Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

9CA2
DownloadVisualize
BU of 9ca2 by Molmil
ENGINEERING THE HYDROPHOBIC POCKET OF CARBONIC ANHYDRASE II
分子名称: CARBONIC ANHYDRASE II, MERCURY (II) ION, ZINC ION
著者Alexander, R.S, Christianson, D.W.
登録日1991-07-09
公開日1992-07-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Engineering the hydrophobic pocket of carbonic anhydrase II.
Biochemistry, 30, 1991
8W3A
DownloadVisualize
BU of 8w3a by Molmil
Crystal structure of Shewanella benthica Group 1 truncated hemoglobin C51S C71S variant with trans heme D
分子名称: Group 1 truncated hemoglobin, PROTOPORPHYRIN IX CONTAINING FE, {3-[(2R,5'R)-9',14'-diethenyl-5'-hydroxy-5',10',15',19'-tetramethyl-5-oxo-4,5-dihydro-3H-spiro[furan-2,4'-[21,22,23,24]tetraazapentacyclo[16.2.1.13,6.18,11.113,16]tetracosa[1,3(24),6,8,10,12,14,16(22),17,19]decaen]-20'-yl-kappa~4~N~21'~,N~22'~,N~23'~,N~24'~]propanoato}iron
著者Lecomte, J.T.J, Schlessman, J.L, Schultz, T.D, Siegler, M.A.
登録日2024-02-22
公開日2024-04-03
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Heme d formation in a Shewanella benthica hemoglobin.
J.Inorg.Biochem., 259, 2024
9BON
DownloadVisualize
BU of 9bon by Molmil
Crystal structure of glucosyltransferase (GTD) domain of TpeL
分子名称: TpeL
著者Gill, S, Sugiman-Marangos, S.N, Beilhartz, G.L, Mei, E, Taipale, M, Melnyk, R.A.
登録日2024-05-05
公開日2024-08-07
実験手法X-RAY DIFFRACTION (2.222 Å)
主引用文献A diphtheria toxin-like intracellular delivery platform that evades pre-existing antidrug antibodies.
Embo Mol Med, 2024
8WBN
DownloadVisualize
BU of 8wbn by Molmil
Crystal structure of cis-Epoxysuccinate Hydrolases RhCESH[L] mutant D193N
分子名称: Epoxide hydrolase, SULFATE ION
著者Dong, S, Xuan, J.S, Feng, Y.G, Cui, Q.
登録日2023-09-10
公開日2024-01-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Deciphering the stereo-specific catalytic mechanisms of cis-epoxysuccinate hydrolases producing L(+)-tartaric acid.
J.Biol.Chem., 300, 2024
8XIG
DownloadVisualize
BU of 8xig by Molmil
The crystal structure of the AEP domain of MPXV E5
分子名称: MAGNESIUM ION, PYROPHOSPHATE, Uncoating factor OPG117
著者Gan, J, Zhang, W.
登録日2023-12-19
公開日2024-05-01
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and functional insights into the helicase protein E5 of Mpox virus.
Cell Discov, 10, 2024
8VON
DownloadVisualize
BU of 8von by Molmil
Double phenylalanine Apex domain mutant of bacteriophage P2 central spike protein, membrane-piercing module
分子名称: PHOSPHATIDYLETHANOLAMINE, Spike protein
著者Leiman, P.G, Miller, J.M.
登録日2024-01-15
公開日2024-08-07
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Function of the bacteriophage P2 baseplate central spike Apex domain in the infection process.
bioRxiv, 2023
9C0B
DownloadVisualize
BU of 9c0b by Molmil
E.coli GroEL + PBZ1587 inhibitor
分子名称: 60 kDa chaperonin, N-(2-{4-[4-(aminomethyl)benzene-1-sulfonamido]phenyl}-1,3-benzoxazol-5-yl)-5-chlorothiophene-2-sulfonamide
著者Watson, E.R, Lander, G.C.
登録日2024-05-25
公開日2024-08-07
最終更新日2024-08-14
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Bis-sulfonamido-2-phenylbenzoxazoles Validate the GroES/EL Chaperone System as a Viable Antibiotic Target.
J.Am.Chem.Soc., 146, 2024
8WQD
DownloadVisualize
BU of 8wqd by Molmil
Local refinement of FEM1B bound with the C-degron of CCC89
分子名称: Coiled-coil domain-containing protein 89, Protein fem-1 homolog B
著者Chen, X, Zhang, K, Xu, C.
登録日2023-10-11
公開日2024-04-03
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.55 Å)
主引用文献Mechanism of Psi-Pro/C-degron recognition by the CRL2 FEM1B ubiquitin ligase.
Nat Commun, 15, 2024
9B9L
DownloadVisualize
BU of 9b9l by Molmil
RPRD1B C-terminal interacting domain bound to a pThr4 CTD peptide
分子名称: Regulation of nuclear pre-mRNA domain-containing protein 1B, SER-PRO-THR-SER-PRO-SER-TYR-SER-PRO-TPO-SER-PRO-SER-TYR-SER
著者Moreno, R.Y, Zhang, Y.J.
登録日2024-04-02
公開日2024-08-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Thr4 phosphorylation primes Ser2 phosphorylation on RNA polymerase II and mediates regulation in elongation and 3'end processing
To Be Published
9B0M
DownloadVisualize
BU of 9b0m by Molmil
Crystal structure of Macrophage migration inhibitory factor from Plasmodium vivax
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, L-dopachrome isomerase
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-03-12
公開日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Macrophage migration inhibitory factor from Plasmodium vivax
To be published
8XXM
DownloadVisualize
BU of 8xxm by Molmil
Cryo-EM structure of the human 40S ribosome with PDCD4 and eIF3G
分子名称: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Ye, X, Huang, Z, Li, Y, Wang, M, Cheng, J.
登録日2024-01-18
公開日2024-05-01
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Human tumor suppressor PDCD4 directly interacts with ribosomes to repress translation.
Cell Res., 34, 2024
8VJN
DownloadVisualize
BU of 8vjn by Molmil
Myxococcus xanthus encapsulin cargo protein EncD in complex with flavin mononucleotide
分子名称: Encapsulin nanocompartment cargo protein EncD, FLAVIN MONONUCLEOTIDE
著者Eren, E.
登録日2024-01-07
公開日2024-05-08
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Myxococcus xanthus encapsulin cargo protein EncD is a flavin-binding protein with ferric reductase activity.
Proc.Natl.Acad.Sci.USA, 121, 2024
9EVX
DownloadVisualize
BU of 9evx by Molmil
cryoEM structure of Photosystem II averaged across S2-S3 states at 1.71 Angstrom resolution
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Hussein, R, Graca, A, Zouni, A, Messinger, J, Schroder, W.P.
登録日2024-04-02
公開日2024-06-12
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (1.71 Å)
主引用文献Cryo-electron microscopy reveals hydrogen positions and water networks in photosystem II.
Science, 384, 2024
9BHS
DownloadVisualize
BU of 9bhs by Molmil
Crystal structure of the WDR domain of human DCAF1 in complex with OICR-9939 compound
分子名称: (4P)-N-[(1S)-3-amino-1-(3-chloro-4-fluorophenyl)-3-oxopropyl]-4-(4-chloro-2-fluorophenyl)-5-(1-methyl-1H-pyrazol-4-yl)-1H-pyrrole-3-carboxamide, DDB1- and CUL4-associated factor 1, UNKNOWN LIGAND
著者kimani, S, Dong, A, Li, Y, Seitova, A, Al-Awar, R, Wilson, B, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2024-04-21
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Crystal structure of the WDR domain of human DCAF1 in complex with OICR-9939 compound
To be published
9F8X
DownloadVisualize
BU of 9f8x by Molmil
Low-dose structure of Marinobacter nauticus nitrous oxide reductase
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Einsle, O, Pomowski, A.
登録日2024-05-07
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.498 Å)
主引用文献Revisiting the metal sites of nitrous oxide reductase in a low-dose structure from Marinobacter nauticus.
J.Biol.Inorg.Chem., 29, 2024
8WBM
DownloadVisualize
BU of 8wbm by Molmil
Crystal structure of cis-Epoxysuccinate Hydrolases RhCESH[L] mutant D193A complexed with sulfate ions
分子名称: Epoxide hydrolase, SULFATE ION
著者Dong, S, Xuan, J.S, Feng, Y.G, Cui, Q.
登録日2023-09-10
公開日2024-01-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Deciphering the stereo-specific catalytic mechanisms of cis-epoxysuccinate hydrolases producing L(+)-tartaric acid.
J.Biol.Chem., 300, 2024
9C47
DownloadVisualize
BU of 9c47 by Molmil
TRRAP module of the human TIP60 complex
分子名称: E1A-binding protein p400, Transformation/transcription domain-associated protein
著者Yang, Z, Mameri, A, Florez Ariza, A.J, Cote, J, Nogales, E.
登録日2024-06-03
公開日2024-08-14
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into the human NuA4/TIP60 acetyltransferase and chromatin remodeling complex.
Science, 2024
8VQZ
DownloadVisualize
BU of 8vqz by Molmil
Crystal Structure of Betaine aldehyde dehydrogenase (BetB) from Klebsiella aerogenes (CMP bound)
分子名称: Betaine aldehyde dehydrogenase, CYTIDINE-5'-MONOPHOSPHATE, PHOSPHATE ION, ...
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-01-19
公開日2024-01-31
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal Structure of Betaine aldehyde dehydrogenase (BetB) from Klebsiella aerogenes (CMP bound)
To be published
8VJO
DownloadVisualize
BU of 8vjo by Molmil
Cryo-EM structure of Myxococcus xanthus EncA encapsulin shell loaded with EncD cargo
分子名称: EncA, Encapsulin nanocompartment cargo protein EncD
著者Eren, E.
登録日2024-01-07
公開日2024-05-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Myxococcus xanthus encapsulin cargo protein EncD is a flavin-binding protein with ferric reductase activity.
Proc.Natl.Acad.Sci.USA, 121, 2024
8WT1
DownloadVisualize
BU of 8wt1 by Molmil
Crystal structure of S9 carboxypeptidase from Geobacillus sterothermophilus
分子名称: ALANINE, CITRATE ANION, GLYCEROL, ...
著者Chandravanshi, K, Kumar, A, Sen, C, Singh, R, Bhange, G.B, Makde, R.D.
登録日2023-10-17
公開日2024-03-13
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and solution scattering of Geobacillus stearothermophilus S9 peptidase reveal structural adaptations for carboxypeptidase activity.
Febs Lett., 598, 2024
9EPV
DownloadVisualize
BU of 9epv by Molmil
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC333
分子名称: 1,2-ETHANEDIOL, 5-[[2-[(3-chloranyl-4-phenyl-phenyl)methylamino]-7-azaspiro[3.5]nonan-7-yl]sulfonyl]-1,3-dimethyl-benzimidazol-2-one, Casein kinase II subunit alpha, ...
著者Kraemer, A, Greco, F, Knapp, S, Structural Genomics Consortium (SGC)
登録日2024-03-20
公開日2024-05-01
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Synthesis and evaluation of chemical linchpins for highly selective CK2 alpha targeting.
Eur.J.Med.Chem., 276, 2024
9BQV
DownloadVisualize
BU of 9bqv by Molmil
DdmD dimer apoprotein
分子名称: Helicase/UvrB N-terminal domain-containing protein
著者Bravo, J.P.K, Taylor, D.W.
登録日2024-05-10
公開日2024-07-03
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Plasmid targeting and destruction by the DdmDE bacterial defence system.
Nature, 630, 2024
9LYZ
DownloadVisualize
BU of 9lyz by Molmil
X-RAY CRYSTALLOGRAPHY OF THE BINDING OF THE BACTERIAL CELL WALL TRISACCHARIDE NAM-NAG-NAM TO LYSOZYME
分子名称: HEN EGG WHITE LYSOZYME, N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid
著者Kelly, J.A, James, M.N.G.
登録日1979-12-06
公開日1980-02-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献X-ray crystallography of the binding of the bacterial cell wall trisaccharide NAM-NAG-NAM to lysozyme.
Nature, 282, 1979
9BRA
DownloadVisualize
BU of 9bra by Molmil
Intact V-ATPase State 2 and synaptophysin complex in mouse brain isolated synaptic vesicles
分子名称: Renin receptor cytoplasmic fragment, Ribonuclease kappa, Synaptophysin, ...
著者Wang, C, Jiang, W, Yang, K, Wang, X, Guo, Q, Brunger, A.T.
登録日2024-05-11
公開日2024-06-19
最終更新日2024-08-07
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structure and topography of the synaptic V-ATPase-synaptophysin complex.
Nature, 631, 2024
8Z61
DownloadVisualize
BU of 8z61 by Molmil
Human beta-catenin crystal structure
分子名称: Catenin beta-1
著者Tim, F.
登録日2024-04-18
公開日2024-05-08
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Discovery of Novel 1-Phenylpiperidine Urea-Containing Derivatives Inhibiting beta-Catenin/BCL9 Interaction and Exerting Antitumor Efficacy through the Activation of Antigen Presentation of cDC1 Cells.
J.Med.Chem., 67, 2024

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon