PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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3C84	Crystal structure of a complex of AChBP from aplysia californica and the neonicotinoid thiacloprid 分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, Soluble acetylcholine receptor, ... 著者 Talley, T.T, Harel, M, Hibbs, R.E, Tomizawa, M, Casida, J.E, Taylor, P.W. 登録日 2008-02-08 公開日 2008-05-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Atomic interactions of neonicotinoid agonists with AChBP: molecular recognition of the distinctive electronegative pharmacophore. Proc.Natl.Acad.Sci.Usa, 105, 2008
6FR9	F11 T-Cell Receptor Recognising PKYVKQNTLKLAT Peptide Presented by HLA-DR*0101 分子名称: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ... 著者 Rizkallah, P.J, Cole, D.K. 登録日 2018-02-15 公開日 2018-04-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility. Front Immunol, 9, 2018
5D5F	In meso in situ serial X-ray crystallography structure of lysozyme by bromine-SAD at 100 K 分子名称: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ACETIC ACID, BROMIDE ION, ... 著者 Huang, C.-Y, Olieric, V, Diederichs, K, Wang, M, Caffrey, M. 登録日 2015-08-10 公開日 2016-01-13 最終更新日 2016-03-02 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 In meso in situ serial X-ray crystallography of soluble and membrane proteins at cryogenic temperatures. Acta Crystallogr D Struct Biol, 72, 2016
3SG7	Crystal Structure of GCaMP3-KF(linker 1) 分子名称: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ... 著者 Schreiter, E.R, Akerboom, J, Looger, L.L. 登録日 2011-06-14 公開日 2012-06-20 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Optimization of a GCaMP calcium indicator for neural activity imaging. J.Neurosci., 32, 2012
5EKU	Crystal Structure of Trypanosoma Brucei Protein Arginine Methyltransferase PRMT7 in complex with S-Adenosyl-L-homocysteine 分子名称: Arginine N-methyltransferase, putative, S-ADENOSYL-L-HOMOCYSTEINE 著者 Debler, E.W, Stavropoulos, P. 登録日 2015-11-04 公開日 2016-05-18 最終更新日 2017-11-01 実験手法 X-RAY DIFFRACTION (2.801 Å) 主引用文献 A glutamate/aspartate switch controls product specificity in a protein arginine methyltransferase. Proc.Natl.Acad.Sci.USA, 113, 2016
4AK8	Structure of F241L mutant of langerin carbohydrate recognition domain. 分子名称: C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER K, CALCIUM ION, CHLORIDE ION, ... 著者 Chabrol, E, Thepaut, M, Dezutter-Dambuyant, C, Vives, C, Marcoux, J, Kahn, R, Valadeau-Guilemond, J, Vachette, P, Durand, D, Fieschi, F. 登録日 2012-02-22 公開日 2013-04-03 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Alteration of the Langerin Oligomerization State Affects Birbeck Granule Formation. Biophys.J., 108, 2015
4AKY	CRYSTAL STRUCTURE OF VIRB8 FROM BRUCELLA SUIS IN COMPLEX WITH INTERACTION INHIBITOR 2-(butylamino)-8-quinolinol 分子名称: 2-(butylamino)quinolin-8-ol, TYPE IV SECRETION SYSTEM PROTEIN VIRB8 著者 Coincon, M, Smith, M.A, Sygusch, J, Baron, C. 登録日 2012-02-29 公開日 2012-09-05 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Identification of the Binding Site of Brucella Virb8 Interaction Inhibitors. Chem.Biol., 19, 2012
6FR4	003 TCR Study of CDR Loop Flexibility 分子名称: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ... 著者 Rizkallah, P.J, Cole, D.K. 登録日 2018-02-15 公開日 2018-04-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.28 Å) 主引用文献 In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility. Front Immunol, 9, 2018
6GRZ	Crystal structure of the light chain dimer mH6 分子名称: GLYCEROL, mH6 著者 Maritan, M, Ricagno, S, Ambrosetti, A, Oberti, L. 登録日 2018-06-13 公開日 2019-06-12 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Inherent Biophysical Properties Modulate the Toxicity of Soluble Amyloidogenic Light Chains J.Mol.Biol., 2020
3J9T	Yeast V-ATPase state 1 分子名称: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ... 著者 Zhao, J, Benlekbir, S, Rubinstein, J.L. 登録日 2015-02-23 公開日 2015-05-13 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (6.9 Å) 主引用文献 Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase. Nature, 521, 2015
6GSB	Sphingobacterium sp. T2 manganese superoxide dismutase catalyses the oxidative demethylation of polymeric lignin via generation of hydroxyl radical 分子名称: MANGANESE (II) ION, Superoxide dismutase 著者 Rashid, G.M, Zhang, X, Wilkinson, R.C, Fulop, V, Cottyn, B, Baumberger, S, Bugg, D.H. 登録日 2018-06-13 公開日 2018-10-03 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Sphingobacterium sp. T2 Manganese Superoxide Dismutase Catalyzes the Oxidative Demethylation of Polymeric Lignin via Generation of Hydroxyl Radical. ACS Chem. Biol., 13, 2018
4ADU	Crystal structure of plasmodial PLP synthase with bound R5P intermediate 分子名称: 1,2-ETHANEDIOL, PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE, PUTATIVE, ... 著者 Guedez, G, Sinning, I, Tews, I. 登録日 2012-01-03 公開日 2012-01-25 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 Assembly of the Eukaryotic Plp-Synthase Complex from Plasmodium and Activation of the Pdx1 Enzyme. Structure, 20, 2012
5EE4	The crystal structure of HpuA from Kingella denitrificans in complex with human haemoglobin 分子名称: GLYCEROL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ... 著者 Wong, C.T, Hare, S.A. 登録日 2015-10-22 公開日 2015-11-04 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural analysis of haemoglobin binding by HpuA from the Neisseriaceae family. Nat Commun, 6, 2015
5D53	In meso in situ serial X-ray crystallography structure of insulin at 100 K 分子名称: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, Insulin A chain, Insulin B chain, ... 著者 Huang, C.-Y, Olieric, V, Diederichs, K, Wang, M, Caffrey, M. 登録日 2015-08-10 公開日 2016-01-13 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 In meso in situ serial X-ray crystallography of soluble and membrane proteins at cryogenic temperatures. Acta Crystallogr D Struct Biol, 72, 2016
3K80	Structure of essential protein from Trypanosoma brucei 分子名称: Antibody, MP18 RNA editing complex protein 著者 Wu, M. 登録日 2009-10-13 公開日 2010-11-17 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structures of a key interaction protein from the Trypanosoma brucei editosome in complex with single domain antibodies. J.Struct.Biol., 174, 2011
5D56	In meso in situ serial X-ray crystallography structure of diacylglycerol kinase, DgkA, at 100 K 分子名称: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, ACETATE ION, CITRATE ANION, ... 著者 Huang, C.-Y, Howe, N, Olieric, V, Warshamanage, R, Diederichs, K, Wang, M, Caffrey, M. 登録日 2015-08-10 公開日 2016-01-13 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 In meso in situ serial X-ray crystallography of soluble and membrane proteins at cryogenic temperatures. Acta Crystallogr D Struct Biol, 72, 2016
5D5B	In meso X-ray crystallography structure of the Beta2-adrenergic receptor at 100 K 分子名称: (2S)-1-(9H-Carbazol-4-yloxy)-3-(isopropylamino)propan-2-ol, 1,4-BUTANEDIOL, ACETAMIDE, ... 著者 Huang, C.-Y, Olieric, V, Liu, X, Kobilka, B, Wang, M, Caffrey, M. 登録日 2015-08-10 公開日 2016-01-13 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 In meso in situ serial X-ray crystallography of soluble and membrane proteins at cryogenic temperatures. Acta Crystallogr D Struct Biol, 72, 2016
3J7M	Virus model of brome mosaic virus (first half data set) 分子名称: Capsid protein 著者 Wang, Z, Hryc, C, Bammes, B, Afonine, P.V, Jakana, J, Chen, D.H, Liu, X, Baker, M.L, Kao, C, Ludtke, S.J, Schmid, M.F, Adams, P.D, Chiu, W. 登録日 2014-07-18 公開日 2014-09-10 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 An atomic model of brome mosaic virus using direct electron detection and real-space optimization. Nat Commun, 5, 2014
3J7G	Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments 分子名称: L1 著者 Lee, H, Hafenstein, S. 登録日 2014-06-24 公開日 2014-11-26 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (13.6 Å) 主引用文献 A cryo-electron microscopy study identifies the complete H16.V5 epitope and reveals global conformational changes initiated by binding of the neutralizing antibody fragment. J.Virol., 89, 2015
4AEQ	Crystal structure of the dimeric immunity protein Cmi solved by direct methods (Arcimboldo) 分子名称: COLICIN-M IMMUNITY PROTEIN, PHOSPHATE ION 著者 Zeth, K, Patzer, S.I, Albrecht, R, Uson, I, Braun, V. 登録日 2012-01-12 公開日 2012-01-25 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.892 Å) 主引用文献 The Crystal Structure of the Dimeric Colicin M Immunity J.Struct.Biol., 178, 2012
3J7W	Capsid Expansion Mechanism Of Bacteriophage T7 Revealed By Multi-State Atomic Models Derived From Cryo-EM Reconstructions 分子名称: Major capsid protein 10A 著者 Guo, F, Liu, Z, Fang, P.A, Zhang, Q, Wright, E.T, Wu, W, Zhang, C, Vago, F, Ren, Y, Jakata, J, Chiu, W, Serwer, P, Jiang, W. 登録日 2014-08-12 公開日 2014-10-15 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Capsid expansion mechanism of bacteriophage T7 revealed by multistate atomic models derived from cryo-EM reconstructions. Proc.Natl.Acad.Sci.USA, 111, 2014
3OMJ	Structural Basis for Cyclic Py-Im Polyamide Allosteric Inhibition of Nuclear Receptor Binding 分子名称: (23R,52R)-23,52-diamino-5,11,17,28,34,40,46,57-octamethyl-2,5,8,11,14,17,20,25,28,31,34,37,40,43,46,49,54,57,60,64-icosaazanonacyclo[54.2.1.1~4,7~.1~10,13~.1~16,19~.1~27,30~.1~33,36~.1~39,42~.1~45,48~]hexahexaconta-1(58),4(66),6,10(65),12,16(64),18,27(63),29,33(62),35,39(61),41,45(60),47,56(59)-hexadecaene-3,9,15,21,26,32,38,44,50,55-decone, 5'-D(*CP*(C38)P*AP*GP*TP*AP*CP*TP*GP*G)-3', CALCIUM ION 著者 Chenoweth, D.M. 登録日 2010-08-27 公開日 2010-09-08 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (0.95 Å) 主引用文献 Structural basis for cyclic py-im polyamide allosteric inhibition of nuclear receptor binding. J.Am.Chem.Soc., 132, 2010
5CXK	Crystal structure of beta carbonic anhydrase from Vibrio cholerae 分子名称: BICARBONATE ION, Carbonic anhydrase, ZINC ION 著者 Ferraroni, M, Supuran, C. 登録日 2015-07-29 公開日 2015-12-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure and kinetic studies of a tetrameric type II beta-carbonic anhydrase from the pathogenic bacterium Vibrio cholerae. Acta Crystallogr.,Sect.D, 71, 2015
2BGF	NMR structure of Lys48-linked di-ubiquitin using chemical shift perturbation data together with RDCs and 15N-relaxation data 分子名称: DI-UBIQUITIN 著者 Van Dijk, A.D.J, Fushman, D, Bonvin, A.M.J.J. 登録日 2004-12-22 公開日 2005-08-31 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Various Strategies of Using Residual Dipolar Couplings in NMR-Driven Protein Docking: Application to Lys48-Linked Di-Ubiquitin and Validation Against 15N-Relaxation Data Proteins: Struct., Funct., Bioinf., 60, 2005
6FTG	Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes 分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... 著者 Pfeffer, S, Foerster, F. 登録日 2018-02-22 公開日 2018-03-21 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (9.1 Å) 主引用文献 Structural basis for coupling protein transport and N-glycosylation at the mammalian endoplasmic reticulum. Science, 360, 2018

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