of ligand
分子名称: PHOSPHATE ION, SODIUM ION, UDP-glucose 6-dehydrogenase
著者Beattie, N.R, Pioso, B.J, Wood, Z.A.
登録日2018-01-12
公開日2018-05-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Hysteresis and Allostery in Human UDP-Glucose Dehydrogenase Require a Flexible Protein Core.
Biochemistry, 57, 2018
4WZJ
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Spliceosomal U4 snRNP core domain
分子名称: Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, Small nuclear ribonucleoprotein G, ...
著者Leung, A.K.W, Nagai, K, Li, J.
登録日2014-11-19
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structure of the spliceosomal U4 snRNP core domain and its implication for snRNP biogenesis.
Nature, 473, 2011
6V52
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IDO1 IN COMPLEX WITH COMPOUND 1
分子名称: 3-chloro-N-{4-[1-(propylcarbamoyl)cyclobutyl]phenyl}benzamide, Indoleamine 2,3-dioxygenase 1
著者Lesburg, C.A, Koenig, K.V, Augustin, M.A.
登録日2019-12-03
公開日2020-04-08
最終更新日2020-04-29
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Strategic Incorporation of Polarity in Heme-Displacing Inhibitors of Indoleamine-2,3-dioxygenase-1 (IDO1).
Acs Med.Chem.Lett., 11, 2020
8B4O
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BU of 8b4o by Molmil
Cryo-EM structure of cytochrome bd oxidase from C. glutamicum
分子名称: CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, Cytochrome BD ubiquinol oxidase subunit I, Cytochrome bd-type quinol oxidase subunit II, ...
著者Grund, T.N, Kusumoto, T, Michel, H, Sakamoto, J, Safarian, S.
登録日2022-09-20
公開日2022-12-28
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Cryo-EM structure of cytochrome bd oxidase from C. glutamicum
To be published
5LZV
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BU of 5lzv by Molmil
Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
著者Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S.
登録日2016-10-02
公開日2016-11-30
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.
Cell, 167, 2016
6UR0
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BU of 6ur0 by Molmil
Crystal structure of ChoE D285N mutant acyl-enzyme
分子名称: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, ChoE, GLYCEROL
著者Pham, V.D, Shi, R.
登録日2019-10-21
公開日2020-05-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into the putative bacterial acetylcholinesterase ChoE and its substrate inhibition mechanism.
J.Biol.Chem., 295, 2020
5LZ8
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Fragment-based inhibitors of Lipoprotein associated Phospholipase A2
分子名称: 5-[2-[(4~{S})-4-~{tert}-butyl-2-oxidanylidene-pyrrolidin-1-yl]ethoxy]-2-fluoranyl-benzenecarbonitrile, CHLORIDE ION, Platelet-activating factor acetylhydrolase
著者Woolford, A, Day, P.
登録日2016-09-29
公開日2016-12-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Fragment-Based Approach to the Development of an Orally Bioavailable Lactam Inhibitor of Lipoprotein-Associated Phospholipase A2 (Lp-PLA2).
J. Med. Chem., 59, 2016
5LZM
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COMPARISON OF THE CRYSTAL STRUCTURE OF BACTERIOPHAGE T4 LYSOZYME AT LOW, MEDIUM, AND HIGH IONIC STRENGTHS
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, T4 LYSOZYME
著者Bell, J.A, Wilson, K, Zhang, X.-J, Faber, H.R, Nicholson, H, Matthews, B.W.
登録日1991-01-25
公開日1992-07-15
最終更新日2021-06-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Comparison of the crystal structure of bacteriophage T4 lysozyme at low, medium, and high ionic strengths.
Proteins, 10, 1991
6GZW
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BU of 6gzw by Molmil
Ferric DtpA from Streptomyces lividans
分子名称: Dye type peroxidase A, PROTOPORPHYRIN IX CONTAINING FE
著者Moreno Chicano, T, Worrall, J.A.R, Hough, M.A.
登録日2018-07-05
公開日2019-05-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献An Aromatic Dyad Motif in Dye Decolourising Peroxidases Has Implications for Free Radical Formation and Catalysis.
Chemistry, 25, 2019
5M3A
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Crystal structure of BRD4 BROMODOMAIN 1 IN COMPLEX WITH LIGAND 2
分子名称: 1,2-ETHANEDIOL, 3-methyl-6-(1-methyl-5-phenoxy-pyrazol-4-yl)-[1,2,4]triazolo[4,3-b]pyridazine, Bromodomain-containing protein 4
著者Kessler, D, Mayer, M, Engelhardt, H, Wolkerstorfer, B, Geist, L.
登録日2016-10-14
公開日2017-09-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Direct NMR Probing of Hydration Shells of Protein Ligand Interfaces and Its Application to Drug Design.
J. Med. Chem., 60, 2017
4X6A
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BU of 4x6a by Molmil
Crystal structure of yeast RNA polymerase II encountering oxidative Cyclopurine DNA lesions
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Wang, L, Chong, J, Wang, D.
登録日2014-12-07
公開日2015-02-04
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (3.96 Å)
主引用文献Mechanism of RNA polymerase II bypass of oxidative cyclopurine DNA lesions.
Proc.Natl.Acad.Sci.USA, 112, 2015
6H3N
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Structure of VgrG1 in the Type VI secretion VgrG1-Tse6-EF-Tu complex embedded in lipid nanodiscs
分子名称: VgrG1
著者Quentin, D, Raunser, S.
登録日2018-07-19
公開日2018-09-12
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Mechanism of loading and translocation of type VI secretion system effector Tse6.
Nat Microbiol, 3, 2018
3ANP
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Crystal structure of Thermus thermophilus FadR, a TetR familly transcriptional repressor, in complex with lauroyl-CoA.
分子名称: DODECYL-COA, LAURIC ACID, Transcriptional repressor, ...
著者Agari, Y, Agari, K, Sakamoto, K, Kuramitsu, S, Shinkai, A.
登録日2010-09-06
公開日2011-03-09
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献TetR-family transcriptional repressor Thermus thermophilus FadR controls fatty acid degradation.
Microbiology, 157, 2011
6VA9
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Crystal structure of glucose-6-phosphate dehydrogenase R393H mutant in complex with catalytic NADP+
分子名称: Glucose-6-phosphate 1-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Horikoshi, N, Mochly-Rosen, D, Wakatsuki, S.
登録日2019-12-17
公開日2021-01-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.95 Å)
主引用文献Long-range structural defects by pathogenic mutations in most severe glucose-6-phosphate dehydrogenase deficiency.
Proc.Natl.Acad.Sci.USA, 118, 2021

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